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Spatial pattern gene: SSBP4 (spascer ID:170463) |
Gene summary for SSBP4 |
 Gene summary |
| Gene information | |
| Species | Human | Gene symbol | SSBP4 | Gene ID | 170463 |
| Gene name | single stranded DNA binding protein 4 |
| Synonyms | - |
| Cytomap | 19p13.11 |
| Type of gene | protein-coding |
| Description | single-stranded DNA-binding protein 4 |
| Modification date | 20220513 |
| UniProtAcc | Q9BWG4 |
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
| SSBP4 | GO:0005634 | nucleus | 21873635 | Component |
| SSBP4 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 21873635 | Process |
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Spatial pattern events for SSBP4 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| SSBP4 | Human | Brain | rep_2 | 33558695 | 3.04e-07 |
| SSBP4 | Human | Brain | rep_9 | 33558695 | 8.12e-12 |
| SSBP4 | Human | Bladder | rep_1 | 34385456 | 1.88e-10 |
| SSBP4 | Human | Intestine | rep_colon1 | 34417225 | 1.95e-15 |
| SSBP4 | Human | Intestine | rep_colon2 | 34417225 | 8.12e-16 |
| SSBP4 | Human | Intestine | rep_colon3 | 34417225 | 1.22e-06 |
| SSBP4 | Human | Intestine | rep_colon4 | 34417225 | 1.14e-15 |
| SSBP4 | Human | Liver | rep_liver1 | 34417225 | 1.08e-15 |
| SSBP4 | Human | Liver | rep_liver2 | 34417225 | 6.98e-16 |
| SSBP4 | Human | Liver | rep_liver4 | 34417225 | 1.39e-15 |
| SSBP4 | Human | Intestine | A1 | 33406409 | 7.93e-14 |
| SSBP4 | Human | Intestine | A2 | 33406409 | 3.85e-15 |
| SSBP4 | Human | Intestine | A4 | 33406409 | 8.33e-07 |
| SSBP4 | Human | Uterus | rep_1 | 34857954 | 2.89e-12 |
| SSBP4 | Human | Uterus | rep_2 | 34857954 | 2.55e-15 |
| SSBP4 | Human | Uterus | rep_3 | 34857954 | 1.66e-15 |
| SSBP4 | Human | Breast | 1160920F | 34493872 | 1.48e-15 |
| SSBP4 | Human | Breast | CID4290 | 34493872 | 4.37e-07 |
| SSBP4 | Human | Skin | P2_rep2 | 32946785 | 3.01e-11 |
| SSBP4 | Human | Skin | P2_rep3 | 32946785 | 4.33e-08 |
| SSBP4 | Human | Lung | rep_1 | 35355018 | 4.99e-15 |
| SSBP4 | Human | Lung | rep_2 | 35355018 | 1.83e-14 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Brain_rep_2_H&E  |  |
Brain_rep_9_H&E  |  |
Bladder_rep_1_H&E  |  |
Intestine_rep_colon1_H&E  |  |
Intestine_rep_colon2_H&E  |  |
Intestine_rep_colon3_H&E  |  |
Intestine_rep_colon4_H&E  |  |
Liver_rep_liver1_H&E  |  |
Liver_rep_liver2_H&E  |  |
Liver_rep_liver4_H&E  |  |
Intestine_A1_H&E  |  |
Intestine_A2_H&E  |  |
Intestine_A4_H&E  |  |
Uterus_rep_1_H&E  |  |
Uterus_rep_2_H&E  |  |
Uterus_rep_3_H&E  |  |
Breast_1160920F_H&E  |  |
Breast_CID4290_H&E  |  |
Skin_P2_rep3_H&E  |  |
Lung_rep_1_H&E  |  |
Lung_rep_2_H&E  |  |
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Spatial pattern pathway has SSBP4 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| SSBP4 | GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process | Human | Intestine | A3 | 5.1e-13 |
| SSBP4 | GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii | Human | Intestine | A3 | 9.4e-13 |
| SSBP4 | GOBP_Positive_Regulation_Of_Nucleobase_Containing_Compound_Metabolic_Process | Human | Breast | rep_5 | 8.0e-09 |
| SSBP4 | GOBP_Positive_Regulation_Of_Transcription_By_Rna_Polymerase_Ii | Human | Breast | rep_6 | 4.2e-06 |
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SSBP4 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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SSBP4 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for SSBP4 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for SSBP4 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SSBP4 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
