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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

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Related drugs with this gene

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Related diseases with this gene

Spatial pattern gene: PCBD1 (spascer ID:5092)

Gene summary for PCBD1

check button Gene summary
Gene information
SpeciesHuman
Gene symbol

PCBD1

Gene ID

5092

Gene namepterin-4 alpha-carbinolamine dehydratase 1
SynonymsDCOH|PCBD|PCD|PHS
Cytomap10q22.1
Type of geneprotein-coding
Descriptionpterin-4-alpha-carbinolamine dehydratase4-alpha-hydroxy-tetrahydropterin dehydratase6-pyruvoyl-tetrahydropterin synthase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1)dimerizing cofactor for HNF1phenylalanine hydroxylase-stimulating
Modification date20220513
UniProtAcc

P61457


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
PCBD1

GO:0008124

4-alpha-hydroxytetrahydrobiopterin dehydratase activity

21873635

Function

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Spatial pattern events for PCBD1

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
PCBD1HumanBladderrep_2 343854562.57e-08
PCBD1HumanIntestinerep_colon1 344172251.95e-15
PCBD1HumanIntestinerep_colon2 344172258.12e-16
PCBD1HumanIntestinerep_colon3 344172253.51e-15
PCBD1HumanIntestinerep_colon4 344172251.73e-12
PCBD1HumanLiverrep_liver1 344172251.08e-15
PCBD1HumanLiverrep_liver2 344172256.98e-16
PCBD1HumanLiverrep_liver3 344172253.66e-08
PCBD1HumanIntestineA1 334064091.79e-12
PCBD1HumanIntestineA2 334064092.75e-14
PCBD1HumanIntestineA8 334064093.20e-06
PCBD1HumanUterusrep_3 348579541.66e-15
PCBD1HumanBreast1160920F 344938721.48e-15
PCBD1HumanBreastCID4465 344938727.83e-15
PCBD1HumanBreastCID44971 344938723.80e-12
PCBD1HumanLungrep_1 353550183.37e-06

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Bladder_rep_2_H&E
boxplot

boxplot
Intestine_rep_colon1_H&E
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Intestine_rep_colon2_H&E
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Intestine_rep_colon3_H&E
boxplot

boxplot
Intestine_rep_colon4_H&E
boxplot

boxplot
Liver_rep_liver1_H&E
boxplot

boxplot
Liver_rep_liver2_H&E
boxplot

boxplot
Liver_rep_liver3_H&E
boxplot

boxplot
Intestine_A1_H&E
boxplot

boxplot
Intestine_A2_H&E
boxplot

boxplot
Intestine_A8_H&E
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boxplot
Uterus_rep_3_H&E
boxplot

boxplot
Breast_1160920F_H&E
boxplot

boxplot
Breast_CID4465_H&E
boxplot

boxplot
Breast_CID44971_H&E
boxplot

boxplot
Lung_rep_1_H&E
boxplot

boxplot


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Spatial pattern pathway has PCBD1 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
PCBD1GOBP_Organic_Cyclic_Compound_Catabolic_ProcessHumanIntestineA3 5.9e-24
PCBD1GOBP_Organonitrogen_Compound_Catabolic_ProcessHumanIntestineA3 4.5e-13
PCBD1GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessHumanIntestineA3 5.1e-13
PCBD1GOBP_Regulation_Of_BindingHumanIntestineA3 4.9e-11
PCBD1GOBP_Regulation_Of_Protein_BindingHumanIntestineA3 4.4e-10
PCBD1GOBP_Alcohol_Biosynthetic_ProcessHumanIntestineA8 5.3e-09
PCBD1GOBP_Alpha_Amino_Acid_Metabolic_ProcessHumanIntestineA8 7.0e-13
PCBD1GOBP_Aromatic_Amino_Acid_Family_Catabolic_ProcessHumanIntestineA8 3.7e-11
PCBD1GOBP_Aromatic_Amino_Acid_Family_Metabolic_ProcessHumanIntestineA8 6.9e-12
PCBD1GOBP_Cellular_Amino_Acid_Catabolic_ProcessHumanIntestineA8 2.5e-14
PCBD1GOBP_Cellular_Amino_Acid_Metabolic_ProcessHumanIntestineA8 5.3e-13
PCBD1GOBP_Diol_Biosynthetic_ProcessHumanIntestineA8 5.7e-13
PCBD1GOBP_Diol_Metabolic_ProcessHumanIntestineA8 6.5e-11
PCBD1GOBP_L_Phenylalanine_Metabolic_ProcessHumanIntestineA8 5.5e-34
PCBD1GOBP_Organic_Acid_Catabolic_ProcessHumanIntestineA8 1.6e-12
PCBD1GOBP_Organic_Acid_Metabolic_ProcessHumanIntestineA8 2.5e-18
PCBD1GOBP_Organic_Hydroxy_Compound_Biosynthetic_ProcessHumanIntestineA8 1.2e-10
PCBD1GOBP_Organic_Hydroxy_Compound_Metabolic_ProcessHumanIntestineA8 6.4e-10
PCBD1GOBP_Polyol_Biosynthetic_ProcessHumanIntestineA8 1.3e-18
PCBD1GOBP_Polyol_Metabolic_ProcessHumanIntestineA8 6.2e-14
PCBD1GOBP_Pteridine_Containing_Compound_Metabolic_ProcessHumanIntestineA8 6.3e-16
PCBD1GOBP_Small_Molecule_Biosynthetic_ProcessHumanIntestineA8 1.0e-14
PCBD1GOBP_Small_Molecule_Catabolic_ProcessHumanIntestineA8 2.2e-13
PCBD1GOBP_Small_Molecule_Metabolic_ProcessHumanIntestineA8 2.1e-15
PCBD1GOBP_Tetrahydrobiopterin_Metabolic_ProcessHumanIntestineA8 6.0e-14
PCBD1GOBP_Alcohol_Metabolic_ProcessHumanPancreasPDAC-B-st1 2.6e-05
PCBD1GOBP_Polyol_Metabolic_ProcessHumanPancreasPDAC-B-st1 9.8e-06
PCBD1GOBP_Cellular_Amino_Acid_Metabolic_ProcessHumanPancreasPDAC-A-st2 9.6e-05
PCBD1GOBP_Tetrahydrobiopterin_Metabolic_ProcessHumanPancreasPDAC-A-st2 5.1e-05
PCBD1GOBP_Alpha_Amino_Acid_Catabolic_ProcessHumanUterusrep_25 1.2e-11
PCBD1GOBP_Aromatic_Amino_Acid_Family_Catabolic_ProcessHumanUterusrep_25 1.6e-11
PCBD1GOBP_Aromatic_Amino_Acid_Family_Metabolic_ProcessHumanUterusrep_25 1.1e-07
PCBD1GOBP_Pteridine_Containing_Compound_Biosynthetic_ProcessHumanUterusrep_25 3.9e-12
PCBD1GOBP_Alcohol_Biosynthetic_ProcessHumanUterusrep_26 2.6e-06
PCBD1GOBP_Alcohol_Metabolic_ProcessHumanUterusrep_26 1.3e-06
PCBD1GOBP_Alpha_Amino_Acid_Metabolic_ProcessHumanUterusrep_26 1.6e-06
PCBD1GOBP_Cellular_Amino_Acid_Catabolic_ProcessHumanUterusrep_26 3.2e-12
PCBD1GOBP_Organic_Acid_Catabolic_ProcessHumanUterusrep_26 6.9e-09
PCBD1GOBP_Organic_Acid_Metabolic_ProcessHumanUterusrep_26 4.9e-06
PCBD1GOBP_Organic_Cyclic_Compound_Catabolic_ProcessHumanUterusrep_26 2.6e-06
PCBD1GOBP_Organic_Hydroxy_Compound_Biosynthetic_ProcessHumanUterusrep_26 3.2e-10
PCBD1GOBP_Organic_Hydroxy_Compound_Metabolic_ProcessHumanUterusrep_26 2.5e-08
PCBD1GOBP_Organonitrogen_Compound_Catabolic_ProcessHumanUterusrep_26 1.0e-08
PCBD1GOBP_Small_Molecule_Biosynthetic_ProcessHumanUterusrep_26 5.8e-09
PCBD1GOBP_Small_Molecule_Catabolic_ProcessHumanUterusrep_26 9.1e-13
PCBD1GOBP_Aromatic_Amino_Acid_Family_Catabolic_ProcessHumanBreastrep_1 4.5e-36
PCBD1GOBP_L_Phenylalanine_Metabolic_ProcessHumanBreastrep_1 6.5e-22
PCBD1GOBP_Organic_Hydroxy_Compound_Metabolic_ProcessHumanBreastrep_1 7.3e-16
PCBD1GOBP_Regulation_Of_BindingHumanBreastrep_1 6.1e-11
PCBD1GOBP_Regulation_Of_Protein_BindingHumanBreastrep_1 1.6e-99
PCBD1GOBP_Polyol_Biosynthetic_ProcessHumanBreastrep_5 2.7e-07
PCBD1GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_ProcessHumanBreastrep_5 8.0e-09
PCBD1GOBP_Alcohol_Biosynthetic_ProcessHumanBreastrep_6 9.0e-04
PCBD1GOBP_Alcohol_Metabolic_ProcessHumanBreastrep_6 1.3e-04
PCBD1GOBP_Alpha_Amino_Acid_Catabolic_ProcessHumanBreastrep_6 2.6e-05
PCBD1GOBP_Alpha_Amino_Acid_Metabolic_ProcessHumanBreastrep_6 1.7e-08
PCBD1GOBP_Aromatic_Amino_Acid_Family_Metabolic_ProcessHumanBreastrep_6 4.0e-10
PCBD1GOBP_Cellular_Amino_Acid_Catabolic_ProcessHumanBreastrep_6 1.6e-05
PCBD1GOBP_Cellular_Amino_Acid_Metabolic_ProcessHumanBreastrep_6 1.0e-10
PCBD1GOBP_Diol_Biosynthetic_ProcessHumanBreastrep_6 2.9e-05
PCBD1GOBP_Organic_Acid_Catabolic_ProcessHumanBreastrep_6 1.5e-11
PCBD1GOBP_Organic_Acid_Metabolic_ProcessHumanBreastrep_6 6.7e-05
PCBD1GOBP_Organic_Cyclic_Compound_Catabolic_ProcessHumanBreastrep_6 7.7e-08
PCBD1GOBP_Organic_Hydroxy_Compound_Biosynthetic_ProcessHumanBreastrep_6 2.5e-06
PCBD1GOBP_Organonitrogen_Compound_Biosynthetic_ProcessHumanBreastrep_6 1.2e-09
PCBD1GOBP_Organonitrogen_Compound_Catabolic_ProcessHumanBreastrep_6 9.5e-06
PCBD1GOBP_Polyol_Metabolic_ProcessHumanBreastrep_6 2.9e-05
PCBD1GOBP_Pteridine_Containing_Compound_Biosynthetic_ProcessHumanBreastrep_6 1.7e-09
PCBD1GOBP_Pteridine_Containing_Compound_Metabolic_ProcessHumanBreastrep_6 1.9e-06
PCBD1GOBP_Small_Molecule_Biosynthetic_ProcessHumanBreastrep_6 1.0e-06
PCBD1GOBP_Small_Molecule_Catabolic_ProcessHumanBreastrep_6 4.7e-07
PCBD1GOBP_Small_Molecule_Metabolic_ProcessHumanBreastrep_6 5.5e-09
PCBD1GOBP_Tetrahydrobiopterin_Metabolic_ProcessHumanBreastrep_6 1.9e-08
PCBD1GOBP_Tetrahydrobiopterin_Metabolic_ProcessHumanSkinP10_rep1 3.8e-14
PCBD1GOBP_Diol_Biosynthetic_ProcessHumanSkinP10_rep2 3.3e-13
PCBD1GOBP_Diol_Metabolic_ProcessHumanSkinP10_rep2 7.5e-16

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PCBD1 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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PCBD1 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for PCBD1 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for PCBD1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for PCBD1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource
PCBD1C1849700Hyperphenylalaninemia with primapterinuria5CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
PCBD1C0152013Adenocarcinoma of lung (disorder)1CTD_human