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Spatial pattern gene: Pbx3 (spascer ID:18516) |
Gene summary for Pbx3 |
Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Pbx3 | Gene ID | 18516 |
| Gene name | pre B cell leukemia homeobox 3 |
| Synonyms | - |
| Cytomap | 2 B|2 22.84 cM |
| Type of gene | protein-coding |
| Description | pre-B-cell leukemia transcription factor 3homeobox protein PBX3 |
| Modification date | 20220424 |
| UniProtAcc | O35317 |
Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Pbx3 | GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 21873635 | Function |
| Pbx3 | GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | 21873635 | Function |
| Pbx3 | GO:0001654 | eye development | 21873635 | Process |
| Pbx3 | GO:0006357 | regulation of transcription by RNA polymerase II | 21873635 | Process |
| Pbx3 | GO:0007420 | brain development | 21873635 | Process |
| Pbx3 | GO:0009887 | animal organ morphogenesis | 21873635 | Process |
| Pbx3 | GO:0048568 | embryonic organ development | 21873635 | Process |
| Pbx3 | GO:0048666 | neuron development | 21873635 | Process |
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Spatial pattern events for Pbx3 |
spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Pbx3 | Mouse | Brain | S1 | 34413515 | 2.07e-15 |
| Pbx3 | Mouse | Brain | S2 | 34413515 | 1.56e-15 |
| Pbx3 | Mouse | Brain | S3 | 34413515 | 1.64e-15 |
| Pbx3 | Mouse | Brain | S4 | 34413515 | 1.37e-15 |
| Pbx3 | Mouse | Brain | S6 | 34413515 | 1.46e-15 |
| Pbx3 | Mouse | Brain | S7 | 34413515 | 1.55e-15 |
| Pbx3 | Mouse | Brain | 01A | 32637622 | 2.14e-10 |
| Pbx3 | Mouse | Brain | 01B | 32637622 | 9.29e-14 |
| Pbx3 | Mouse | Brain | 04A | 32637622 | 9.48e-06 |
| Pbx3 | Mouse | Brain | 04B | 32637622 | 6.54e-09 |
| Pbx3 | Mouse | Brain | 05A | 32637622 | 4.78e-14 |
| Pbx3 | Mouse | Brain | 05B | 32637622 | 4.48e-14 |
| Pbx3 | Mouse | Brain | 06A | 32637622 | 2.13e-08 |
| Pbx3 | Mouse | Brain | 06B | 32637622 | 1.68e-14 |
| Pbx3 | Mouse | Brain | 07A | 32637622 | 3.98e-11 |
| Pbx3 | Mouse | Brain | 07B | 32637622 | 1.82e-14 |
| Pbx3 | Mouse | Brain | 08A | 32637622 | 1.03e-11 |
| Pbx3 | Mouse | Brain | 08B | 32637622 | 5.71e-14 |
| Pbx3 | Mouse | Brain | 09A | 32637622 | 9.89e-11 |
| Pbx3 | Mouse | Brain | 09B | 32637622 | 1.34e-12 |
| Pbx3 | Mouse | Brain | 10B | 32637622 | 2.29e-08 |
| Pbx3 | Mouse | Brain | 12A | 32637622 | 6.35e-06 |
| Pbx3 | Mouse | Brain | 12B | 32637622 | 9.11e-09 |
| Pbx3 | Mouse | Brain | 13B | 32637622 | 1.07e-06 |
| Pbx3 | Mouse | Brain | 14A | 32637622 | 4.32e-08 |
| Pbx3 | Mouse | Brain | 14B | 32637622 | 1.35e-14 |
| Pbx3 | Mouse | Brain | 15A | 32637622 | 4.86e-11 |
| Pbx3 | Mouse | Brain | 17B | 32637622 | 9.61e-06 |
| Pbx3 | Mouse | Brain | 19A | 32637622 | 4.00e-11 |
| Pbx3 | Mouse | Brain | 19B | 32637622 | 7.19e-06 |
| Pbx3 | Mouse | Brain | 26A | 32637622 | 2.20e-14 |
| Pbx3 | Mouse | Brain | 26B | 32637622 | 3.61e-10 |
| Pbx3 | Mouse | Brain | 27A | 32637622 | 1.03e-14 |
| Pbx3 | Mouse | Brain | 27B | 32637622 | 1.06e-14 |
| Pbx3 | Mouse | Brain | 28A | 32637622 | 1.06e-14 |
| Pbx3 | Mouse | Brain | 28B | 32637622 | 2.54e-13 |
| Pbx3 | Mouse | Brain | 29A | 32637622 | 1.08e-14 |
| Pbx3 | Mouse | Brain | 29B | 32637622 | 1.08e-14 |
| Pbx3 | Mouse | Brain | 30A | 32637622 | 5.45e-13 |
| Pbx3 | Mouse | Brain | 31A | 32637622 | 2.04e-10 |
| Pbx3 | Mouse | Brain | 32A | 32637622 | 6.90e-13 |
| Pbx3 | Mouse | Brain | 33A | 32637622 | 1.50e-14 |
| Pbx3 | Mouse | Brain | 33B | 32637622 | 2.38e-10 |
| Pbx3 | Mouse | Brain | 34A | 32637622 | 4.09e-07 |
| Pbx3 | Mouse | Brain | 34B | 32637622 | 8.35e-07 |
| Pbx3 | Mouse | Brain | 35A | 32637622 | 6.31e-08 |
| Pbx3 | Mouse | Brain | rep_1 | 35141374 | 2.02e-15 |
| Pbx3 | Mouse | Brain | rep_2 | 35141374 | 1.69e-15 |
| Pbx3 | Mouse | Brain | rep_3 | 35141374 | 1.64e-15 |
| Pbx3 | Mouse | Brain | rep_4 | 35141374 | 1.57e-15 |
| Pbx3 | Mouse | Brain | rep_5 | 35141374 | 1.47e-15 |
| Pbx3 | Mouse | Brain | rep_6 | 35141374 | 1.73e-15 |
| Pbx3 | Mouse | Embryo | 1G | 34210887 | 1.44e-07 |
| Pbx3 | Mouse | Embryo | 3D | 34210887 | 2.57e-09 |
| Pbx3 | Mouse | Embryo | 3F | 34210887 | 4.26e-11 |
| Pbx3 | Mouse | Embryo | 3G | 34210887 | 3.82e-10 |
| Pbx3 | Mouse | Embryo | 4D | 34210887 | 3.20e-11 |
| Pbx3 | Mouse | Embryo | 4E | 34210887 | 4.53e-15 |
| Pbx3 | Mouse | Embryo | rep_2 | 33188776 | 1.97e-14 |
| Pbx3 | Mouse | Embryo | rep_3 | 33188776 | 1.81e-14 |
| Pbx3 | Mouse | Embryo | rep_4 | 33188776 | 1.53e-14 |
| Pbx3 | Mouse | Embryo | rep_5 | 33188776 | 1.49e-06 |
| Pbx3 | Mouse | Embryo | rep_7 | 33188776 | 4.39e-13 |
| Pbx3 | Mouse | Embryo | rep_13 | 33188776 | 7.90e-15 |
| Pbx3 | Mouse | Kidney | Sham | 34003797 | 8.32e-12 |
| Pbx3 | Mouse | Brain | rep_1 | 33469025 | 1.30e-15 |
| Pbx3 | Mouse | Brain | rep_1 | 35027729 | 1.66e-15 |
| Pbx3 | Mouse | Brain | rep_2 | 35027729 | 1.57e-15 |
| Pbx3 | Mouse | Brain | rep_3 | 35027729 | 1.32e-15 |
| Pbx3 | Mouse | Brain | rep_4 | 35027729 | 1.76e-15 |
| Pbx3 | Mouse | Brain | rep_5 | 35027729 | 1.46e-15 |
| Pbx3 | Mouse | Intestine | rep_2 | 35149721 | 1.00e-14 |
| Pbx3 | Mouse | Brain | B02_E1 | 32702314 | 1.67e-09 |
| Pbx3 | Mouse | Brain | B03_D2 | 32702314 | 1.46e-09 |
| Pbx3 | Mouse | Brain | N03_D2 | 32702314 | 1.38e-14 |
| Pbx3 | Mouse | Brain | N04_D1 | 32702314 | 4.62e-07 |
| Pbx3 | Mouse | Lung | rep_2 | 35290801 | 7.28e-07 |
| Pbx3 | Mouse | Brain | OFB_ad_rep1 | 33083725 | 1.83e-03 |
| Pbx3 | Mouse | Brain | OFB_ad_rep2 | 33083725 | 3.99e-03 |
| Pbx3 | Mouse | Brain | OFB_ad_rep3 | 33083725 | 9.18e-08 |
| Pbx3 | Mouse | Brain | OFB_ad_rep4 | 33083725 | 2.14e-11 |
| Pbx3 | Mouse | Brain | OFB_adpolb_rep1 | 33083725 | 3.10e-05 |
| Pbx3 | Mouse | Brain | OFB_adpolb_rep2 | 33083725 | 1.25e-12 |
| Pbx3 | Mouse | Brain | OFB_adpolb_rep3 | 33083725 | 4.53e-09 |
| Pbx3 | Mouse | Brain | OFB_adpolb_rep4 | 33083725 | 4.74e-13 |
| Pbx3 | Mouse | Brain | OFB_adpolb_rep5 | 33083725 | 1.06e-02 |
| Pbx3 | Mouse | Brain | OFB_adpolb_rep6 | 33083725 | 2.27e-03 |
| Pbx3 | Mouse | Brain | OFB_polb_rep5 | 33083725 | 2.19e-04 |
| Pbx3 | Mouse | Brain | OFB_polb_rep7 | 33083725 | 1.26e-06 |
| Pbx3 | Mouse | Brain | OFB_polb_rep8 | 33083725 | 7.19e-05 |
| Pbx3 | Mouse | Brain | OFB_wt_rep1 | 33083725 | 4.24e-06 |
| Pbx3 | Mouse | Brain | OFB_wt_rep2 | 33083725 | 4.85e-04 |
| Pbx3 | Mouse | Brain | OFB_wt_rep3 | 33083725 | 3.84e-04 |
| Pbx3 | Mouse | Brain | OFB_wt_rep4 | 33083725 | 1.56e-02 |
| Pbx3 | Mouse | Brain | OFB_wt_rep5 | 33083725 | 8.35e-04 |
spatial pattern gene map.(click to enlarge the image in a new window) |
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Spatial pattern pathway has Pbx3 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| Pbx3 | GOBP_Animal_Organ_Morphogenesis | Mouse | Spinal cord | CN94_E1 | 6.6e-06 |
| Pbx3 | GOBP_Regionalization | Mouse | Spinal cord | CN94_E1 | 7.3e-06 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Spinal cord | CN94_E1 | 4.5e-06 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Spinal cord | L7CN45_C1 | 5.5e-10 |
| Pbx3 | GOBP_Embryo_Development | Mouse | Spinal cord | L7CN45_C1 | 3.4e-09 |
| Pbx3 | GOBP_Embryonic_Organ_Development | Mouse | Spinal cord | L7CN45_C1 | 5.1e-08 |
| Pbx3 | GOBP_Head_Development | Mouse | Spinal cord | L7CN45_C1 | 3.4e-09 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Spinal cord | L7CN45_C1 | 3.4e-09 |
| Pbx3 | GOBP_Neuron_Development | Mouse | Spinal cord | L7CN45_C1 | 5.6e-08 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Spinal cord | L7CN45_C1 | 3.4e-09 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Spinal cord | L7CN45_C1 | 2.2e-09 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Spinal cord | L7CN45_C1 | 3.4e-08 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Spinal cord | L8CN17_E1 | 2.7e-06 |
| Pbx3 | GOBP_Animal_Organ_Morphogenesis | Mouse | Brain | rep_27 | 2.0e-06 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Brain | rep_27 | 3.1e-05 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Brain | rep_27 | 3.2e-09 |
| Pbx3 | GOBP_Regionalization | Mouse | Brain | rep_27 | 3.9e-08 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Brain | rep_27 | 4.9e-05 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Brain | rep_27 | 1.2e-05 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Brain | rep_1 | 8.6e-30 |
| Pbx3 | GOBP_Head_Development | Mouse | Brain | rep_1 | 3.9e-29 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Brain | rep_1 | 6.4e-19 |
| Pbx3 | GOBP_Neuron_Development | Mouse | Brain | rep_1 | 3.8e-29 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Brain | rep_1 | 8.7e-25 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Brain | rep_1 | 1.6e-12 |
| Pbx3 | GOBP_Animal_Organ_Morphogenesis | Mouse | Brain | rep_3 | 5.4e-57 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Brain | rep_3 | 1.2e-140 |
| Pbx3 | GOBP_Embryo_Development | Mouse | Brain | rep_3 | 1.3e-126 |
| Pbx3 | GOBP_Embryonic_Organ_Development | Mouse | Brain | rep_3 | 4.3e-190 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Brain | rep_3 | 1.6e-118 |
| Pbx3 | GOBP_Regionalization | Mouse | Brain | rep_3 | 1.3e-180 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Brain | rep_3 | 1.6e-123 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Embryo | rep_6 | 1.5e-09 |
| Pbx3 | GOBP_Animal_Organ_Morphogenesis | Mouse | Embryo | rep_1 | 1.7e-10 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Embryo | rep_1 | 3.0e-261 |
| Pbx3 | GOBP_Head_Development | Mouse | Embryo | rep_1 | 1.8e-91 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Embryo | rep_1 | 8.2e-08 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Embryo | rep_1 | 1.3e-72 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Embryo | rep_2 | 8.6e-166 |
| Pbx3 | GOBP_Neuron_Development | Mouse | Embryo | rep_2 | 4.8e-18 |
| Pbx3 | GOBP_Regionalization | Mouse | Embryo | rep_2 | 5.4e-84 |
| Pbx3 | GOBP_Embryo_Development | Mouse | Embryo | rep_3 | 1.2e-173 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Embryo | rep_3 | 2.1e-193 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Embryo | rep_3 | 2.8e-168 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Embryo | rep_3 | 2.1e-266 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Kidney | Nep | 4.2e-26 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Kidney | Nep | 4.6e-22 |
| Pbx3 | GOBP_Neuron_Development | Mouse | Kidney | Nep | 8.3e-23 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Kidney | Nep | 8.3e-23 |
| Pbx3 | GOBP_Animal_Organ_Morphogenesis | Mouse | Kidney | rep_2 | 4.2e-71 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Kidney | rep_2 | 3.0e-23 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Kidney | rep_2 | 1.3e-23 |
| Pbx3 | GOBP_Embryo_Development | Mouse | Kidney | rep_2 | 7.4e-46 |
| Pbx3 | GOBP_Embryonic_Organ_Development | Mouse | Kidney | rep_2 | 1.3e-60 |
| Pbx3 | GOBP_Head_Development | Mouse | Kidney | rep_2 | 1.9e-29 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Kidney | rep_2 | 2.4e-78 |
| Pbx3 | GOBP_Neuron_Development | Mouse | Kidney | rep_2 | 1.3e-42 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Kidney | rep_2 | 3.9e-32 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Kidney | rep_2 | 2.3e-36 |
| Pbx3 | GOBP_Regionalization | Mouse | Kidney | rep_2 | 2.1e-25 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Kidney | rep_2 | 4.7e-27 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Kidney | rep_2 | 7.2e-08 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Liver | CN16-D2 | 5.1e-07 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Liver | rep_16 | 8.2e-15 |
| Pbx3 | GOBP_Head_Development | Mouse | Liver | rep_16 | 4.3e-18 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Liver | rep_16 | 3.6e-20 |
| Pbx3 | GOBP_Regionalization | Mouse | Liver | rep_16 | 1.2e-11 |
| Pbx3 | GOBP_Animal_Organ_Morphogenesis | Mouse | Lymph | MS-1 | 4.4e-09 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Lymph | MS-1 | 3.8e-07 |
| Pbx3 | GOBP_Embryo_Development | Mouse | Lymph | MS-1 | 2.5e-08 |
| Pbx3 | GOBP_Embryonic_Organ_Development | Mouse | Lymph | MS-1 | 1.1e-11 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Lymph | MS-1 | 4.1e-08 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Lymph | MS-1 | 3.9e-12 |
| Pbx3 | GOBP_Regionalization | Mouse | Lymph | MS-1 | 2.7e-12 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Lymph | MS-1 | 1.5e-10 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Lymph | MS-1 | 1.2e-07 |
| Pbx3 | GOBP_Regionalization | Mouse | Brain | rep_4 | 6.3e-07 |
| Pbx3 | GOBP_Embryonic_Organ_Development | Mouse | Brain | rep_7 | 7.0e-07 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Brain | rep_7 | 1.0e-12 |
| Pbx3 | GOBP_Central_Nervous_System_Development | Mouse | Brain | HP_ad_rep7 | 2.3e-07 |
| Pbx3 | GOBP_Head_Development | Mouse | Brain | HP_ad_rep7 | 3.0e-07 |
| Pbx3 | GOBP_Neurogenesis | Mouse | Brain | HP_ad_rep7 | 3.9e-07 |
| Pbx3 | GOBP_Neuron_Development | Mouse | Brain | HP_ad_rep7 | 3.9e-07 |
| Pbx3 | GOBP_Neuron_Differentiation | Mouse | Brain | HP_ad_rep7 | 3.9e-07 |
| Pbx3 | GOBP_Pattern_Specification_Process | Mouse | Brain | HP_ad_rep7 | 2.1e-10 |
| Pbx3 | GOBP_Regionalization | Mouse | Brain | HP_ad_rep7 | 2.8e-09 |
| Pbx3 | GOBP_Sensory_Organ_Development | Mouse | Brain | HP_ad_rep7 | 4.6e-10 |
| Pbx3 | GOBP_Sensory_System_Development | Mouse | Brain | HP_ad_rep7 | 1.6e-11 |
| Pbx3 | GOBP_Anterior_Posterior_Pattern_Specification | Mouse | Brain | HP_adpolb_rep1 | 3.0e-08 |
| Pbx3 | GOBP_Embryo_Development | Mouse | Brain | HP_polb_rep9 | 1.5e-10 |
| Pbx3 | GOBP_Embryonic_Organ_Development | Mouse | Brain | HP_polb_rep9 | 9.6e-11 |
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Pbx3 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Pbx3 function as liang/receptor across spatial transcriptomics tissue |
Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication | ||
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Transcription factor for Pbx3 envolved |
Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| PBX3 | Intestine | development | Epithelium | FBLN1,OGN,DCN, etc. | 0.378 |
| PBX3 | Intestine | development | Fibroblasts | FBLN1,OGN,DCN, etc. | 0.47 |
| PBX3 | Intestine | development | MyoFibroblasts | FBLN1,OGN,DCN, etc. | 0.295 |
| PBX3 | Intestine | development | Neural | FBLN1,OGN,DCN, etc. | 0.256 |
| Pbx3 | Kidney | Sham | CNT | Nt5dc2,Pdp1,Pnrc1, etc. | 0.411 |
| Pbx3 | Kidney | Sham | CD_IC | Nt5dc2,Pdp1,Pnrc1, etc. | 0.272 |
| Pbx3 | Kidney | Sham | TAL | Nt5dc2,Pdp1,Pnrc1, etc. | 0.328 |
Motif information. |
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Related Drugs for Pbx3 |
Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Pbx3 |
Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |