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Spatial pattern gene: TRAPPC2 (spascer ID:6399) |
Gene summary for TRAPPC2 |
 Gene summary |
| Gene information | |
| Species | Human | Gene symbol | TRAPPC2 | Gene ID | 6399 |
| Gene name | trafficking protein particle complex subunit 2 |
| Synonyms | MIP2A|SEDL|SEDT|TRAPPC2P1|TRS20|ZNF547L|hYP38334 |
| Cytomap | Xp22.2 |
| Type of gene | protein-coding |
| Description | trafficking protein particle complex subunit 2sedlintrafficking protein particle complex 2 |
| Modification date | 20220513 |
| UniProtAcc | P0DI81 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| TRAPPC2 | GO:0005634 | nucleus | 21873635 | Component |
| TRAPPC2 | GO:0005737 | cytoplasm | 21873635 | Component |
| TRAPPC2 | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | 21873635 | Process |
| TRAPPC2 | GO:0030008 | TRAPP complex | 21873635 | Component |
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Spatial pattern events for TRAPPC2 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| TRAPPC2 | Human | Liver | rep_liver1 | 34417225 | 6.24e-06 |
| TRAPPC2 | Human | Liver | rep_liver2 | 34417225 | 6.98e-16 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Liver_rep_liver1_H&E  |  |
Liver_rep_liver2_H&E  |  |
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Spatial pattern pathway has TRAPPC2 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| TRAPPC2 | GOBP_Skeletal_System_Development | Human | Bladder | rep_2 | 2.5e-15 |
| TRAPPC2 | GOBP_Copii_Coated_Vesicle_Budding | Human | Intestine | A3 | 3.5e-11 |
| TRAPPC2 | GOBP_Establishment_Of_Organelle_Localization | Human | Intestine | A3 | 9.7e-13 |
| TRAPPC2 | GOBP_Golgi_Vesicle_Transport | Human | Intestine | A3 | 9.2e-10 |
| TRAPPC2 | GOBP_Intracellular_Transport | Human | Intestine | A3 | 7.6e-15 |
| TRAPPC2 | GOBP_Membrane_Organization | Human | Intestine | A3 | 2.7e-18 |
| TRAPPC2 | GOBP_Organelle_Localization | Human | Intestine | A3 | 5.1e-12 |
| TRAPPC2 | GOBP_Vesicle_Localization | Human | Intestine | A3 | 1.3e-07 |
| TRAPPC2 | GOBP_Vesicle_Organization | Human | Intestine | A3 | 3.0e-15 |
| TRAPPC2 | GOBP_Vesicle_Targeting | Human | Intestine | A3 | 4.2e-07 |
| TRAPPC2 | GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_Transport | Human | Intestine | A8 | 2.4e-10 |
| TRAPPC2 | GOBP_Vesicle_Budding_From_Membrane | Human | Intestine | A8 | 4.3e-15 |
| TRAPPC2 | GOBP_Vesicle_Targeting_To_From_Or_Within_Golgi | Human | Intestine | A8 | 2.6e-12 |
| TRAPPC2 | GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_Transport | Human | Pancreas | PDAC-B-st1 | 9.2e-05 |
| TRAPPC2 | GOBP_Copii_Coated_Vesicle_Budding | Human | Uterus | rep_26 | 2.0e-14 |
| TRAPPC2 | GOBP_Golgi_Vesicle_Transport | Human | Uterus | rep_26 | 3.4e-14 |
| TRAPPC2 | GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_Transport | Human | Uterus | rep_29 | 6.3e-06 |
| TRAPPC2 | GOBP_Establishment_Of_Organelle_Localization | Human | Breast | rep_1 | 6.5e-08 |
| TRAPPC2 | GOBP_Organelle_Localization | Human | Breast | rep_1 | 1.8e-08 |
| TRAPPC2 | GOBP_Vesicle_Budding_From_Membrane | Human | Breast | rep_1 | 1.7e-07 |
| TRAPPC2 | GOBP_Vesicle_Localization | Human | Breast | rep_1 | 7.0e-11 |
| TRAPPC2 | GOBP_Vesicle_Organization | Human | Breast | rep_1 | 8.3e-15 |
| TRAPPC2 | GOBP_Copii_Coated_Vesicle_Budding | Human | Breast | rep_6 | 2.0e-11 |
| TRAPPC2 | GOBP_Endoplasmic_Reticulum_To_Golgi_Vesicle_Mediated_Transport | Human | Breast | rep_6 | 4.9e-08 |
| TRAPPC2 | GOBP_Golgi_Vesicle_Transport | Human | Breast | rep_6 | 2.0e-08 |
| TRAPPC2 | GOBP_Intracellular_Transport | Human | Breast | rep_6 | 1.3e-08 |
| TRAPPC2 | GOBP_Vesicle_Targeting | Human | Breast | rep_6 | 3.4e-09 |
| TRAPPC2 | GOBP_Vesicle_Targeting_To_From_Or_Within_Golgi | Human | Breast | rep_6 | 6.9e-08 |
| TRAPPC2 | GOBP_Organelle_Localization | Human | Skin | P5_rep1 | 2.1e-13 |
| TRAPPC2 | GOBP_Vesicle_Localization | Human | Skin | P5_rep1 | 2.7e-08 |
| TRAPPC2 | GOBP_Vesicle_Organization | Human | Skin | P5_rep1 | 2.3e-09 |
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TRAPPC2 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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TRAPPC2 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for TRAPPC2 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for TRAPPC2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for TRAPPC2 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
| TRAPPC2 | C3541456 | Spondyloepiphyseal Dysplasia Tarda, X-Linked | 3 | CTD_human;GENOMICS_ENGLAND;UNIPROT |
