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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Spatial pattern gene: Xylb (spascer ID:102448)

Gene summary for Xylb

check button Gene summary
Gene information
SpeciesMouse
Gene symbol

Xylb

Gene ID

102448

Gene namexylulokinase homolog (H. influenzae)
SynonymsAI132223|AI327421
Cytomap9|9 F3
Type of geneprotein-coding
Descriptionxylulose kinase
Modification date20220503
UniProtAcc

Q3TNA1


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
Xylb

GO:0004856

xylulokinase activity

21873635

Function
Xylb

GO:0005829

cytosol

21873635

Component
Xylb

GO:0005997

xylulose metabolic process

21873635

Process
Xylb

GO:0016310

phosphorylation

21873635

Process
Xylb

GO:0016773

phosphotransferase activity, alcohol group as acceptor

21873635

Function

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Spatial pattern events for Xylb

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
XylbMouseKidneyCLP 340037972.19e-15
XylbMouseKidneyIRI 340037972.29e-15
XylbMouseKidneySham 340037972.58e-15
XylbMouseKidneyrep_1 348531512.42e-15
XylbMouseKidneyrep_2 348531515.42e-15
XylbMouseKidneyrep_3 348531512.94e-15
XylbMouseKidneyrep_4 348531514.07e-15
XylbMouseKidneyrep_5 348531513.18e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Kidney_CLP_H&E
boxplot

boxplot
Kidney_IRI_H&E
boxplot

boxplot
Kidney_Sham_H&E
boxplot

boxplot
Kidney_rep_1_H&E
boxplot

boxplot
Kidney_rep_2_H&E
boxplot

boxplot
Kidney_rep_3_H&E
boxplot

boxplot
Kidney_rep_4_H&E
boxplot

boxplot
Kidney_rep_5_H&E
boxplot

boxplot


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Spatial pattern pathway has Xylb envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
XylbGOBP_Organic_Acid_Catabolic_ProcessMouseSpinal cordCN94_E1 3.5e-07
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseSpinal cordL7bCN02_E1 8.3e-06
XylbGOBP_Organic_Acid_Metabolic_ProcessMouseSpinal cordL7bCN02_E1 7.1e-06
XylbGOBP_Pentose_Catabolic_ProcessMouseSpinal cordL7CN32_C1 3.3e-10
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseSpinal cordL7CN45_C1 1.6e-07
XylbGOBP_Carbohydrate_Derivative_Metabolic_ProcessMouseSpinal cordL7CN45_C1 1.8e-07
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseSpinal cordL7CN45_C1 4.6e-08
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseSpinal cordL7CN45_C1 2.2e-08
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseSpinal cordL7CN45_C1 1.7e-07
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseSpinal cordL7CN45_C1 6.2e-09
XylbGOBP_Monosaccharide_Catabolic_ProcessMouseSpinal cordL7CN45_C1 1.3e-07
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseSpinal cordL7CN45_C1 5.1e-06
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseSpinal cordL7CN45_C1 1.7e-07
XylbGOBP_Organophosphate_Metabolic_ProcessMouseSpinal cordL7CN45_C1 2.0e-07
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseSpinal cordL7CN45_C1 4.6e-07
XylbGOBP_Small_Molecule_Metabolic_ProcessMouseSpinal cordL7CN45_C1 1.7e-07
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseSpinal cordL7CN45_C1 1.1e-08
XylbGOBP_Cellular_Carbohydrate_Metabolic_ProcessMouseSpinal cordL7CN47_C1 4.1e-06
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseBrainrep_11 2.7e-06
XylbGOBP_Carbohydrate_PhosphorylationMouseBrainrep_37 3.7e-05
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseBrainrep_71 2.1e-06
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseBrainrep_71 8.1e-05
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseBrainrep_75 7.4e-05
XylbGOBP_Cellular_Carbohydrate_Metabolic_ProcessMouseBrainrep_1 7.7e-17
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseBrainrep_1 5.4e-15
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseBrainrep_3 5.9e-70
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseBrainrep_3 2.7e-27
XylbGOBP_Carbohydrate_Derivative_Metabolic_ProcessMouseBrainrep_3 4.5e-61
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseBrainrep_3 1.4e-74
XylbGOBP_Carbohydrate_PhosphorylationMouseBrainrep_31.9e-157
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseBrainrep_32.0e-175
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseBrainrep_33.2e-119
XylbGOBP_Monosaccharide_Catabolic_ProcessMouseBrainrep_3 2.0e-31
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseBrainrep_3 9.2e-62
XylbGOBP_Organic_Acid_Catabolic_ProcessMouseBrainrep_39.6e-181
XylbGOBP_Organic_Acid_Metabolic_ProcessMouseBrainrep_31.5e-154
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseBrainrep_3 2.9e-25
XylbGOBP_Organophosphate_Metabolic_ProcessMouseBrainrep_3 8.1e-43
XylbGOBP_Pentose_Catabolic_ProcessMouseBrainrep_3 6.2e-37
XylbGOBP_Pentose_Metabolic_ProcessMouseBrainrep_3 1.3e-39
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseBrainrep_39.8e-142
XylbGOBP_Small_Molecule_Metabolic_ProcessMouseBrainrep_3 2.7e-19
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseBrainrep_31.6e-118
XylbGOBP_Carbohydrate_PhosphorylationMouseEmbryorep_6 1.0e-27
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseEmbryorep_14 2.1e-54
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseEmbryorep_14 4.5e-09
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseEmbryorep_14 1.1e-08
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseEmbryorep_14 2.9e-37
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseEmbryorep_14 7.1e-14
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseEmbryorep_14 7.3e-13
XylbGOBP_Monosaccharide_Catabolic_ProcessMouseEmbryorep_14 1.3e-52
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseEmbryorep_14 3.9e-21
XylbGOBP_Organic_Acid_Catabolic_ProcessMouseEmbryorep_14 2.3e-13
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseEmbryorep_14 1.8e-11
XylbGOBP_Organophosphate_Metabolic_ProcessMouseEmbryorep_14 2.0e-09
XylbGOBP_Pentose_Catabolic_ProcessMouseEmbryorep_14 3.2e-49
XylbGOBP_Pentose_Metabolic_ProcessMouseEmbryorep_14 5.9e-53
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseEmbryorep_14 7.6e-14
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseEmbryorep_14 8.3e-50
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseEmbryorep_1 5.6e-24
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseEmbryorep_1 6.0e-95
XylbGOBP_Small_Molecule_Metabolic_ProcessMouseEmbryorep_1 1.4e-55
XylbGOBP_Organic_Acid_Metabolic_ProcessMouseEmbryorep_3 1.4e-07
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseEmbryorep_32.9e-170
XylbGOBP_Cellular_Carbohydrate_Metabolic_ProcessMouseEmbryorep_4 9.7e-43
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseEmbryorep_4 0.0e+00
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseKidneyrep_22.8e-126
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseKidneyrep_2 1.3e-08
XylbGOBP_Carbohydrate_Derivative_Metabolic_ProcessMouseKidneyrep_2 2.5e-42
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseKidneyrep_2 5.2e-99
XylbGOBP_Carbohydrate_PhosphorylationMouseKidneyrep_2 2.5e-25
XylbGOBP_Cellular_Carbohydrate_Metabolic_ProcessMouseKidneyrep_2 2.0e-96
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseKidneyrep_2 3.3e-14
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseKidneyrep_2 2.6e-58
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseKidneyrep_2 4.4e-73
XylbGOBP_Monosaccharide_Catabolic_ProcessMouseKidneyrep_2 1.7e-42
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseKidneyrep_24.3e-127
XylbGOBP_Organic_Acid_Catabolic_ProcessMouseKidneyrep_2 1.3e-83
XylbGOBP_Organic_Acid_Metabolic_ProcessMouseKidneyrep_2 3.8e-62
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseKidneyrep_2 1.2e-09
XylbGOBP_Organophosphate_Metabolic_ProcessMouseKidneyrep_2 1.7e-41
XylbGOBP_Pentose_Catabolic_ProcessMouseKidneyrep_2 2.6e-84
XylbGOBP_Pentose_Metabolic_ProcessMouseKidneyrep_2 2.0e-71
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseKidneyrep_2 4.4e-89
XylbGOBP_Small_Molecule_Metabolic_ProcessMouseKidneyrep_2 1.8e-43
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseKidneyrep_21.7e-195
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseLiverCN16-D1 1.5e-07
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseLiverCN16-E1 4.9e-08
XylbGOBP_Pentose_Catabolic_ProcessMouseLiverCN65-C1 9.0e-08
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseLiverCN73-C1 3.2e-07
XylbGOBP_Carbohydrate_Derivative_Metabolic_ProcessMouseLiverCN73-C1 5.1e-08
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseLiverCN73-C1 3.0e-11
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseLiverrep_16 2.6e-08
XylbGOBP_Carbohydrate_PhosphorylationMouseLiverrep_16 2.4e-15
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseLiverrep_16 7.4e-11
XylbGOBP_Pentose_Catabolic_ProcessMouseLiverrep_16 5.3e-13
XylbGOBP_Pentose_Metabolic_ProcessMouseLiverrep_16 8.4e-17
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseIntestinerep_2 1.5e-14
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseLymphMS-1 1.6e-09
XylbGOBP_Carbohydrate_Derivative_Metabolic_ProcessMouseLymphMS-1 2.8e-10
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseLymphMS-1 5.9e-10
XylbGOBP_Cellular_Carbohydrate_Metabolic_ProcessMouseLymphMS-1 8.5e-07
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseLymphMS-1 4.8e-07
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseLymphMS-1 1.3e-15
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseLymphMS-1 9.5e-09
XylbGOBP_Organic_Acid_Catabolic_ProcessMouseLymphMS-1 4.1e-10
XylbGOBP_Organic_Acid_Metabolic_ProcessMouseLymphMS-1 1.3e-15
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseLymphMS-1 6.7e-07
XylbGOBP_Organophosphate_Metabolic_ProcessMouseLymphMS-1 7.3e-07
XylbGOBP_Pentose_Metabolic_ProcessMouseLymphMS-1 3.7e-08
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseLymphMS-1 5.1e-07
XylbGOBP_Small_Molecule_Metabolic_ProcessMouseLymphMS-1 2.6e-11
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseLymphMS-1 1.9e-07
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseBrainrep_4 8.7e-07
XylbGOBP_Carbohydrate_PhosphorylationMouseBrainrep_4 1.0e-37
XylbGOBP_Monosaccharide_Catabolic_ProcessMouseBrainrep_4 8.7e-29
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseBrainrep_4 3.9e-10
XylbGOBP_Pentose_Catabolic_ProcessMouseBrainHP_ad_rep3 6.1e-20
XylbGOBP_Carbohydrate_Derivative_Biosynthetic_ProcessMouseBrainHP_ad_rep7 9.8e-07
XylbGOBP_Cellular_Carbohydrate_Metabolic_ProcessMouseBrainHP_ad_rep7 2.3e-08
XylbGOBP_Monocarboxylic_Acid_Catabolic_ProcessMouseBrainHP_ad_rep7 3.1e-10
XylbGOBP_Monosaccharide_Catabolic_ProcessMouseBrainHP_ad_rep7 1.3e-13
XylbGOBP_Organic_Acid_Catabolic_ProcessMouseBrainHP_ad_rep7 2.2e-13
XylbGOBP_Organic_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 4.1e-08
XylbGOBP_Organophosphate_Biosynthetic_ProcessMouseBrainHP_ad_rep7 3.2e-11
XylbGOBP_Small_Molecule_Catabolic_ProcessMouseBrainHP_ad_rep7 2.3e-11
XylbGOBP_Uronic_Acid_Metabolic_ProcessMouseBrainHP_ad_rep7 1.9e-10
XylbGOBP_Pentose_Metabolic_ProcessMouseBrainHP_ad_rep8 4.2e-07
XylbGOBP_Carbohydrate_Catabolic_ProcessMouseBrainHP_polb_rep9 1.6e-10
XylbGOBP_Carbohydrate_Derivative_Metabolic_ProcessMouseBrainHP_polb_rep9 5.2e-12
XylbGOBP_Carbohydrate_Metabolic_ProcessMouseBrainHP_polb_rep9 1.6e-09
XylbGOBP_Carbohydrate_PhosphorylationMouseBrainHP_polb_rep9 1.1e-10
XylbGOBP_Generation_Of_Precursor_Metabolites_And_EnergyMouseBrainHP_polb_rep9 5.4e-11
XylbGOBP_Monocarboxylic_Acid_Metabolic_ProcessMouseBrainHP_polb_rep9 1.7e-11
XylbGOBP_Monosaccharide_Metabolic_ProcessMouseBrainHP_polb_rep9 1.7e-09
XylbGOBP_Organophosphate_Metabolic_ProcessMouseBrainHP_polb_rep9 7.1e-09
XylbGOBP_Small_Molecule_Metabolic_ProcessMouseBrainHP_polb_rep9 2.0e-09

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Xylb function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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Xylb function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for Xylb envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for Xylb

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for Xylb

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource
XylbC0019193Hepatitis, Toxic1CTD_human
XylbC0860207Drug-Induced Liver Disease1CTD_human
XylbC1262760Hepatitis, Drug-Induced1CTD_human
XylbC3658290Drug-Induced Acute Liver Injury1CTD_human
XylbC4277682Chemical and Drug Induced Liver Injury1CTD_human
XylbC4279912Chemically-Induced Liver Toxicity1CTD_human