Home

Download & Upload

Statistics

Landscape

Help

Contact

	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Hoxd9 (spascer ID:15438)

Gene summary for Hoxd9

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Hoxd9
	Gene ID	15438
	Gene name	homeobox D9
	Synonyms	Hox-4.4\|Hox-5.2
	Cytomap	2 C3\|2 44.13 cM
	Type of gene	protein-coding
	Description	homeobox protein Hox-D9homeo box D9homeobox protein Hox-4.4homeobox protein Hox-5.2
	Modification date	20220424
	UniProtAcc	P28357

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Hoxd9	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	21873635	Function
Hoxd9	GO:0003700	DNA-binding transcription factor activity	21873635	Function
Hoxd9	GO:0005634	nucleus	21873635	Component
Hoxd9	GO:0006357	regulation of transcription by RNA polymerase II	21873635	Process
Hoxd9	GO:0009952	anterior/posterior pattern specification	21873635	Process
Hoxd9	GO:0009954	proximal/distal pattern formation	21873635	Process
Hoxd9	GO:0048704	embryonic skeletal system morphogenesis	21873635	Process

Top

Spatial pattern events for Hoxd9

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Hoxd9	Mouse	Embryo	rep_1	34489600	3.74e-16
Hoxd9	Mouse	Embryo	rep_2	34489600	4.14e-16
Hoxd9	Mouse	Embryo	rep_3	34489600	4.04e-16
Hoxd9	Mouse	Embryo	rep_4	34489600	3.67e-16
Hoxd9	Mouse	Embryo	rep_5	34489600	4.08e-16
Hoxd9	Mouse	Embryo	rep_6	34489600	3.64e-16
Hoxd9	Mouse	Kidney	CLP	34003797	2.19e-15
Hoxd9	Mouse	Kidney	IRI	34003797	2.29e-15
Hoxd9	Mouse	Kidney	Sham	34003797	2.58e-15
Hoxd9	Mouse	Kidney	rep_1	34853151	6.86e-09
Hoxd9	Mouse	Kidney	rep_3	34853151	4.93e-15
Hoxd9	Mouse	Kidney	rep_4	34853151	2.12e-06
Hoxd9	Mouse	Kidney	rep_5	34853151	3.18e-15

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Kidney_CLP_H&E
Kidney_IRI_H&E
Kidney_Sham_H&E
Kidney_rep_1_H&E
Kidney_rep_3_H&E
Kidney_rep_4_H&E
Kidney_rep_5_H&E

Top

Spatial pattern pathway has Hoxd9 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Hoxd9	GOBP_Animal_Organ_Morphogenesis	Mouse	Spinal cord	CN94_E1	6.6e-06
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Spinal cord	CN94_E1	7.7e-07
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Spinal cord	CN94_E1	6.6e-06
Hoxd9	GOBP_Muscle_Structure_Development	Mouse	Spinal cord	CN94_E1	7.5e-07
Hoxd9	GOBP_Muscle_Tissue_Development	Mouse	Spinal cord	CN94_E1	3.5e-08
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Spinal cord	CN94_E1	1.6e-06
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Spinal cord	CN94_E1	6.2e-07
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Spinal cord	CN94_E1	2.2e-06
Hoxd9	GOBP_Peripheral_Nervous_System_Development	Mouse	Spinal cord	CN94_E1	2.5e-06
Hoxd9	GOBP_Regionalization	Mouse	Spinal cord	CN94_E1	7.3e-06
Hoxd9	GOBP_Reproduction	Mouse	Spinal cord	CN94_E1	7.8e-08
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Spinal cord	CN94_E1	5.6e-06
Hoxd9	GOBP_Behavior	Mouse	Spinal cord	L7bCN02_E1	3.7e-06
Hoxd9	GOBP_Adult_Behavior	Mouse	Spinal cord	L7CN45_C1	3.6e-09
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Spinal cord	L7CN45_C1	1.7e-09
Hoxd9	GOBP_Appendage_Development	Mouse	Spinal cord	L7CN45_C1	2.2e-06
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Spinal cord	L7CN45_C1	9.0e-08
Hoxd9	GOBP_Embryo_Development	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Hoxd9	GOBP_Embryo_Development_Ending_In_Birth_Or_Egg_Hatching	Mouse	Spinal cord	L7CN45_C1	3.9e-07
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Spinal cord	L7CN45_C1	6.5e-06
Hoxd9	GOBP_Embryonic_Morphogenesis	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Hoxd9	GOBP_Embryonic_Organ_Development	Mouse	Spinal cord	L7CN45_C1	5.1e-08
Hoxd9	GOBP_Fertilization	Mouse	Spinal cord	L7CN45_C1	3.0e-07
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Hoxd9	GOBP_Muscle_Organ_Development	Mouse	Spinal cord	L7CN45_C1	1.7e-07
Hoxd9	GOBP_Neurogenesis	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Hoxd9	GOBP_Neuron_Development	Mouse	Spinal cord	L7CN45_C1	5.6e-08
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Spinal cord	L7CN45_C1	3.4e-09
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Spinal cord	L7CN45_C1	2.2e-09
Hoxd9	GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Spinal cord	L7CN45_C1	1.4e-06
Hoxd9	GOBP_Single_Fertilization	Mouse	Spinal cord	L7CN45_C1	1.0e-07
Hoxd9	GOBP_Skeletal_Muscle_Organ_Development	Mouse	Spinal cord	L7CN45_C1	1.7e-08
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Spinal cord	L7CN45_C1	2.2e-08
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Spinal cord	L7CN47_C1	3.7e-07
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Spinal cord	L7CN47_C1	4.0e-06
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Spinal cord	L7CN47_D1	4.7e-06
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Spinal cord	L7CN97_E2	1.4e-08
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Spinal cord	L8CN17_E1	2.7e-06
Hoxd9	GOBP_Animal_Organ_Morphogenesis	Mouse	Brain	rep_27	2.0e-06
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Brain	rep_27	3.1e-05
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Brain	rep_27	7.2e-05
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Brain	rep_27	2.8e-05
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Brain	rep_27	3.2e-09
Hoxd9	GOBP_Regionalization	Mouse	Brain	rep_27	3.9e-08
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Brain	rep_41	1.2e-08
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Brain	rep_71	2.6e-07
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Brain	rep_74	7.7e-10
Hoxd9	GOBP_Adult_Behavior	Mouse	Brain	rep_1	1.4e-26
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Brain	rep_1	2.8e-17
Hoxd9	GOBP_Behavior	Mouse	Brain	rep_1	6.8e-65
Hoxd9	GOBP_Embryo_Development_Ending_In_Birth_Or_Egg_Hatching	Mouse	Brain	rep_1	1.0e-08
Hoxd9	GOBP_Gland_Development	Mouse	Brain	rep_1	4.1e-23
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Brain	rep_1	1.1e-43
Hoxd9	GOBP_Muscle_Organ_Development	Mouse	Brain	rep_1	2.9e-08
Hoxd9	GOBP_Muscle_Tissue_Development	Mouse	Brain	rep_1	4.8e-13
Hoxd9	GOBP_Neurogenesis	Mouse	Brain	rep_1	6.4e-19
Hoxd9	GOBP_Neuron_Development	Mouse	Brain	rep_1	3.8e-29
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Brain	rep_1	8.7e-25
Hoxd9	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Brain	rep_1	2.5e-12
Hoxd9	GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Brain	rep_1	1.6e-17
Hoxd9	GOBP_Skeletal_Muscle_Organ_Development	Mouse	Brain	rep_1	4.3e-31
Hoxd9	GOBP_Animal_Organ_Morphogenesis	Mouse	Brain	rep_3	5.4e-57
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Brain	rep_3	1.2e-140
Hoxd9	GOBP_Appendage_Development	Mouse	Brain	rep_3	9.3e-152
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Brain	rep_3	1.8e-121
Hoxd9	GOBP_Embryo_Development	Mouse	Brain	rep_3	1.3e-126
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Brain	rep_3	1.2e-95
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Brain	rep_3	6.6e-59
Hoxd9	GOBP_Embryonic_Morphogenesis	Mouse	Brain	rep_3	5.0e-165
Hoxd9	GOBP_Embryonic_Organ_Development	Mouse	Brain	rep_3	4.3e-190
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Brain	rep_3	1.5e-168
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Brain	rep_3	1.0e-111
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Brain	rep_3	1.2e-119
Hoxd9	GOBP_Fertilization	Mouse	Brain	rep_3	7.5e-151
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Brain	rep_3	2.6e-39
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Brain	rep_3	5.9e-48
Hoxd9	GOBP_Muscle_Structure_Development	Mouse	Brain	rep_3	3.3e-77
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Brain	rep_3	1.4e-196
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Brain	rep_3	9.4e-206
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Brain	rep_3	7.5e-168
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Brain	rep_3	1.6e-118
Hoxd9	GOBP_Peripheral_Nervous_System_Development	Mouse	Brain	rep_3	3.4e-87
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Brain	rep_3	8.1e-185
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Brain	rep_3	1.1e-13
Hoxd9	GOBP_Regionalization	Mouse	Brain	rep_3	1.3e-180
Hoxd9	GOBP_Reproduction	Mouse	Brain	rep_3	3.4e-125
Hoxd9	GOBP_Single_Fertilization	Mouse	Brain	rep_3	3.9e-152
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Brain	rep_3	3.3e-190
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Brain	rep_3	7.3e-51
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Brain	rep_5	8.1e-44
Hoxd9	GOBP_Appendage_Development	Mouse	Embryo	rep_4	2.9e-07
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Embryo	rep_4	3.5e-12
Hoxd9	GOBP_Muscle_Organ_Development	Mouse	Embryo	rep_4	6.8e-16
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Embryo	rep_6	1.5e-09
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Embryo	rep_6	2.3e-24
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Embryo	rep_6	3.8e-12
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Embryo	rep_14	2.4e-19
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Embryo	rep_14	2.2e-13
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Embryo	rep_14	5.5e-53
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Embryo	rep_14	2.3e-45
Hoxd9	GOBP_Fertilization	Mouse	Embryo	rep_14	8.1e-31
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Embryo	rep_14	1.4e-36
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Embryo	rep_14	1.4e-14
Hoxd9	GOBP_Peripheral_Nervous_System_Development	Mouse	Embryo	rep_14	9.4e-37
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Embryo	rep_14	1.6e-173
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Embryo	rep_14	9.0e-18
Hoxd9	GOBP_Single_Fertilization	Mouse	Embryo	rep_14	4.1e-52
Hoxd9	GOBP_Animal_Organ_Morphogenesis	Mouse	Embryo	rep_1	1.7e-10
Hoxd9	GOBP_Behavior	Mouse	Embryo	rep_1	1.7e-148
Hoxd9	GOBP_Neurogenesis	Mouse	Embryo	rep_1	8.2e-08
Hoxd9	GOBP_Adult_Behavior	Mouse	Embryo	rep_2	1.1e-09
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Embryo	rep_2	1.1e-09
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Embryo	rep_2	8.6e-166
Hoxd9	GOBP_Appendage_Development	Mouse	Embryo	rep_2	7.3e-30
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Embryo	rep_2	7.3e-30
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Embryo	rep_2	2.3e-43
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Embryo	rep_2	5.8e-51
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Embryo	rep_2	5.6e-141
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Embryo	rep_2	1.0e-140
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Embryo	rep_2	8.0e-13
Hoxd9	GOBP_Neuron_Development	Mouse	Embryo	rep_2	4.8e-18
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Embryo	rep_2	0.0e+00
Hoxd9	GOBP_Regionalization	Mouse	Embryo	rep_2	5.4e-84
Hoxd9	GOBP_Embryo_Development	Mouse	Embryo	rep_3	1.2e-173
Hoxd9	GOBP_Embryo_Development_Ending_In_Birth_Or_Egg_Hatching	Mouse	Embryo	rep_3	0.0e+00
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Embryo	rep_3	4.4e-129
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Embryo	rep_3	0.0e+00
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Embryo	rep_3	1.5e-267
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Embryo	rep_3	0.0e+00
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Embryo	rep_3	2.1e-193
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Embryo	rep_3	2.8e-168
Hoxd9	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Embryo	rep_3	0.0e+00
Hoxd9	GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Embryo	rep_3	0.0e+00
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Embryo	rep_3	0.0e+00
Hoxd9	GOBP_Skeletal_Muscle_Organ_Development	Mouse	Embryo	rep_4	3.5e-15
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Embryo	rep_6	3.1e-59
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Kidney	IRI	9.2e-65
Hoxd9	GOBP_Neurogenesis	Mouse	Kidney	Nep	4.6e-22
Hoxd9	GOBP_Neuron_Development	Mouse	Kidney	Nep	8.3e-23
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Kidney	Nep	8.3e-23
Hoxd9	GOBP_Adult_Behavior	Mouse	Kidney	rep_2	1.9e-85
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Kidney	rep_2	2.8e-75
Hoxd9	GOBP_Animal_Organ_Morphogenesis	Mouse	Kidney	rep_2	4.2e-71
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Kidney	rep_2	3.0e-23
Hoxd9	GOBP_Appendage_Development	Mouse	Kidney	rep_2	7.9e-84
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Kidney	rep_2	6.0e-39
Hoxd9	GOBP_Behavior	Mouse	Kidney	rep_2	1.0e-54
Hoxd9	GOBP_Embryo_Development	Mouse	Kidney	rep_2	7.4e-46
Hoxd9	GOBP_Embryo_Development_Ending_In_Birth_Or_Egg_Hatching	Mouse	Kidney	rep_2	9.8e-28
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Kidney	rep_2	1.0e-52
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Kidney	rep_2	1.5e-11
Hoxd9	GOBP_Embryonic_Morphogenesis	Mouse	Kidney	rep_2	7.3e-66
Hoxd9	GOBP_Embryonic_Organ_Development	Mouse	Kidney	rep_2	1.3e-60
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Kidney	rep_2	3.0e-55
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Kidney	rep_2	2.0e-38
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Kidney	rep_2	1.6e-37
Hoxd9	GOBP_Fertilization	Mouse	Kidney	rep_2	2.2e-43
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Kidney	rep_2	6.3e-09
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Kidney	rep_2	4.0e-39
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Kidney	rep_2	3.1e-45
Hoxd9	GOBP_Muscle_Organ_Development	Mouse	Kidney	rep_2	4.0e-20
Hoxd9	GOBP_Muscle_Structure_Development	Mouse	Kidney	rep_2	2.7e-36
Hoxd9	GOBP_Muscle_Tissue_Development	Mouse	Kidney	rep_2	4.0e-62
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Kidney	rep_2	7.3e-42
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Kidney	rep_2	7.7e-30
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Kidney	rep_2	2.2e-14
Hoxd9	GOBP_Neurogenesis	Mouse	Kidney	rep_2	2.4e-78
Hoxd9	GOBP_Neuron_Development	Mouse	Kidney	rep_2	1.3e-42
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Kidney	rep_2	3.9e-32
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Kidney	rep_2	2.3e-36
Hoxd9	GOBP_Peripheral_Nervous_System_Development	Mouse	Kidney	rep_2	1.1e-169
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Kidney	rep_2	5.0e-67
Hoxd9	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Kidney	rep_2	4.5e-10
Hoxd9	GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Kidney	rep_2	8.3e-40
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Kidney	rep_2	5.2e-14
Hoxd9	GOBP_Regionalization	Mouse	Kidney	rep_2	2.1e-25
Hoxd9	GOBP_Reproduction	Mouse	Kidney	rep_2	9.0e-46
Hoxd9	GOBP_Single_Fertilization	Mouse	Kidney	rep_2	2.3e-57
Hoxd9	GOBP_Skeletal_Muscle_Organ_Development	Mouse	Kidney	rep_2	2.2e-97
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Kidney	rep_2	7.5e-46
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Kidney	rep_2	1.2e-20
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Liver	CN16-D2	5.1e-07
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Liver	CN16-D2	9.0e-09
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Liver	CN16-D2	3.1e-08
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Liver	CN16-D2	5.1e-07
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Liver	CN16-D2	2.4e-09
Hoxd9	GOBP_Appendage_Development	Mouse	Liver	CN16-E1	2.0e-11
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Liver	CN16-E1	5.5e-11
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Liver	CN16-E1	2.2e-13
Hoxd9	GOBP_Single_Fertilization	Mouse	Liver	CN16-E1	1.2e-09
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Liver	CN65-C1	5.6e-08
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Liver	CN65-D1	3.7e-08
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Liver	CN73-C1	9.4e-07
Hoxd9	GOBP_Appendage_Development	Mouse	Liver	rep_15	1.7e-18
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Liver	rep_15	1.5e-10
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Liver	rep_15	1.5e-24
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Liver	rep_15	2.2e-34
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Liver	rep_16	5.6e-14
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Liver	rep_16	2.3e-12
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Liver	rep_16	1.1e-13
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Liver	rep_16	1.2e-12
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Liver	rep_16	3.6e-20
Hoxd9	GOBP_Regionalization	Mouse	Liver	rep_16	1.2e-11
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Lymph	MS-1	2.3e-08
Hoxd9	GOBP_Animal_Organ_Morphogenesis	Mouse	Lymph	MS-1	4.4e-09
Hoxd9	GOBP_Appendage_Development	Mouse	Lymph	MS-1	2.7e-13
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Lymph	MS-1	2.7e-10
Hoxd9	GOBP_Embryo_Development	Mouse	Lymph	MS-1	2.5e-08
Hoxd9	GOBP_Embryo_Development_Ending_In_Birth_Or_Egg_Hatching	Mouse	Lymph	MS-1	4.0e-11
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Lymph	MS-1	4.4e-08
Hoxd9	GOBP_Embryonic_Forelimb_Morphogenesis	Mouse	Lymph	MS-1	5.2e-12
Hoxd9	GOBP_Embryonic_Morphogenesis	Mouse	Lymph	MS-1	5.6e-07
Hoxd9	GOBP_Embryonic_Organ_Development	Mouse	Lymph	MS-1	1.1e-11
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Lymph	MS-1	1.4e-11
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Lymph	MS-1	5.9e-22
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Lymph	MS-1	7.9e-14
Hoxd9	GOBP_Fertilization	Mouse	Lymph	MS-1	1.2e-08
Hoxd9	GOBP_Gland_Development	Mouse	Lymph	MS-1	1.7e-10
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Lymph	MS-1	2.7e-08
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Lymph	MS-1	1.3e-12
Hoxd9	GOBP_Muscle_Organ_Development	Mouse	Lymph	MS-1	4.7e-14
Hoxd9	GOBP_Muscle_Structure_Development	Mouse	Lymph	MS-1	3.8e-09
Hoxd9	GOBP_Muscle_Tissue_Development	Mouse	Lymph	MS-1	2.4e-10
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Lymph	MS-1	6.1e-11
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Lymph	MS-1	1.8e-10
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Lymph	MS-1	2.2e-09
Hoxd9	GOBP_Neurogenesis	Mouse	Lymph	MS-1	4.1e-08
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Lymph	MS-1	3.9e-12
Hoxd9	GOBP_Peripheral_Nervous_System_Development	Mouse	Lymph	MS-1	5.1e-10
Hoxd9	GOBP_Peripheral_Nervous_System_Neuron_Differentiation	Mouse	Lymph	MS-1	4.0e-07
Hoxd9	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Lymph	MS-1	4.4e-12
Hoxd9	GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Lymph	MS-1	1.7e-12
Hoxd9	GOBP_Proximal_Distal_Pattern_Formation	Mouse	Lymph	MS-1	3.3e-09
Hoxd9	GOBP_Regionalization	Mouse	Lymph	MS-1	2.7e-12
Hoxd9	GOBP_Reproduction	Mouse	Lymph	MS-1	1.1e-09
Hoxd9	GOBP_Single_Fertilization	Mouse	Lymph	MS-1	2.3e-09
Hoxd9	GOBP_Skeletal_Muscle_Organ_Development	Mouse	Lymph	MS-1	1.2e-17
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Lymph	MS-1	2.6e-12
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Lymph	MS-1	8.7e-13
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Lung	rep_1	1.5e-07
Hoxd9	GOBP_Embryonic_Appendage_Morphogenesis	Mouse	Lung	rep_1	9.0e-11
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Lung	rep_1	7.5e-20
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Lung	rep_1	5.8e-10
Hoxd9	GOBP_Reproduction	Mouse	Lung	rep_1	9.6e-12
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Lung	rep_1	4.0e-16
Hoxd9	GOBP_Behavior	Mouse	Brain	rep_4	8.1e-10
Hoxd9	GOBP_Forelimb_Morphogenesis	Mouse	Brain	rep_4	9.1e-22
Hoxd9	GOBP_Regionalization	Mouse	Brain	rep_4	6.3e-07
Hoxd9	GOBP_Embryonic_Organ_Development	Mouse	Brain	rep_7	7.0e-07
Hoxd9	GOBP_Embryonic_Organ_Morphogenesis	Mouse	Brain	rep_7	2.6e-14
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Brain	rep_7	1.0e-12
Hoxd9	GOBP_Adult_Locomotory_Behavior	Mouse	Brain	HP_ad_rep7	5.3e-09
Hoxd9	GOBP_Appendage_Development	Mouse	Brain	HP_ad_rep7	5.7e-10
Hoxd9	GOBP_Appendage_Morphogenesis	Mouse	Brain	HP_ad_rep7	4.6e-07
Hoxd9	GOBP_Behavior	Mouse	Brain	HP_ad_rep7	1.4e-12
Hoxd9	GOBP_Embryo_Development_Ending_In_Birth_Or_Egg_Hatching	Mouse	Brain	HP_ad_rep7	7.5e-07
Hoxd9	GOBP_Fertilization	Mouse	Brain	HP_ad_rep7	4.9e-08
Hoxd9	GOBP_Gland_Development	Mouse	Brain	HP_ad_rep7	3.2e-13
Hoxd9	GOBP_Locomotory_Behavior	Mouse	Brain	HP_ad_rep7	1.8e-08
Hoxd9	GOBP_Mammary_Gland_Development	Mouse	Brain	HP_ad_rep7	7.5e-10
Hoxd9	GOBP_Muscle_Organ_Development	Mouse	Brain	HP_ad_rep7	8.3e-07
Hoxd9	GOBP_Muscle_Tissue_Development	Mouse	Brain	HP_ad_rep7	4.5e-09
Hoxd9	GOBP_Negative_Regulation_Of_Biosynthetic_Process	Mouse	Brain	HP_ad_rep7	3.3e-12
Hoxd9	GOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Brain	HP_ad_rep7	5.9e-11
Hoxd9	GOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Brain	HP_ad_rep7	7.1e-13
Hoxd9	GOBP_Neurogenesis	Mouse	Brain	HP_ad_rep7	3.9e-07
Hoxd9	GOBP_Neuron_Development	Mouse	Brain	HP_ad_rep7	3.9e-07
Hoxd9	GOBP_Neuron_Differentiation	Mouse	Brain	HP_ad_rep7	3.9e-07
Hoxd9	GOBP_Pattern_Specification_Process	Mouse	Brain	HP_ad_rep7	2.1e-10
Hoxd9	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Brain	HP_ad_rep7	2.8e-11
Hoxd9	GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii	Mouse	Brain	HP_ad_rep7	7.3e-11
Hoxd9	GOBP_Regionalization	Mouse	Brain	HP_ad_rep7	2.8e-09
Hoxd9	GOBP_Reproduction	Mouse	Brain	HP_ad_rep7	7.9e-09
Hoxd9	GOBP_Single_Fertilization	Mouse	Brain	HP_ad_rep7	7.1e-10
Hoxd9	GOBP_Skeletal_Muscle_Organ_Development	Mouse	Brain	HP_ad_rep7	2.7e-09
Hoxd9	GOBP_Skeletal_System_Development	Mouse	Brain	HP_ad_rep7	3.7e-09
Hoxd9	GOBP_Anterior_Posterior_Pattern_Specification	Mouse	Brain	HP_adpolb_rep1	3.0e-08
Hoxd9	GOBP_Embryonic_Skeletal_System_Development	Mouse	Brain	HP_adpolb_rep1	6.0e-10
Hoxd9	GOBP_Hindlimb_Morphogenesis	Mouse	Brain	HP_adpolb_rep3	4.3e-07
Hoxd9	GOBP_Adult_Behavior	Mouse	Brain	HP_polb_rep9	1.8e-13
Hoxd9	GOBP_Embryo_Development	Mouse	Brain	HP_polb_rep9	1.5e-10
Hoxd9	GOBP_Embryonic_Morphogenesis	Mouse	Brain	HP_polb_rep9	3.7e-09
Hoxd9	GOBP_Embryonic_Organ_Development	Mouse	Brain	HP_polb_rep9	9.6e-11
Hoxd9	GOBP_Embryonic_Skeletal_System_Morphogenesis	Mouse	Brain	HP_polb_rep9	3.5e-15
Hoxd9	GOBP_Skeletal_System_Morphogenesis	Mouse	Brain	HP_polb_rep9	1.1e-07

Top

Hoxd9 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

Top

Hoxd9 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

Top

Transcription factor for Hoxd9 envolved

Transcription factor analysis using single cell data.

TF	Tissue	Group	Cell types	Target genes	Rss score
Hoxd9	Kidney	LPS	PT_S3_OS	Hoxd8,Clcnkb,Spp1, etc.	0.292
Hoxd9	Kidney	LPS	TAL	Hoxd8,Clcnkb,Spp1, etc.	0.346
Hoxd9	Kidney	LPS	CNT	Hoxd8,Clcnkb,Spp1, etc.	0.294
Hoxd9	Kidney	LPS	PT_S2	Hoxd8,Clcnkb,Spp1, etc.	0.268
Hoxd9	Kidney	LPS	PT_S3_C	Hoxd8,Clcnkb,Spp1, etc.	0.311
Hoxd9	Kidney	IRI	PT_S1	Atp1b1,Hoxd8,Scnn1a, etc.	0.317
Hoxd9	Kidney	IRI	CNT	Atp1b1,Hoxd8,Scnn1a, etc.	0.319
Hoxd9	Kidney	IRI	PT_S3_C	Atp1b1,Hoxd8,Scnn1a, etc.	0.302
Hoxd9	Kidney	IRI	DCT	Atp1b1,Hoxd8,Scnn1a, etc.	0.263
Hoxd9	Kidney	IRI	PT_S2	Atp1b1,Hoxd8,Scnn1a, etc.	0.255
Hoxd9	Kidney	IRI	PT_Fibrinogen	Atp1b1,Hoxd8,Scnn1a, etc.	0.262
HOXD9	Uterus	proliferative	SOX9	SPARCL1,CRISP2,HOXA11, etc.	0.293
HOXD9	Uterus	proliferative	Ciliated	SPARCL1,CRISP2,HOXA11, etc.	0.293
Hoxd9	Kidney	Sham	CNT	Hoxd8,Scnn1a,Cav2, etc.	0.339
Hoxd9	Kidney	Sham	PT_S3_OS	Hoxd8,Scnn1a,Cav2, etc.	0.253
Hoxd9	Kidney	Sham	PT_S3_C	Hoxd8,Scnn1a,Cav2, etc.	0.254
Hoxd9	Kidney	Sham	TAL	Hoxd8,Scnn1a,Cav2, etc.	0.338
Hoxd9	Kidney	Sham	DCT	Hoxd8,Scnn1a,Cav2, etc.	0.306