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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

Spatial pattern genes

Soverview

Spatial pattern pathway

Soverview

Cell cell interactions using single cell data

Soverview

Cell-cell/spot-spot interactions using spatial data

Soverview

Transcription factors events

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Related drugs with this gene

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Related diseases with this gene

Spatial pattern gene: GPD2 (spascer ID:2820)

Gene summary for GPD2

check button Gene summary
Gene information
SpeciesHuman
Gene symbol

GPD2

Gene ID

2820

Gene nameglycerol-3-phosphate dehydrogenase 2
SynonymsGDH2|GPDM|mGDH|mGPDH
Cytomap2q24.1
Type of geneprotein-coding
Descriptionglycerol-3-phosphate dehydrogenase, mitochondrialGPD-MGPDH-Mglycerol-3-phosphate dehydrogenase 2 (mitochondrial)mitochondrial glycerophosphate dehydrogenasemitohondrial glycerophosphate dehydrogenasemtGPDtesticular tissue protein Li 76
Modification date20220513
UniProtAcc

P43304


check button Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA).
GeneGO IDGO termPubMed IDCategory
GPD2

GO:0005739

mitochondrion

21873635

Component

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Spatial pattern events for GPD2

check buttonspatial pattern gene list.
Gene symbolSpeciesTissueReplicationPMIDAdj p-value
GPD2HumanIntestinerep_colon4 344172252.06e-15
GPD2HumanLiverrep_liver1 344172251.89e-15
GPD2HumanLiverrep_liver2 344172256.98e-16
GPD2HumanIntestineA2 334064092.04e-07
GPD2HumanBreastCID4290 344938724.68e-15

check buttonspatial pattern gene map.(click to enlarge the image in a new window)

H&E staining (if available)Singel gene map
Intestine_rep_colon4_H&E
boxplot

boxplot
Liver_rep_liver1_H&E
boxplot

boxplot
Liver_rep_liver2_H&E
boxplot

boxplot
Intestine_A2_H&E
boxplot

boxplot
Breast_CID4290_H&E
boxplot

boxplot


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Spatial pattern pathway has GPD2 envolved


SymbolPathwaySpeciesTissue typeReplicationP-value
GPD2GOBP_Cellular_RespirationHumanBladderrep_4 2.0e-15
GPD2GOBP_Electron_Transport_ChainHumanBladderrep_4 1.0e-20
GPD2GOBP_Energy_Derivation_By_Oxidation_Of_Organic_CompoundsHumanBladderrep_4 1.5e-12
GPD2GOBP_Generation_Of_Precursor_Metabolites_And_EnergyHumanBladderrep_4 3.4e-12
GPD2GOBP_Respiratory_Electron_Transport_ChainHumanBladderrep_4 4.7e-21
GPD2GOBP_Carbohydrate_Derivative_Metabolic_ProcessHumanIntestineA3 3.3e-11
GPD2GOBP_Carbohydrate_Metabolic_ProcessHumanIntestineA3 4.1e-08
GPD2GOBP_Cellular_Carbohydrate_Metabolic_ProcessHumanIntestineA3 3.9e-07
GPD2GOBP_Cellular_RespirationHumanIntestineA3 6.2e-15
GPD2GOBP_Electron_Transport_ChainHumanIntestineA3 1.4e-19
GPD2GOBP_Energy_Derivation_By_Oxidation_Of_Organic_CompoundsHumanIntestineA3 2.5e-12
GPD2GOBP_Generation_Of_Precursor_Metabolites_And_EnergyHumanIntestineA3 4.3e-14
GPD2GOBP_Organophosphate_Metabolic_ProcessHumanIntestineA3 4.4e-13
GPD2GOBP_Respiratory_Electron_Transport_ChainHumanIntestineA3 7.5e-17
GPD2GOBP_Alcohol_Catabolic_ProcessHumanIntestineA8 2.4e-10
GPD2GOBP_Alditol_Catabolic_ProcessHumanIntestineA8 1.1e-10
GPD2GOBP_Alditol_Metabolic_ProcessHumanIntestineA8 3.6e-15
GPD2GOBP_Alditol_Phosphate_Metabolic_ProcessHumanIntestineA8 3.9e-21
GPD2GOBP_Carbohydrate_Catabolic_ProcessHumanIntestineA8 2.0e-14
GPD2GOBP_Cellular_Carbohydrate_Catabolic_ProcessHumanIntestineA8 2.1e-16
GPD2GOBP_Cellular_Ketone_Metabolic_ProcessHumanIntestineA8 1.2e-11
GPD2GOBP_Glycerol_3_Phosphate_Metabolic_ProcessHumanIntestineA8 5.6e-13
GPD2GOBP_Nad_Metabolic_ProcessHumanIntestineA8 3.9e-11
GPD2GOBP_Nadh_Metabolic_ProcessHumanIntestineA8 4.4e-14
GPD2GOBP_Organic_Hydroxy_Compound_Catabolic_ProcessHumanIntestineA8 1.3e-13
GPD2GOBP_Organic_Hydroxy_Compound_Metabolic_ProcessHumanIntestineA8 6.4e-10
GPD2GOBP_Polyol_Catabolic_ProcessHumanIntestineA8 4.0e-22
GPD2GOBP_Polyol_Metabolic_ProcessHumanIntestineA8 6.2e-14
GPD2GOBP_Small_Molecule_Catabolic_ProcessHumanIntestineA8 2.2e-13
GPD2GOBP_Small_Molecule_Metabolic_ProcessHumanIntestineA8 2.1e-15
GPD2GOBP_Alcohol_Metabolic_ProcessHumanPancreasPDAC-B-st1 2.6e-05
GPD2GOBP_Nadh_Metabolic_ProcessHumanPancreasPDAC-B-st1 2.6e-05
GPD2GOBP_Polyol_Metabolic_ProcessHumanPancreasPDAC-B-st1 9.8e-06
GPD2GOBP_Alditol_Phosphate_Metabolic_ProcessHumanUterusrep_25 4.8e-06
GPD2GOBP_Nad_Metabolic_ProcessHumanUterusrep_25 7.2e-08
GPD2GOBP_Nadh_OxidationHumanUterusrep_25 1.1e-08
GPD2GOBP_Alcohol_Metabolic_ProcessHumanUterusrep_26 1.3e-06
GPD2GOBP_Alditol_Metabolic_ProcessHumanUterusrep_26 6.9e-09
GPD2GOBP_Cellular_Carbohydrate_Catabolic_ProcessHumanUterusrep_26 5.7e-08
GPD2GOBP_Cellular_Carbohydrate_Metabolic_ProcessHumanUterusrep_26 2.2e-06
GPD2GOBP_Cellular_Ketone_Metabolic_ProcessHumanUterusrep_26 3.2e-13
GPD2GOBP_Cellular_RespirationHumanUterusrep_26 3.7e-07
GPD2GOBP_Electron_Transport_ChainHumanUterusrep_26 1.9e-08
GPD2GOBP_Energy_Derivation_By_Oxidation_Of_Organic_CompoundsHumanUterusrep_26 7.2e-06
GPD2GOBP_Generation_Of_Precursor_Metabolites_And_EnergyHumanUterusrep_26 1.8e-06
GPD2GOBP_Glycerol_3_Phosphate_Metabolic_ProcessHumanUterusrep_26 3.0e-08
GPD2GOBP_Nadh_Metabolic_ProcessHumanUterusrep_26 5.2e-06
GPD2GOBP_Organic_Hydroxy_Compound_Metabolic_ProcessHumanUterusrep_26 2.5e-08
GPD2GOBP_Polyol_Catabolic_ProcessHumanUterusrep_26 4.3e-11
GPD2GOBP_Primary_Alcohol_Metabolic_ProcessHumanUterusrep_26 2.6e-10
GPD2GOBP_Respiratory_Electron_Transport_ChainHumanUterusrep_26 2.1e-08
GPD2GOBP_Small_Molecule_Catabolic_ProcessHumanUterusrep_26 9.1e-13
GPD2GOBP_Cellular_Ketone_Metabolic_ProcessHumanBreastrep_1 6.1e-19
GPD2GOBP_Nadh_OxidationHumanBreastrep_1 5.5e-04
GPD2GOBP_Organic_Hydroxy_Compound_Metabolic_ProcessHumanBreastrep_1 7.3e-16
GPD2GOBP_Polyol_Catabolic_ProcessHumanBreastrep_1 5.1e-04
GPD2GOBP_Alditol_Phosphate_Metabolic_ProcessHumanBreastrep_5 2.2e-27
GPD2GOBP_Carbohydrate_Metabolic_ProcessHumanBreastrep_5 3.5e-10
GPD2GOBP_Cellular_Carbohydrate_Metabolic_ProcessHumanBreastrep_5 9.4e-08
GPD2GOBP_Electron_Transport_ChainHumanBreastrep_5 6.2e-04
GPD2GOBP_Glycerol_3_Phosphate_Metabolic_ProcessHumanBreastrep_5 2.6e-04
GPD2GOBP_Respiratory_Electron_Transport_ChainHumanBreastrep_5 3.1e-04
GPD2GOBP_Alcohol_Metabolic_ProcessHumanBreastrep_6 1.3e-04
GPD2GOBP_Alditol_Catabolic_ProcessHumanBreastrep_6 8.7e-06
GPD2GOBP_Alditol_Metabolic_ProcessHumanBreastrep_6 1.7e-09
GPD2GOBP_Carbohydrate_Derivative_Metabolic_ProcessHumanBreastrep_6 6.1e-07
GPD2GOBP_Cellular_Carbohydrate_Catabolic_ProcessHumanBreastrep_6 1.0e-15
GPD2GOBP_Cellular_RespirationHumanBreastrep_6 2.2e-06
GPD2GOBP_Energy_Derivation_By_Oxidation_Of_Organic_CompoundsHumanBreastrep_6 5.2e-08
GPD2GOBP_Generation_Of_Precursor_Metabolites_And_EnergyHumanBreastrep_6 7.1e-09
GPD2GOBP_Nad_Metabolic_ProcessHumanBreastrep_6 1.6e-14
GPD2GOBP_Nadh_Metabolic_ProcessHumanBreastrep_6 3.2e-09
GPD2GOBP_Organophosphate_Metabolic_ProcessHumanBreastrep_6 1.0e-12
GPD2GOBP_Polyol_Metabolic_ProcessHumanBreastrep_6 2.9e-05
GPD2GOBP_Primary_Alcohol_Metabolic_ProcessHumanBreastrep_6 2.0e-08
GPD2GOBP_Small_Molecule_Catabolic_ProcessHumanBreastrep_6 4.7e-07
GPD2GOBP_Small_Molecule_Metabolic_ProcessHumanBreastrep_6 5.5e-09
GPD2GOBP_Primary_Alcohol_Metabolic_ProcessHumanSkinP2_rep3 4.9e-08
GPD2GOBP_Cellular_Carbohydrate_Catabolic_ProcessHumanSkinP10_rep1 8.0e-08
GPD2GOBP_Nad_Metabolic_ProcessHumanSkinP10_rep1 4.9e-08
GPD2GOBP_Alditol_Catabolic_ProcessHumanSkinP10_rep2 7.2e-08
GPD2GOBP_Alditol_Metabolic_ProcessHumanSkinP10_rep2 1.3e-15
GPD2GOBP_Alditol_Phosphate_Metabolic_ProcessHumanSkinP10_rep2 1.5e-19
GPD2GOBP_Nadh_Metabolic_ProcessHumanSkinP10_rep2 1.6e-08
GPD2GOBP_Cellular_Ketone_Metabolic_ProcessHumanLungrep_2 2.1e-09

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GPD2 function as liang/receptor in single cell data

TissueSourceSourceCellTargetTargetCellPMIDGroup

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GPD2 function as liang/receptor across spatial transcriptomics tissue

check button Interactions using deconvoluted spatial data.

LigandReceptor LR pairTissueReplication

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Transcription factor for GPD2 envolved

check buttonTranscription factor analysis using single cell data.
TFTissueGroupCell typesTarget genesRss score

check button Motif information.

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Related Drugs for GPD2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.9 2022-01-04)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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Related Diseases for GPD2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease namePubmedsSource
GPD2C0001787Osteoporosis, Age-Related1CTD_human
GPD2C0002152Alloxan Diabetes1CTD_human
GPD2C0011853Diabetes Mellitus, Experimental1CTD_human
GPD2C0011860Diabetes Mellitus, Non-Insulin-Dependent1CTD_human
GPD2C0029456Osteoporosis1CTD_human
GPD2C0029459Osteoporosis, Senile1CTD_human
GPD2C0038433Streptozotocin Diabetes1CTD_human
GPD2C0268583Methylmalonic acidemia1CTD_human
GPD2C0751406Post-Traumatic Osteoporosis1CTD_human
GPD2C1855119Methylmalonic aciduria1CTD_human