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Spatial pattern gene: SDF2 (spascer ID:6388) |
Gene summary for SDF2 |
 Gene summary |
| Gene information | |
| Species | Human | Gene symbol | SDF2 | Gene ID | 6388 |
| Gene name | stromal cell derived factor 2 |
| Synonyms | - |
| Cytomap | 17q11.2 |
| Type of gene | protein-coding |
| Description | stromal cell-derived factor 2SDF-2 |
| Modification date | 20220513 |
| UniProtAcc | Q99470 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
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Spatial pattern events for SDF2 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| SDF2 | Human | Liver | rep_liver1 | 34417225 | 4.18e-14 |
| SDF2 | Human | Liver | rep_liver2 | 34417225 | 2.49e-15 |
| SDF2 | Human | Uterus | rep_2 | 34857954 | 2.55e-15 |
| SDF2 | Human | Uterus | rep_3 | 34857954 | 2.67e-08 |
| SDF2 | Human | Breast | CID44971 | 34493872 | 8.88e-08 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Liver_rep_liver1_H&E  |  |
Liver_rep_liver2_H&E  |  |
Uterus_rep_2_H&E  |  |
Uterus_rep_3_H&E  |  |
Breast_CID44971_H&E  |  |
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Spatial pattern pathway has SDF2 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| SDF2 | GOBP_Chaperone_Cofactor_Dependent_Protein_Refolding | Human | Intestine | A3 | 6.6e-15 |
| SDF2 | GOBP_Chaperone_Mediated_Protein_Folding | Human | Intestine | A3 | 1.1e-14 |
| SDF2 | GOBP_De_Novo_Protein_Folding | Human | Intestine | A3 | 3.9e-13 |
| SDF2 | GOBP_Protein_Folding | Human | Intestine | A3 | 3.4e-14 |
| SDF2 | GOBP_Protein_Folding | Human | Pancreas | PDAC-B-st1 | 1.2e-05 |
| SDF2 | GOBP_Chaperone_Cofactor_Dependent_Protein_Refolding | Human | Uterus | rep_26 | 8.2e-11 |
| SDF2 | GOBP_De_Novo_Protein_Folding | Human | Uterus | rep_26 | 1.8e-15 |
| SDF2 | GOBP_Chaperone_Cofactor_Dependent_Protein_Refolding | Human | Breast | rep_5 | 1.3e-10 |
| SDF2 | GOBP_Chaperone_Mediated_Protein_Folding | Human | Breast | rep_5 | 2.9e-08 |
| SDF2 | GOBP_De_Novo_Protein_Folding | Human | Breast | rep_5 | 2.0e-10 |
| SDF2 | GOBP_Protein_Folding | Human | Breast | rep_5 | 6.0e-09 |
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SDF2 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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SDF2 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for SDF2 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for SDF2 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SDF2 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
