SPASCER Logo

Home

Download & Upload

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Spatial pattern gene: Oat (spascer ID:18242)

Gene summary for Oat

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Oat

Gene ID

18242

Gene nameornithine aminotransferase
SynonymsAI194874|rhg
Cytomap7 F3|7 76.3 cM
Type of geneprotein-coding
Descriptionornithine aminotransferase, mitochondrialornithine--oxo-acid aminotransferase
Modification date20220424
UniProtAcc

P29758


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Oat

GO:0004587

ornithine-oxo-acid transaminase activity

21873635

Function
Oat

GO:0005737

cytoplasm

21873635

Component
Oat

GO:0010121

arginine catabolic process to proline via ornithine

21873635

Process
Oat

GO:0019544

arginine catabolic process to glutamate

21873635

Process
Oat

GO:0030170

pyridoxal phosphate binding

21873635

Function
Oat

GO:0042802

identical protein binding

21873635

Function

Top

Spatial pattern events for Oat

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
OatMouseBrainS1 344135151.46e-09
OatMouseBrainS2 344135151.56e-15
OatMouseBrainS3 344135153.90e-14
OatMouseBrainS4 344135151.37e-15
OatMouseBrainS6 344135152.66e-15
OatMouseBrainS7 344135152.85e-15
OatMouseBrain28B 326376221.43e-07
OatMouseBrainrep_1 351413747.58e-10
OatMouseBrainrep_2 351413743.62e-10
OatMouseBrainrep_3 351413741.64e-15
OatMouseBrainrep_4 351413741.87e-06
OatMouseBrainrep_5 351413741.37e-09
OatMouseBrainrep_6 351413741.73e-15
OatMouseEmbryo4E 342108872.51e-07
OatMouseKidneyCLP 340037972.19e-15
OatMouseKidneyIRI 340037974.96e-09
OatMouseKidneySham 340037972.58e-15
OatMouseKidneyrep_1 348531512.42e-15
OatMouseKidneyrep_3 348531511.42e-08
OatMouseKidneyrep_4 348531514.07e-15
OatMouseKidneyrep_5 348531513.44e-07
OatMouseBrainrep_1 334690251.34e-09
OatMouseLiverrep_14 350210632.99e-14
OatMouseLiverrep_15 350210635.25e-14
OatMouseLiverrep_16 350210634.56e-14
OatMouseLiverrep_17 350210632.97e-14
OatMouseLiverrep_18 350210631.27e-13
OatMouseLiverrep_19 350210637.25e-14
OatMouseLiverrep_20 350210639.91e-15
OatMouseLiverrep_21 350210638.03e-15
OatMouseLiverrep_22 350210631.07e-14
OatMouseLiverrep_23 350210631.39e-14
OatMouseIntestinerep_1 351497216.08e-15
OatMouseIntestinerep_2 351497213.44e-15
OatMouseIntestinerep_3 351497213.25e-15
OatMouseIntestinerep_4 351497213.90e-15
OatMouseLungrep_1 352908011.09e-12
OatMouseLungrep_2 352908018.75e-15
OatMouseLungrep_3 352908012.48e-09
OatMouseLungrep_4 352908013.04e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Brain_rep_1_H&E
boxplot

boxplot
Brain_rep_2_H&E
boxplot

boxplot
Brain_rep_3_H&E
boxplot

boxplot
Brain_rep_4_H&E
boxplot

boxplot
Brain_rep_5_H&E
boxplot

boxplot
Brain_rep_6_H&E
boxplot

boxplot
Kidney_CLP_H&E
boxplot

boxplot
Kidney_IRI_H&E
boxplot

boxplot
Kidney_Sham_H&E
boxplot

boxplot
Kidney_rep_1_H&E
boxplot

boxplot
Kidney_rep_3_H&E
boxplot

boxplot
Kidney_rep_4_H&E
boxplot

boxplot
Kidney_rep_5_H&E
boxplot

boxplot
Brain_rep_1_H&E
boxplot
Liver_rep_14_H&E
boxplot
Liver_rep_15_H&E
boxplot
Liver_rep_16_H&E
boxplot
Liver_rep_17_H&E
boxplot
Liver_rep_18_H&E
boxplot
Liver_rep_19_H&E
boxplot
Liver_rep_20_H&E
boxplot
Liver_rep_21_H&E
boxplot
Liver_rep_22_H&E
boxplot
Liver_rep_23_H&E
boxplot
Lung_rep_1_H&E
boxplot

boxplot
Lung_rep_2_H&E
boxplot

boxplot
Lung_rep_3_H&E
boxplot

boxplot
Lung_rep_4_H&E
boxplot

boxplot


Top

Spatial pattern pathway has Oat envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseSpinal cordCN94_E1 7.7e-07
OatGOBP_Organic_Acid_Catabolic_ProcessMouseSpinal cordCN94_E1 3.5e-07
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseSpinal cordL7bCN02_E1 7.5e-07
OatGOBP_Nervous_System_ProcessMouseSpinal cordL7bCN02_E1 2.5e-06
OatGOBP_Organic_Acid_Metabolic_ProcessMouseSpinal cordL7bCN02_E1 7.1e-06
OatGOBP_Arginine_Metabolic_ProcessMouseSpinal cordL7CN44_C1 1.1e-07
OatGOBP_Arginine_Catabolic_ProcessMouseSpinal cordL7CN45_C1 1.5e-06
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseSpinal cordL7CN45_C1 5.8e-07
OatGOBP_Organonitrogen_Compound_Biosynthetic_ProcessMouseSpinal cordL7CN45_C1 5.6e-08
OatGOBP_Organonitrogen_Compound_Catabolic_ProcessMouseSpinal cordL7CN45_C1 5.1e-08
OatGOBP_Sensory_PerceptionMouseSpinal cordL7CN45_C1 5.0e-07
OatGOBP_Sensory_Perception_Of_Light_StimulusMouseSpinal cordL7CN45_C1 2.3e-08
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseSpinal cordL7CN45_C1 4.3e-07
OatGOBP_Small_Molecule_Catabolic_ProcessMouseSpinal cordL7CN45_C1 4.6e-07
OatGOBP_Small_Molecule_Metabolic_ProcessMouseSpinal cordL7CN45_C1 1.7e-07
OatGOBP_Proline_Metabolic_ProcessMouseSpinal cordL7CN45_E1 5.6e-07
OatGOBP_Glutamate_Metabolic_ProcessMouseSpinal cordL7CN47_C1 9.3e-06
OatGOBP_Glutamine_Family_Amino_Acid_Catabolic_ProcessMouseSpinal cordL7CN47_C1 6.8e-06
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseSpinal cordL7CN60_D1 5.3e-06
OatGOBP_Cellular_Amino_Acid_Catabolic_ProcessMouseSpinal cordL7CN60_D1 5.0e-06
OatGOBP_Glutamine_Family_Amino_Acid_Metabolic_ProcessMouseSpinal cordL8CN17_E1 2.7e-07
OatGOBP_Dicarboxylic_Acid_Metabolic_ProcessMouseBrainrep_11 1.9e-05
OatGOBP_Arginine_Metabolic_ProcessMouseBrainrep_33 1.0e-08
OatGOBP_Arginine_Catabolic_ProcessMouseBrainrep_37 1.5e-08
OatGOBP_Proline_Metabolic_ProcessMouseBrainrep_37 2.9e-11
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseBrainrep_71 7.6e-05
OatGOBP_Sensory_Perception_Of_Light_StimulusMouseBrainrep_71 5.8e-05
OatGOBP_Arginine_Catabolic_ProcessMouseBrainrep_1 8.3e-23
OatGOBP_Nervous_System_ProcessMouseBrainrep_1 1.6e-36
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseBrainrep_32.6e-126
OatGOBP_Alpha_Amino_Acid_Metabolic_ProcessMouseBrainrep_32.8e-178
OatGOBP_Arginine_Metabolic_ProcessMouseBrainrep_3 2.1e-44
OatGOBP_Cellular_Amino_Acid_Biosynthetic_ProcessMouseBrainrep_36.3e-192
OatGOBP_Cellular_Amino_Acid_Catabolic_ProcessMouseBrainrep_31.6e-133
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseBrainrep_38.5e-191
OatGOBP_Dicarboxylic_Acid_Metabolic_ProcessMouseBrainrep_31.2e-146
OatGOBP_Glutamate_Metabolic_ProcessMouseBrainrep_38.4e-127
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseBrainrep_33.7e-196
OatGOBP_Glutamine_Family_Amino_Acid_Catabolic_ProcessMouseBrainrep_31.4e-122
OatGOBP_Glutamine_Family_Amino_Acid_Metabolic_ProcessMouseBrainrep_36.4e-161
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseBrainrep_3 2.0e-17
OatGOBP_Organic_Acid_Catabolic_ProcessMouseBrainrep_39.6e-181
OatGOBP_Organic_Acid_Metabolic_ProcessMouseBrainrep_31.5e-154
OatGOBP_Organonitrogen_Compound_Biosynthetic_ProcessMouseBrainrep_32.9e-144
OatGOBP_Organonitrogen_Compound_Catabolic_ProcessMouseBrainrep_37.1e-166
OatGOBP_Proline_Metabolic_ProcessMouseBrainrep_32.8e-118
OatGOBP_Sensory_PerceptionMouseBrainrep_3 2.9e-57
OatGOBP_Sensory_Perception_Of_Light_StimulusMouseBrainrep_3 1.1e-51
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseBrainrep_31.1e-103
OatGOBP_Small_Molecule_Catabolic_ProcessMouseBrainrep_39.8e-142
OatGOBP_Small_Molecule_Metabolic_ProcessMouseBrainrep_3 2.7e-19
OatGOBP_Cellular_Amino_Acid_Biosynthetic_ProcessMouseEmbryorep_6 4.1e-27
OatGOBP_Dicarboxylic_Acid_Metabolic_ProcessMouseEmbryorep_6 7.1e-08
OatGOBP_Glutamate_Metabolic_ProcessMouseEmbryorep_6 1.2e-20
OatGOBP_Glutamine_Family_Amino_Acid_Catabolic_ProcessMouseEmbryorep_6 5.9e-16
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseEmbryorep_14 1.4e-31
OatGOBP_Alpha_Amino_Acid_Metabolic_ProcessMouseEmbryorep_14 1.5e-20
OatGOBP_Arginine_Catabolic_ProcessMouseEmbryorep_14 2.2e-37
OatGOBP_Arginine_Metabolic_ProcessMouseEmbryorep_14 7.7e-37
OatGOBP_Cellular_Amino_Acid_Catabolic_ProcessMouseEmbryorep_14 2.5e-32
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseEmbryorep_14 2.7e-13
OatGOBP_Glutamine_Family_Amino_Acid_Metabolic_ProcessMouseEmbryorep_14 2.1e-52
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseEmbryorep_14 7.1e-24
OatGOBP_Organic_Acid_Catabolic_ProcessMouseEmbryorep_14 2.3e-13
OatGOBP_Organonitrogen_Compound_Biosynthetic_ProcessMouseEmbryorep_14 2.4e-12
OatGOBP_Proline_Metabolic_ProcessMouseEmbryorep_14 1.5e-48
OatGOBP_Sensory_PerceptionMouseEmbryorep_14 5.0e-07
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseEmbryorep_14 6.9e-13
OatGOBP_Small_Molecule_Catabolic_ProcessMouseEmbryorep_14 7.6e-14
OatGOBP_Nervous_System_ProcessMouseEmbryorep_1 1.4e-08
OatGOBP_Organonitrogen_Compound_Catabolic_ProcessMouseEmbryorep_1 5.7e-21
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseEmbryorep_18.4e-169
OatGOBP_Small_Molecule_Metabolic_ProcessMouseEmbryorep_1 1.4e-55
OatGOBP_Alpha_Amino_Acid_Metabolic_ProcessMouseEmbryorep_3 9.9e-51
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseEmbryorep_3 9.9e-51
OatGOBP_Organic_Acid_Metabolic_ProcessMouseEmbryorep_3 1.4e-07
OatGOBP_Sensory_PerceptionMouseEmbryorep_3 0.0e+00
OatGOBP_Small_Molecule_Catabolic_ProcessMouseEmbryorep_32.9e-170
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseEmbryorep_4 1.5e-14
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseKidneyrep_2 6.9e-48
OatGOBP_Alpha_Amino_Acid_Metabolic_ProcessMouseKidneyrep_2 7.2e-36
OatGOBP_Arginine_Catabolic_ProcessMouseKidneyrep_2 9.8e-53
OatGOBP_Arginine_Metabolic_ProcessMouseKidneyrep_28.7e-129
OatGOBP_Cellular_Amino_Acid_Biosynthetic_ProcessMouseKidneyrep_2 7.5e-80
OatGOBP_Cellular_Amino_Acid_Catabolic_ProcessMouseKidneyrep_2 2.4e-48
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseKidneyrep_2 3.8e-34
OatGOBP_Dicarboxylic_Acid_Metabolic_ProcessMouseKidneyrep_2 8.2e-31
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseKidneyrep_2 5.9e-97
OatGOBP_Glutamine_Family_Amino_Acid_Catabolic_ProcessMouseKidneyrep_21.4e-171
OatGOBP_Nervous_System_ProcessMouseKidneyrep_2 1.9e-90
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseKidneyrep_2 7.1e-54
OatGOBP_Organic_Acid_Catabolic_ProcessMouseKidneyrep_2 1.3e-83
OatGOBP_Organic_Acid_Metabolic_ProcessMouseKidneyrep_2 3.8e-62
OatGOBP_Organonitrogen_Compound_Biosynthetic_ProcessMouseKidneyrep_2 8.9e-78
OatGOBP_Organonitrogen_Compound_Catabolic_ProcessMouseKidneyrep_2 1.2e-14
OatGOBP_Proline_Metabolic_ProcessMouseKidneyrep_21.4e-221
OatGOBP_Sensory_PerceptionMouseKidneyrep_2 1.4e-94
OatGOBP_Sensory_Perception_Of_Light_StimulusMouseKidneyrep_21.2e-132
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseKidneyrep_2 1.8e-73
OatGOBP_Small_Molecule_Catabolic_ProcessMouseKidneyrep_2 4.4e-89
OatGOBP_Small_Molecule_Metabolic_ProcessMouseKidneyrep_2 1.8e-43
OatGOBP_Arginine_Catabolic_ProcessMouseLiverCN16-D1 3.4e-23
OatGOBP_Arginine_Metabolic_ProcessMouseLiverCN16-D1 2.3e-16
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseLiverCN16-D1 2.6e-11
OatGOBP_Proline_Metabolic_ProcessMouseLiverCN16-D1 4.0e-12
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseLiverCN16-D2 1.6e-08
OatGOBP_Glutamate_Metabolic_ProcessMouseLiverCN16-D2 6.6e-07
OatGOBP_Dicarboxylic_Acid_Metabolic_ProcessMouseLiverCN16-E1 7.0e-07
OatGOBP_Nervous_System_ProcessMouseLiverCN73-C1 1.7e-08
OatGOBP_Arginine_Catabolic_ProcessMouseIntestinerep_3 8.8e-54
OatGOBP_Arginine_Metabolic_ProcessMouseIntestinerep_3 1.1e-43
OatGOBP_Proline_Metabolic_ProcessMouseIntestinerep_3 1.3e-13
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseLymphMS-1 7.5e-11
OatGOBP_Alpha_Amino_Acid_Metabolic_ProcessMouseLymphMS-1 2.1e-13
OatGOBP_Arginine_Metabolic_ProcessMouseLymphMS-1 1.1e-08
OatGOBP_Cellular_Amino_Acid_Catabolic_ProcessMouseLymphMS-1 8.8e-11
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseLymphMS-1 1.3e-13
OatGOBP_Glutamate_Metabolic_ProcessMouseLymphMS-1 7.5e-14
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseLymphMS-1 2.5e-11
OatGOBP_Glutamine_Family_Amino_Acid_Catabolic_ProcessMouseLymphMS-1 2.1e-09
OatGOBP_Glutamine_Family_Amino_Acid_Metabolic_ProcessMouseLymphMS-1 1.7e-07
OatGOBP_Nervous_System_ProcessMouseLymphMS-1 1.4e-08
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseLymphMS-1 6.1e-15
OatGOBP_Organic_Acid_Catabolic_ProcessMouseLymphMS-1 4.1e-10
OatGOBP_Organic_Acid_Metabolic_ProcessMouseLymphMS-1 1.3e-15
OatGOBP_Organonitrogen_Compound_Biosynthetic_ProcessMouseLymphMS-1 1.4e-09
OatGOBP_Organonitrogen_Compound_Catabolic_ProcessMouseLymphMS-1 1.2e-13
OatGOBP_Proline_Metabolic_ProcessMouseLymphMS-1 9.6e-08
OatGOBP_Sensory_PerceptionMouseLymphMS-1 5.2e-11
OatGOBP_Sensory_Perception_Of_Light_StimulusMouseLymphMS-1 3.2e-08
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseLymphMS-1 3.0e-17
OatGOBP_Small_Molecule_Catabolic_ProcessMouseLymphMS-1 5.1e-07
OatGOBP_Small_Molecule_Metabolic_ProcessMouseLymphMS-1 2.6e-11
OatGOBP_Proline_Metabolic_ProcessMouseLungrep_1 2.3e-19
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseBrainrep_4 1.9e-21
OatGOBP_Arginine_Catabolic_ProcessMouseBrainHP_ad_rep3 1.1e-30
OatGOBP_Arginine_Metabolic_ProcessMouseBrainHP_ad_rep3 9.7e-27
OatGOBP_Proline_Metabolic_ProcessMouseBrainHP_ad_rep3 3.3e-10
OatGOBP_Alpha_Amino_Acid_Catabolic_ProcessMouseBrainHP_ad_rep7 1.3e-13
OatGOBP_Alpha_Amino_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 2.5e-12
OatGOBP_Cellular_Amino_Acid_Biosynthetic_ProcessMouseBrainHP_ad_rep7 2.4e-17
OatGOBP_Cellular_Amino_Acid_Catabolic_ProcessMouseBrainHP_ad_rep7 1.9e-12
OatGOBP_Cellular_Amino_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 1.0e-14
OatGOBP_Dicarboxylic_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 6.2e-09
OatGOBP_Glutamate_Metabolic_ProcessMouseBrainHP_ad_rep7 4.1e-14
OatGOBP_Glutamine_Family_Amino_Acid_Biosynthetic_ProcessMouseBrainHP_ad_rep7 3.6e-08
OatGOBP_Glutamine_Family_Amino_Acid_Catabolic_ProcessMouseBrainHP_ad_rep7 1.2e-09
OatGOBP_Glutamine_Family_Amino_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 6.4e-10
OatGOBP_Nervous_System_ProcessMouseBrainHP_ad_rep7 7.0e-10
OatGOBP_Organic_Acid_Catabolic_ProcessMouseBrainHP_ad_rep7 2.2e-13
OatGOBP_Organic_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 4.1e-08
OatGOBP_Organonitrogen_Compound_Biosynthetic_ProcessMouseBrainHP_ad_rep7 2.8e-08
OatGOBP_Organonitrogen_Compound_Catabolic_ProcessMouseBrainHP_ad_rep7 3.3e-07
OatGOBP_Small_Molecule_Catabolic_ProcessMouseBrainHP_ad_rep7 2.3e-11
OatGOBP_Organic_Acid_Biosynthetic_ProcessMouseBrainHP_polb_rep9 3.8e-07
OatGOBP_Sensory_PerceptionMouseBrainHP_polb_rep9 1.2e-09
OatGOBP_Sensory_Perception_Of_Light_StimulusMouseBrainHP_polb_rep9 5.5e-10
OatGOBP_Small_Molecule_Biosynthetic_ProcessMouseBrainHP_polb_rep9 2.8e-11
OatGOBP_Small_Molecule_Metabolic_ProcessMouseBrainHP_polb_rep9 2.0e-09

Top

Oat function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

Top

Oat function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

Top

Transcription factor for Oat envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

Top

Related Drugs for Oat

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

Related Diseases for Oat

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource
OatC0018425Gyrate Atrophy18CLINGEN;CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
OatC0023893Liver Cirrhosis, Experimental1CTD_human
OatC0023903Liver neoplasms1CTD_human
OatC0345904Malignant neoplasm of liver1CTD_human
OatC0520459Necrotizing Enterocolitis1CTD_human
OatC0599035Hyperornithinemia1CTD_human;ORPHANET