Home

Download & Upload

Statistics

Landscape

Help

Contact

	Gene summary
	Spatial pattern genes
	Spatial pattern pathway
	Cell cell interactions using single cell data
	Cell-cell/spot-spot interactions using spatial data
	Transcription factors events
	Related drugs with this gene
	Related diseases with this gene

Spatial pattern gene: Rnf187 (spascer ID:108660)

Gene summary for Rnf187

Gene summary

Gene information
	Species	Mouse
	Gene symbol	Rnf187
	Gene ID	108660
	Gene name	ring finger protein 187
	Synonyms	2410016F01Rik\|AB030190\|RACO-1
	Cytomap	11\|11 B1.3
	Type of gene	protein-coding
	Description	E3 ubiquitin-protein ligase RNF187RING domain AP1 coactivator 1RING-type E3 ubiquitin transferase RNF187protein RNF187
	Modification date	20220424
	UniProtAcc	Q8BFX1

Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).

Gene	GO ID	GO term	PubMed ID	Category
Rnf187	GO:0005737	cytoplasm	21873635	Component
Rnf187	GO:0010468	regulation of gene expression	21873635	Process
Rnf187	GO:0016567	protein ubiquitination	21873635	Process
Rnf187	GO:0045087	innate immune response	21873635	Process
Rnf187	GO:0061630	ubiquitin protein ligase activity	21873635	Function

Top

Spatial pattern events for Rnf187

spatial pattern gene list.

Gene symbol	Species	Tissue	Replication	PMID	Adj p-value
Rnf187	Mouse	Brain	S1	34413515	2.07e-15
Rnf187	Mouse	Brain	S2	34413515	1.56e-15
Rnf187	Mouse	Brain	S3	34413515	1.64e-15
Rnf187	Mouse	Brain	S4	34413515	1.37e-15
Rnf187	Mouse	Brain	S6	34413515	1.46e-15
Rnf187	Mouse	Brain	S7	34413515	2.15e-14
Rnf187	Mouse	Brain	11A	32637622	1.39e-06
Rnf187	Mouse	Brain	23B	32637622	8.24e-06
Rnf187	Mouse	Brain	24A	32637622	1.97e-06
Rnf187	Mouse	Brain	24B	32637622	2.64e-06
Rnf187	Mouse	Brain	27B	32637622	2.46e-07
Rnf187	Mouse	Brain	28A	32637622	3.64e-07
Rnf187	Mouse	Brain	29A	32637622	4.78e-07
Rnf187	Mouse	Brain	29B	32637622	1.78e-08
Rnf187	Mouse	Brain	32A	32637622	6.73e-06
Rnf187	Mouse	Brain	rep_1	35141374	2.02e-15
Rnf187	Mouse	Brain	rep_2	35141374	1.69e-15
Rnf187	Mouse	Brain	rep_3	35141374	1.64e-15
Rnf187	Mouse	Brain	rep_4	35141374	1.57e-15
Rnf187	Mouse	Brain	rep_5	35141374	1.47e-15
Rnf187	Mouse	Brain	rep_6	35141374	1.73e-15
Rnf187	Mouse	Embryo	rep_13	33188776	3.17e-08
Rnf187	Mouse	Kidney	IRI	34003797	3.17e-06
Rnf187	Mouse	Kidney	rep_1	34853151	2.42e-15
Rnf187	Mouse	Kidney	rep_2	34853151	3.97e-14
Rnf187	Mouse	Kidney	rep_3	34853151	2.20e-06
Rnf187	Mouse	Brain	rep_1	33469025	1.30e-15
Rnf187	Mouse	Brain	rep_1	35027729	1.66e-15
Rnf187	Mouse	Brain	rep_2	35027729	1.57e-15
Rnf187	Mouse	Brain	rep_3	35027729	1.32e-15
Rnf187	Mouse	Brain	rep_4	35027729	3.10e-15
Rnf187	Mouse	Brain	rep_5	35027729	1.46e-15
Rnf187	Mouse	Intestine	rep_3	35149721	7.78e-07
Rnf187	Mouse	Intestine	rep_4	35149721	4.87e-14
Rnf187	Mouse	Brain	B02_D1	32702314	1.40e-12
Rnf187	Mouse	Brain	B02_E1	32702314	1.33e-14
Rnf187	Mouse	Brain	B04_E1	32702314	1.28e-06
Rnf187	Mouse	Brain	B05_D2	32702314	1.07e-06
Rnf187	Mouse	Brain	B05_E2	32702314	2.42e-14
Rnf187	Mouse	Brain	B07_C2	32702314	2.72e-08
Rnf187	Mouse	Brain	N04_D1	32702314	5.76e-06
Rnf187	Mouse	Brain	rep_1	35210624	1.74e-15
Rnf187	Mouse	Brain	rep_2	35210624	1.74e-15
Rnf187	Mouse	Brain	rep_3	35210624	1.82e-15
Rnf187	Mouse	Brain	rep_4	35210624	4.16e-15
Rnf187	Mouse	Brain	rep_5	35210624	2.07e-15
Rnf187	Mouse	Brain	rep_6	35210624	2.05e-15
Rnf187	Mouse	Brain	rep_7	35210624	3.31e-15

spatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)	Singel gene map
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Brain_rep_6_H&E
Kidney_IRI_H&E
Kidney_rep_1_H&E
Kidney_rep_2_H&E
Kidney_rep_3_H&E
Brain_rep_1_H&E
Brain_rep_1_H&E
Brain_rep_2_H&E
Brain_rep_3_H&E
Brain_rep_4_H&E
Brain_rep_5_H&E
Brain_B02_D1_H&E
Brain_B02_E1_H&E
Brain_B04_E1_H&E
Brain_B05_D2_H&E
Brain_B05_E2_H&E
Brain_B07_C2_H&E
Brain_N04_D1_H&E

Top

Spatial pattern pathway has Rnf187 envolved

Symbol	Pathway	Species	Tissue type	Replication	P-value
Rnf187	GOBP_Protein_Autoubiquitination	Mouse	Spinal cord	L7bCN02_E1	9.6e-06
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Spinal cord	L7bCN02_E1	2.8e-06
Rnf187	GOBP_Macromolecule_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	7.5e-06
Rnf187	GOBP_Modification_Dependent_Macromolecule_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	2.7e-07
Rnf187	GOBP_Organonitrogen_Compound_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	5.1e-08
Rnf187	GOBP_Protein_Catabolic_Process	Mouse	Spinal cord	L7CN45_C1	5.6e-06
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Spinal cord	L7CN45_C1	8.0e-06
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation	Mouse	Spinal cord	L7CN45_C1	2.2e-07
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation_Or_Removal	Mouse	Spinal cord	L7CN45_C1	1.4e-06
Rnf187	GOBP_Proteolysis	Mouse	Spinal cord	L7CN45_C1	1.1e-06
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Spinal cord	L7CN97_E2	7.9e-07
Rnf187	GOBP_Innate_Immune_Response	Mouse	Spinal cord	L7CN97_E2	2.7e-06
Rnf187	GOBP_Defense_Response	Mouse	Spinal cord	L8CN11_C1	3.3e-17
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Spinal cord	L8CN14_E2	8.1e-17
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Brain	rep_27	1.1e-05
Rnf187	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Brain	rep_1	2.5e-12
Rnf187	GOBP_Protein_Autoubiquitination	Mouse	Brain	rep_1	1.3e-07
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Brain	rep_1	2.1e-07
Rnf187	GOBP_Cellular_Protein_Catabolic_Process	Mouse	Brain	rep_3	2.9e-162
Rnf187	GOBP_Defense_Response	Mouse	Brain	rep_3	8.7e-77
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Brain	rep_3	6.0e-105
Rnf187	GOBP_Innate_Immune_Response	Mouse	Brain	rep_3	7.5e-97
Rnf187	GOBP_Macromolecule_Catabolic_Process	Mouse	Brain	rep_3	1.7e-159
Rnf187	GOBP_Modification_Dependent_Macromolecule_Catabolic_Process	Mouse	Brain	rep_3	8.7e-167
Rnf187	GOBP_Organonitrogen_Compound_Catabolic_Process	Mouse	Brain	rep_3	7.1e-166
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Brain	rep_3	8.8e-172
Rnf187	GOBP_Proteasomal_Protein_Catabolic_Process	Mouse	Brain	rep_3	2.9e-169
Rnf187	GOBP_Protein_Catabolic_Process	Mouse	Brain	rep_3	3.0e-174
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Brain	rep_3	1.4e-177
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation	Mouse	Brain	rep_3	1.4e-184
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation_Or_Removal	Mouse	Brain	rep_3	6.3e-190
Rnf187	GOBP_Proteolysis	Mouse	Brain	rep_3	1.8e-168
Rnf187	GOBP_Protein_Autoubiquitination	Mouse	Embryo	rep_14	2.7e-27
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Embryo	rep_14	5.1e-11
Rnf187	GOBP_Defense_Response	Mouse	Embryo	rep_1	5.2e-63
Rnf187	GOBP_Modification_Dependent_Macromolecule_Catabolic_Process	Mouse	Embryo	rep_1	7.5e-10
Rnf187	GOBP_Organonitrogen_Compound_Catabolic_Process	Mouse	Embryo	rep_1	5.7e-21
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Embryo	rep_1	7.1e-65
Rnf187	GOBP_Protein_Catabolic_Process	Mouse	Embryo	rep_1	4.1e-19
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation_Or_Removal	Mouse	Embryo	rep_1	4.4e-16
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Embryo	rep_3	2.6e-164
Rnf187	GOBP_Innate_Immune_Response	Mouse	Embryo	rep_3	2.0e-259
Rnf187	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Embryo	rep_3	0.0e+00
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation	Mouse	Embryo	rep_3	4.2e-21
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Embryo	rep_6	1.0e-23
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Kidney	Nep	2.0e-14
Rnf187	GOBP_Proteolysis	Mouse	Kidney	Nep	6.8e-23
Rnf187	GOBP_Cellular_Protein_Catabolic_Process	Mouse	Kidney	rep_2	3.2e-21
Rnf187	GOBP_Defense_Response	Mouse	Kidney	rep_2	6.8e-127
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Kidney	rep_2	2.3e-129
Rnf187	GOBP_Innate_Immune_Response	Mouse	Kidney	rep_2	3.1e-117
Rnf187	GOBP_Macromolecule_Catabolic_Process	Mouse	Kidney	rep_2	7.0e-40
Rnf187	GOBP_Modification_Dependent_Macromolecule_Catabolic_Process	Mouse	Kidney	rep_2	1.0e-26
Rnf187	GOBP_Organonitrogen_Compound_Catabolic_Process	Mouse	Kidney	rep_2	1.2e-14
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Kidney	rep_2	3.8e-57
Rnf187	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Kidney	rep_2	4.5e-10
Rnf187	GOBP_Proteasomal_Protein_Catabolic_Process	Mouse	Kidney	rep_2	5.3e-33
Rnf187	GOBP_Protein_Autoubiquitination	Mouse	Kidney	rep_2	6.9e-66
Rnf187	GOBP_Protein_Catabolic_Process	Mouse	Kidney	rep_2	7.3e-30
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Kidney	rep_2	1.0e-59
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Kidney	rep_2	4.9e-79
Rnf187	GOBP_Proteolysis	Mouse	Kidney	rep_2	6.0e-106
Rnf187	GOBP_Defense_Response	Mouse	Liver	rep_16	8.0e-16
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Liver	rep_16	1.8e-13
Rnf187	GOBP_Innate_Immune_Response	Mouse	Liver	rep_16	5.5e-09
Rnf187	GOBP_Cellular_Protein_Catabolic_Process	Mouse	Lymph	MS-1	1.1e-11
Rnf187	GOBP_Defense_Response	Mouse	Lymph	MS-1	8.6e-18
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Lymph	MS-1	6.7e-20
Rnf187	GOBP_Innate_Immune_Response	Mouse	Lymph	MS-1	6.7e-20
Rnf187	GOBP_Macromolecule_Catabolic_Process	Mouse	Lymph	MS-1	1.2e-13
Rnf187	GOBP_Modification_Dependent_Macromolecule_Catabolic_Process	Mouse	Lymph	MS-1	1.1e-11
Rnf187	GOBP_Organonitrogen_Compound_Catabolic_Process	Mouse	Lymph	MS-1	1.2e-13
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Lymph	MS-1	2.3e-12
Rnf187	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Lymph	MS-1	4.4e-12
Rnf187	GOBP_Protein_Autoubiquitination	Mouse	Lymph	MS-1	8.6e-10
Rnf187	GOBP_Protein_Catabolic_Process	Mouse	Lymph	MS-1	1.1e-11
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Lymph	MS-1	9.3e-18
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation	Mouse	Lymph	MS-1	1.4e-09
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation_Or_Removal	Mouse	Lymph	MS-1	1.4e-09
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Lymph	MS-1	3.6e-11
Rnf187	GOBP_Proteolysis	Mouse	Lymph	MS-1	2.8e-10
Rnf187	GOBP_Macromolecule_Catabolic_Process	Mouse	Lung	rep_1	2.0e-21
Rnf187	GOBP_Protein_Autoubiquitination	Mouse	Brain	rep_4	1.6e-07
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Brain	rep_4	1.1e-07
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Brain	rep_4	1.0e-15
Rnf187	GOBP_Defense_Response	Mouse	Brain	HP_ad_rep7	5.6e-10
Rnf187	GOBP_Macromolecule_Catabolic_Process	Mouse	Brain	HP_ad_rep7	1.3e-09
Rnf187	GOBP_Modification_Dependent_Macromolecule_Catabolic_Process	Mouse	Brain	HP_ad_rep7	1.3e-08
Rnf187	GOBP_Organonitrogen_Compound_Catabolic_Process	Mouse	Brain	HP_ad_rep7	3.3e-07
Rnf187	GOBP_Positive_Regulation_Of_Cell_Population_Proliferation	Mouse	Brain	HP_ad_rep7	1.9e-10
Rnf187	GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process	Mouse	Brain	HP_ad_rep7	2.8e-11
Rnf187	GOBP_Protein_Catabolic_Process	Mouse	Brain	HP_ad_rep7	3.3e-07
Rnf187	GOBP_Protein_K48_Linked_Ubiquitination	Mouse	Brain	HP_ad_rep7	1.4e-14
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation	Mouse	Brain	HP_ad_rep7	1.7e-09
Rnf187	GOBP_Protein_Modification_By_Small_Protein_Conjugation_Or_Removal	Mouse	Brain	HP_ad_rep7	6.9e-09
Rnf187	GOBP_Protein_Polyubiquitination	Mouse	Brain	HP_ad_rep7	1.4e-10
Rnf187	GOBP_Proteolysis	Mouse	Brain	HP_ad_rep7	3.3e-07
Rnf187	GOBP_Cellular_Protein_Catabolic_Process	Mouse	Brain	HP_adpolb_rep1	7.2e-07
Rnf187	GOBP_Proteasomal_Protein_Catabolic_Process	Mouse	Brain	HP_adpolb_rep1	1.1e-07
Rnf187	GOBP_Defense_Response_To_Other_Organism	Mouse	Brain	HP_polb_rep9	2.1e-11
Rnf187	GOBP_Innate_Immune_Response	Mouse	Brain	HP_polb_rep9	3.9e-11

Top

Rnf187 function as liang/receptor in single cell data

Tissue

Source

SourceCell

Target

TargetCell

PMID

Group

Top

Rnf187 function as liang/receptor across spatial transcriptomics tissue

Interactions using deconvoluted spatial data.

Ligand

Receptor

LR pair

Tissue

Replication

Top

Transcription factor for Rnf187 envolved

Transcription factor analysis using single cell data.

Tissue

Group

Cell types

Target genes

Rss score

Motif information.

Top

Related Drugs for Rnf187

Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

Related Diseases for Rnf187

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

Pubmeds

Source