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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

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Transcription factors events

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Related drugs with this gene

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Related diseases with this gene

Spatial pattern gene: Hdgf (spascer ID:15191)

Gene summary for Hdgf

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Hdgf

Gene ID

15191

Gene nameheparin binding growth factor
SynonymsAI118077|D3Ertd299e
Cytomap3 F1|3 38.78 cM
Type of geneprotein-coding
Descriptionhepatoma-derived growth factor
Modification date20220424
UniProtAcc

P51859


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Hdgf

GO:0003690

double-stranded DNA binding

21873635

Function
Hdgf

GO:0003712

transcription coregulator activity

21873635

Function
Hdgf

GO:0005634

nucleus

21873635

Component
Hdgf

GO:0006357

regulation of transcription by RNA polymerase II

21873635

Process

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Spatial pattern events for Hdgf

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
HdgfMouseBrain13B 326376225.45e-06
HdgfMouseBrain22A 326376221.12e-07
HdgfMouseBrain29B 326376229.89e-06
HdgfMouseBrainrep_2 351413745.23e-12
HdgfMouseBrainrep_3 351413748.57e-13
HdgfMouseBrainrep_4 351413742.29e-07
HdgfMouseBrainrep_5 351413741.48e-10
HdgfMouseBrainrep_6 351413745.05e-10
HdgfMouseEmbryo1D 342108872.73e-06
HdgfMouseEmbryo3D 342108871.84e-09
HdgfMouseEmbryo3H 342108873.41e-06
HdgfMouseEmbryo4E 342108875.57e-14
HdgfMouseEmbryorep_2 331887761.25e-11
HdgfMouseEmbryorep_4 331887765.08e-15
HdgfMouseEmbryorep_5 331887761.40e-14
HdgfMouseEmbryorep_12 331887762.10e-06
HdgfMouseEmbryorep_13 331887763.08e-07
HdgfMouseEmbryorep_15 331887767.14e-08
HdgfMouseKidneyCLP 340037972.72e-14
HdgfMouseKidneyIRI 340037974.62e-13
HdgfMouseKidneyrep_3 348531512.99e-09
HdgfMouseKidneyrep_4 348531512.25e-06
HdgfMouseBrainrep_1 334690251.30e-15
HdgfMouseBrainrep_2 350277292.46e-10
HdgfMouseBrainrep_3 350277292.54e-07
HdgfMouseIntestinerep_2 351497211.64e-09
HdgfMouseIntestinerep_3 351497215.21e-15
HdgfMouseIntestinerep_4 351497212.30e-15
HdgfMouseLymphA1 01.35e-06
HdgfMouseLymphB1 03.66e-15
HdgfMouseLungrep_1 352908014.52e-15
HdgfMouseLungrep_2 352908011.42e-14
HdgfMouseLungrep_3 352908015.26e-15
HdgfMouseLungrep_4 352908013.04e-15
HdgfMouseBrainrep_6 352106242.42e-08
HdgfMouseBrainrep_7 352106241.46e-06

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Brain_rep_2_H&E
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Brain_rep_3_H&E
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Brain_rep_4_H&E
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Brain_rep_5_H&E
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Brain_rep_6_H&E
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Kidney_CLP_H&E
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Kidney_IRI_H&E
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Kidney_rep_3_H&E
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Kidney_rep_4_H&E
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Brain_rep_1_H&E
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Brain_rep_2_H&E
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Brain_rep_3_H&E
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Lung_rep_1_H&E
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Lung_rep_2_H&E
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Lung_rep_3_H&E
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Lung_rep_4_H&E
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Spatial pattern pathway has Hdgf envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseSpinal cordCN94_E1 1.6e-06
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseSpinal cordCN94_E1 6.2e-07
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseSpinal cordCN94_E1 2.2e-06
HdgfGOBP_Cellular_Response_To_Topologically_Incorrect_ProteinMouseSpinal cordL7CN45_C1 7.6e-08
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseSpinal cordL7CN45_C1 2.2e-07
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseSpinal cordL7CN45_C1 5.7e-09
HdgfGOBP_Response_To_CytokineMouseSpinal cordL7CN45_C1 8.0e-07
HdgfGOBP_Response_To_Endoplasmic_Reticulum_StressMouseSpinal cordL7CN45_C1 2.7e-07
HdgfGOBP_Response_To_Interleukin_7MouseSpinal cordL7CN45_C1 1.9e-07
HdgfGOBP_Response_To_Topologically_Incorrect_ProteinMouseSpinal cordL7CN45_C1 5.1e-07
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseBrainrep_27 7.2e-05
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseBrainrep_27 2.8e-05
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseBrainrep_37 3.1e-05
HdgfGOBP_Cellular_Response_To_Topologically_Incorrect_ProteinMouseBrainrep_31.4e-162
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseBrainrep_33.4e-151
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseBrainrep_33.9e-131
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseBrainrep_31.4e-196
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseBrainrep_39.4e-206
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseBrainrep_37.5e-168
HdgfGOBP_Response_To_CytokineMouseBrainrep_3 1.2e-08
HdgfGOBP_Response_To_Endoplasmic_Reticulum_StressMouseBrainrep_36.3e-133
HdgfGOBP_Response_To_Interleukin_7MouseBrainrep_32.7e-132
HdgfGOBP_Response_To_Topologically_Incorrect_ProteinMouseBrainrep_38.7e-153
HdgfGOBP_Cellular_Response_To_Topologically_Incorrect_ProteinMouseEmbryorep_14 8.7e-22
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseEmbryorep_14 2.5e-19
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseEmbryorep_14 5.5e-61
HdgfGOBP_Response_To_Interleukin_7MouseEmbryorep_14 6.1e-07
HdgfGOBP_Response_To_Topologically_Incorrect_ProteinMouseEmbryorep_14 7.2e-14
HdgfGOBP_Response_To_CytokineMouseEmbryorep_18.2e-211
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseEmbryorep_2 8.0e-13
HdgfGOBP_Cellular_Response_To_Topologically_Incorrect_ProteinMouseEmbryorep_3 0.0e+00
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseEmbryorep_31.7e-305
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseEmbryorep_31.5e-267
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseEmbryorep_3 0.0e+00
HdgfGOBP_Response_To_Endoplasmic_Reticulum_StressMouseEmbryorep_3 1.8e-13
HdgfGOBP_Response_To_Topologically_Incorrect_ProteinMouseEmbryorep_32.3e-263
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseKidneyrep_2 5.3e-42
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseKidneyrep_2 7.1e-13
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseKidneyrep_2 7.3e-42
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseKidneyrep_2 7.7e-30
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseKidneyrep_2 2.2e-14
HdgfGOBP_Response_To_CytokineMouseKidneyrep_2 3.1e-14
HdgfGOBP_Response_To_Endoplasmic_Reticulum_StressMouseKidneyrep_2 1.2e-89
HdgfGOBP_Response_To_Interleukin_7MouseKidneyrep_2 1.9e-25
HdgfGOBP_Response_To_Interleukin_7MouseLiverCN16-D2 2.4e-07
HdgfGOBP_Response_To_CytokineMouseLiverrep_16 1.4e-13
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseLymphMS-1 3.1e-09
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseLymphMS-1 6.1e-11
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseLymphMS-1 1.8e-10
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseLymphMS-1 2.2e-09
HdgfGOBP_Response_To_CytokineMouseLymphMS-1 5.7e-15
HdgfGOBP_Response_To_Endoplasmic_Reticulum_StressMouseLymphMS-1 1.7e-11
HdgfGOBP_Response_To_Topologically_Incorrect_ProteinMouseLymphMS-1 2.8e-07
HdgfGOBP_Cellular_Response_To_Topologically_Incorrect_ProteinMouseLymphPBS 1.2e-07
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseLymphPBS 2.4e-07
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseLungrep_1 7.5e-20
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseLungrep_1 5.8e-10
HdgfGOBP_Response_To_CytokineMouseLungrep_1 1.2e-17
HdgfGOBP_Negative_Regulation_Of_Biosynthetic_ProcessMouseBrainHP_ad_rep7 3.3e-12
HdgfGOBP_Negative_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessMouseBrainHP_ad_rep7 5.9e-11
HdgfGOBP_Negative_Regulation_Of_Transcription_By_Rna_Polymerase_IiMouseBrainHP_ad_rep7 7.1e-13
HdgfGOBP_Response_To_CytokineMouseBrainHP_ad_rep7 2.1e-08
HdgfGOBP_Ire1_Mediated_Unfolded_Protein_ResponseMouseBrainHP_adpolb_rep6 1.1e-07
HdgfGOBP_Cellular_Response_To_Topologically_Incorrect_ProteinMouseBrainHP_polb_rep9 2.8e-08
HdgfGOBP_Endoplasmic_Reticulum_Unfolded_Protein_ResponseMouseBrainHP_polb_rep9 2.7e-13
HdgfGOBP_Response_To_Endoplasmic_Reticulum_StressMouseBrainHP_polb_rep9 3.5e-12
HdgfGOBP_Response_To_Topologically_Incorrect_ProteinMouseBrainHP_polb_rep9 5.0e-08

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Hdgf function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Hdgf function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Hdgf envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Hdgf

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Hdgf

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource