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Spatial pattern gene: Palmd (spascer ID:114301) |
Gene summary for Palmd |
 Gene summary |
| Gene information | |
| Species | Mouse | Gene symbol | Palmd | Gene ID | 114301 |
| Gene name | palmdelphin |
| Synonyms | 4631423C22Rik|PALML |
| Cytomap | 3 G1|3 50.49 cM |
| Type of gene | protein-coding |
| Description | palmdelphinparalemmin-related |
| Modification date | 20220424 |
| UniProtAcc | Q9JHU2 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| Palmd | GO:0005737 | cytoplasm | 21873635 | Component |
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Spatial pattern events for Palmd |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| Palmd | Mouse | Brain | S1 | 34413515 | 5.95e-09 |
| Palmd | Mouse | Brain | S2 | 34413515 | 2.85e-15 |
| Palmd | Mouse | Brain | S3 | 34413515 | 1.48e-11 |
| Palmd | Mouse | Brain | S4 | 34413515 | 1.37e-15 |
| Palmd | Mouse | Brain | S6 | 34413515 | 1.46e-15 |
| Palmd | Mouse | Brain | S7 | 34413515 | 1.55e-15 |
| Palmd | Mouse | Brain | 30A | 32637622 | 1.30e-08 |
| Palmd | Mouse | Brain | rep_4 | 35141374 | 2.84e-15 |
| Palmd | Mouse | Brain | rep_1 | 33469025 | 2.22e-12 |
| Palmd | Mouse | Liver | rep_21 | 35021063 | 7.81e-09 |
| Palmd | Mouse | Brain | rep_1 | 35027729 | 5.64e-15 |
| Palmd | Mouse | Brain | rep_2 | 35027729 | 1.57e-15 |
| Palmd | Mouse | Brain | rep_3 | 35027729 | 1.32e-15 |
| Palmd | Mouse | Brain | rep_4 | 35027729 | 1.16e-06 |
| Palmd | Mouse | Brain | rep_5 | 35027729 | 2.73e-12 |
| Palmd | Mouse | Lung | rep_1 | 35290801 | 4.90e-07 |
| Palmd | Mouse | Lung | rep_3 | 35290801 | 5.85e-10 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Brain_rep_4_H&E  |  |
Brain_rep_1_H&E  | |
Liver_rep_21_H&E  | |
Brain_rep_1_H&E  |  |
Brain_rep_2_H&E  |  |
Brain_rep_3_H&E  |  |
Brain_rep_4_H&E  |  |
Brain_rep_5_H&E  |  |
Lung_rep_1_H&E  |  |
Lung_rep_3_H&E  |  |
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Spatial pattern pathway has Palmd envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Spinal cord | L7CN45_C1 | 8.5e-07 |
| Palmd | GOBP_Regulation_Of_Anatomical_Structure_Morphogenesis | Mouse | Spinal cord | L7CN45_C1 | 3.1e-08 |
| Palmd | GOBP_Regulation_Of_Cell_Morphogenesis | Mouse | Spinal cord | L7CN45_C1 | 5.6e-06 |
| Palmd | GOBP_Regulation_Of_Cell_Shape | Mouse | Spinal cord | L7CN45_C1 | 2.7e-06 |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Brain | rep_1 | 7.6e-08 |
| Palmd | GOBP_Regulation_Of_Anatomical_Structure_Morphogenesis | Mouse | Brain | rep_3 | 3.2e-44 |
| Palmd | GOBP_Regulation_Of_Cell_Morphogenesis | Mouse | Brain | rep_3 | 5.0e-45 |
| Palmd | GOBP_Regulation_Of_Cell_Shape | Mouse | Brain | rep_3 | 2.1e-19 |
| Palmd | GOBP_Regulation_Of_Cell_Shape | Mouse | Embryo | rep_14 | 5.1e-07 |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Embryo | rep_5 | 2.2e-13 |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Kidney | Nep | 1.1e-16 |
| Palmd | GOBP_Regulation_Of_Anatomical_Structure_Morphogenesis | Mouse | Kidney | Nep | 1.3e-32 |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Kidney | rep_2 | 1.7e-84 |
| Palmd | GOBP_Regulation_Of_Anatomical_Structure_Morphogenesis | Mouse | Kidney | rep_2 | 1.3e-133 |
| Palmd | GOBP_Regulation_Of_Cell_Morphogenesis | Mouse | Kidney | rep_2 | 1.9e-85 |
| Palmd | GOBP_Regulation_Of_Cell_Shape | Mouse | Kidney | rep_2 | 3.0e-66 |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Lymph | MS-1 | 3.9e-13 |
| Palmd | GOBP_Regulation_Of_Anatomical_Structure_Morphogenesis | Mouse | Lymph | MS-1 | 2.4e-16 |
| Palmd | GOBP_Regulation_Of_Cell_Morphogenesis | Mouse | Lymph | MS-1 | 2.2e-13 |
| Palmd | GOBP_Regulation_Of_Cell_Shape | Mouse | Lymph | MS-1 | 5.2e-14 |
| Palmd | GOBP_Cell_Morphogenesis | Mouse | Brain | HP_ad_rep7 | 8.4e-10 |
| Palmd | GOBP_Regulation_Of_Anatomical_Structure_Morphogenesis | Mouse | Brain | HP_ad_rep7 | 3.3e-08 |
| Palmd | GOBP_Regulation_Of_Cell_Shape | Mouse | Brain | HP_polb_rep9 | 2.9e-08 |
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Palmd function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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Palmd function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for Palmd envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for Palmd |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for Palmd |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
| Palmd | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
