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Spatial pattern gene: Tm4sf1 (spascer ID:17112) |
Gene summary for Tm4sf1 |
 Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Tm4sf1 | Gene ID | 17112 |
| Gene name | transmembrane 4 superfamily member 1 |
| Synonyms | L6|M3s1 |
| Cytomap | 3|3 D |
| Type of gene | protein-coding |
| Description | transmembrane 4 L6 family member 112A8 target antigenL6 antigenmembrane component chromosome 3 surface marker 1 homologmembrane component, surface marker 1tumor-associated antigen L6 |
| Modification date | 20220424 |
| UniProtAcc | Q64302 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Tm4sf1 | GO:0016021 | integral component of membrane | 21873635 | Component |
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Spatial pattern events for Tm4sf1 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Tm4sf1 | Mouse | Brain | S1 | 34413515 | 2.07e-15 |
| Tm4sf1 | Mouse | Brain | S2 | 34413515 | 5.44e-15 |
| Tm4sf1 | Mouse | Brain | S3 | 34413515 | 1.64e-15 |
| Tm4sf1 | Mouse | Brain | S4 | 34413515 | 1.37e-15 |
| Tm4sf1 | Mouse | Brain | S6 | 34413515 | 1.46e-15 |
| Tm4sf1 | Mouse | Brain | S7 | 34413515 | 2.15e-14 |
| Tm4sf1 | Mouse | Brain | rep_1 | 35141374 | 2.02e-15 |
| Tm4sf1 | Mouse | Brain | rep_2 | 35141374 | 1.69e-15 |
| Tm4sf1 | Mouse | Brain | rep_3 | 35141374 | 1.64e-15 |
| Tm4sf1 | Mouse | Brain | rep_4 | 35141374 | 1.57e-15 |
| Tm4sf1 | Mouse | Brain | rep_5 | 35141374 | 1.47e-15 |
| Tm4sf1 | Mouse | Brain | rep_6 | 35141374 | 1.73e-15 |
| Tm4sf1 | Mouse | Kidney | CLP | 34003797 | 2.19e-15 |
| Tm4sf1 | Mouse | Kidney | IRI | 34003797 | 2.29e-15 |
| Tm4sf1 | Mouse | Kidney | Sham | 34003797 | 2.58e-15 |
| Tm4sf1 | Mouse | Kidney | rep_1 | 34853151 | 4.13e-15 |
| Tm4sf1 | Mouse | Kidney | rep_2 | 34853151 | 1.01e-14 |
| Tm4sf1 | Mouse | Kidney | rep_3 | 34853151 | 4.93e-15 |
| Tm4sf1 | Mouse | Kidney | rep_4 | 34853151 | 4.07e-15 |
| Tm4sf1 | Mouse | Kidney | rep_5 | 34853151 | 5.74e-10 |
| Tm4sf1 | Mouse | Brain | rep_1 | 33469025 | 1.30e-15 |
| Tm4sf1 | Mouse | Liver | rep_20 | 35021063 | 1.46e-13 |
| Tm4sf1 | Mouse | Liver | rep_21 | 35021063 | 2.56e-14 |
| Tm4sf1 | Mouse | Liver | rep_22 | 35021063 | 3.35e-10 |
| Tm4sf1 | Mouse | Brain | rep_1 | 35027729 | 7.96e-08 |
| Tm4sf1 | Mouse | Brain | rep_2 | 35027729 | 2.83e-15 |
| Tm4sf1 | Mouse | Brain | rep_3 | 35027729 | 1.32e-15 |
| Tm4sf1 | Mouse | Brain | rep_4 | 35027729 | 5.87e-15 |
| Tm4sf1 | Mouse | Brain | rep_5 | 35027729 | 2.62e-15 |
| Tm4sf1 | Mouse | Intestine | rep_2 | 35149721 | 4.77e-08 |
| Tm4sf1 | Mouse | Intestine | rep_3 | 35149721 | 1.27e-06 |
| Tm4sf1 | Mouse | Lymph | A1 | 0 | 3.29e-15 |
| Tm4sf1 | Mouse | Lymph | B1 | 0 | 3.66e-15 |
| Tm4sf1 | Mouse | Lung | rep_1 | 35290801 | 4.52e-15 |
| Tm4sf1 | Mouse | Lung | rep_2 | 35290801 | 8.75e-15 |
| Tm4sf1 | Mouse | Lung | rep_3 | 35290801 | 5.26e-15 |
| Tm4sf1 | Mouse | Lung | rep_4 | 35290801 | 3.04e-15 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Brain_rep_1_H&E  |  |
Brain_rep_2_H&E  |  |
Brain_rep_3_H&E  |  |
Brain_rep_4_H&E  |  |
Brain_rep_5_H&E  |  |
Brain_rep_6_H&E  |  |
Kidney_CLP_H&E  |  |
Kidney_IRI_H&E  |  |
Kidney_Sham_H&E  |  |
Kidney_rep_1_H&E  |  |
Kidney_rep_2_H&E  |  |
Kidney_rep_3_H&E  |  |
Kidney_rep_4_H&E  |  |
Kidney_rep_5_H&E  |  |
Brain_rep_1_H&E  | |
Liver_rep_20_H&E  | |
Liver_rep_21_H&E  | |
Liver_rep_22_H&E  | |
Brain_rep_1_H&E  |  |
Brain_rep_2_H&E  |  |
Brain_rep_3_H&E  |  |
Brain_rep_4_H&E  |  |
Brain_rep_5_H&E  |  |
Lung_rep_1_H&E  |  |
Lung_rep_2_H&E  |  |
Lung_rep_3_H&E  |  |
Lung_rep_4_H&E  |  |
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Spatial pattern pathway has Tm4sf1 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
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Tm4sf1 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Tm4sf1 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for Tm4sf1 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for Tm4sf1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Tm4sf1 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
