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Spatial pattern gene: POP5 (spascer ID:51367) |
Gene summary for POP5 |
 Gene summary |
| Gene information | |
| Species | Human | Gene symbol | POP5 | Gene ID | 51367 |
| Gene name | POP5 homolog, ribonuclease P/MRP subunit |
| Synonyms | HSPC004|RPP2|RPP20|hPop5 |
| Cytomap | 12q24.31 |
| Type of gene | protein-coding |
| Description | ribonuclease P/MRP protein subunit POP5processing of precursor 5, ribonuclease P/MRP subunit |
| Modification date | 20220513 |
| UniProtAcc | Q969H6 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| POP5 | GO:0000172 | ribonuclease MRP complex | 21873635 | Component |
| POP5 | GO:0005655 | nucleolar ribonuclease P complex | 21873635 | Component |
| POP5 | GO:0006364 | rRNA processing | 21873635 | Process |
| POP5 | GO:0008033 | tRNA processing | 21873635 | Process |
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Spatial pattern events for POP5 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| POP5 | Human | Intestine | rep_colon1 | 34417225 | 1.95e-15 |
| POP5 | Human | Intestine | rep_colon4 | 34417225 | 2.36e-10 |
| POP5 | Human | Liver | rep_liver1 | 34417225 | 1.08e-15 |
| POP5 | Human | Liver | rep_liver2 | 34417225 | 6.98e-16 |
| POP5 | Human | Intestine | A2 | 33406409 | 3.87e-10 |
| POP5 | Human | Uterus | rep_1 | 34857954 | 2.38e-09 |
| POP5 | Human | Uterus | rep_3 | 34857954 | 5.81e-15 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Intestine_rep_colon1_H&E  |  |
Intestine_rep_colon4_H&E  |  |
Liver_rep_liver1_H&E  |  |
Liver_rep_liver2_H&E  |  |
Intestine_A2_H&E  |  |
Uterus_rep_1_H&E  |  |
Uterus_rep_3_H&E  |  |
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Spatial pattern pathway has POP5 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| POP5 | GOBP_Ribosome_Biogenesis | Human | Intestine | A1 | 6.5e-08 |
| POP5 | GOBP_Ncrna_Metabolic_Process | Human | Intestine | A3 | 8.6e-07 |
| POP5 | GOBP_Nucleic_Acid_Phosphodiester_Bond_Hydrolysis | Human | Intestine | A3 | 1.9e-08 |
| POP5 | GOBP_Rna_Phosphodiester_Bond_Hydrolysis | Human | Intestine | A3 | 2.3e-07 |
| POP5 | GOBP_Rna_Processing | Human | Intestine | A3 | 3.9e-09 |
| POP5 | GOBP_Trna_Metabolic_Process | Human | Intestine | A3 | 2.5e-12 |
| POP5 | GOBP_Trna_Processing | Human | Intestine | A3 | 1.6e-08 |
| POP5 | GOBP_Rna_5_End_Processing | Human | Intestine | A8 | 5.0e-12 |
| POP5 | GOBP_Trna_5_End_Processing | Human | Intestine | A8 | 3.5e-09 |
| POP5 | GOBP_Trna_5_Leader_Removal | Human | Intestine | A8 | 1.5e-07 |
| POP5 | GOBP_Rna_Phosphodiester_Bond_Hydrolysis | Human | Pancreas | PDAC-B-st1 | 3.3e-05 |
| POP5 | GOBP_Ncrna_Processing | Human | Uterus | rep_1 | 4.5e-06 |
| POP5 | GOBP_Ribosome_Biogenesis | Human | Uterus | rep_1 | 9.5e-06 |
| POP5 | GOBP_Rrna_Metabolic_Process | Human | Uterus | rep_1 | 2.4e-07 |
| POP5 | GOBP_Trna_5_Leader_Removal | Human | Uterus | rep_25 | 4.8e-06 |
| POP5 | GOBP_Rna_Phosphodiester_Bond_Hydrolysis_Endonucleolytic | Human | Uterus | rep_26 | 3.6e-07 |
| POP5 | GOBP_Trna_Metabolic_Process | Human | Uterus | rep_26 | 9.4e-08 |
| POP5 | GOBP_Trna_5_End_Processing | Human | Breast | rep_1 | 6.1e-23 |
| POP5 | GOBP_Trna_5_Leader_Removal | Human | Breast | rep_1 | 3.1e-27 |
| POP5 | GOBP_Ncrna_Metabolic_Process | Human | Breast | rep_6 | 1.9e-04 |
| POP5 | GOBP_Ncrna_Processing | Human | Breast | rep_6 | 1.3e-05 |
| POP5 | GOBP_Nucleic_Acid_Phosphodiester_Bond_Hydrolysis | Human | Breast | rep_6 | 2.6e-05 |
| POP5 | GOBP_Ribonucleoprotein_Complex_Biogenesis | Human | Breast | rep_6 | 1.3e-07 |
| POP5 | GOBP_Ribosome_Biogenesis | Human | Breast | rep_6 | 2.0e-06 |
| POP5 | GOBP_Rna_Phosphodiester_Bond_Hydrolysis | Human | Breast | rep_6 | 2.8e-06 |
| POP5 | GOBP_Rna_Phosphodiester_Bond_Hydrolysis_Endonucleolytic | Human | Breast | rep_6 | 3.0e-08 |
| POP5 | GOBP_Rna_Processing | Human | Breast | rep_6 | 3.5e-06 |
| POP5 | GOBP_Rrna_Metabolic_Process | Human | Breast | rep_6 | 4.0e-06 |
| POP5 | GOBP_Trna_Metabolic_Process | Human | Breast | rep_6 | 3.9e-05 |
| POP5 | GOBP_Trna_Processing | Human | Breast | rep_6 | 3.5e-08 |
| POP5 | GOBP_Trna_5_End_Processing | Human | Skin | P10_rep1 | 4.4e-12 |
| POP5 | GOBP_Rna_5_End_Processing | Human | Skin | P10_rep2 | 1.5e-12 |
| POP5 | GOBP_Rna_Phosphodiester_Bond_Hydrolysis | Human | Lung | rep_1 | 8.8e-08 |
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POP5 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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POP5 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for POP5 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for POP5 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for POP5 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
