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Spatial pattern gene: SNHG29 (spascer ID:125144) |
Gene summary for SNHG29 |
 Gene summary |
| Gene information | |
| Species | Human | Gene symbol | SNHG29 | Gene ID | 125144 |
| Gene name | small nucleolar RNA host gene 29 |
| Synonyms | C17orf45|C17orf76-AS1|FAM211A-AS1|LRRC75A-AS1|NCRNA00188|TSAP19 |
| Cytomap | 17p11.2 |
| Type of gene | ncRNA |
| Description | C17orf76 antisense RNA 1 (non-protein coding)FAM211A antisense RNA 1LRRC75A antisense RNA 1 |
| Modification date | 20220513 |
| UniProtAcc |
|
| Gene ontology with evidence Inferred from Direct Assay (IDA) and Biological aspect of Ancestor (IBA). |
| Gene | GO ID | GO term | PubMed ID | Category |
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Spatial pattern events for SNHG29 |
| spatial pattern gene list. |
| Gene symbol | Species | Tissue | Replication | PMID | Adj p-value |
| SNHG29 | Human | Intestine | rep_colon1 | 34417225 | 1.95e-15 |
| SNHG29 | Human | Intestine | rep_colon2 | 34417225 | 8.12e-16 |
| SNHG29 | Human | Intestine | rep_colon3 | 34417225 | 1.01e-15 |
| SNHG29 | Human | Intestine | rep_colon4 | 34417225 | 1.14e-15 |
| SNHG29 | Human | Liver | rep_liver1 | 34417225 | 3.57e-15 |
| SNHG29 | Human | Liver | rep_liver2 | 34417225 | 1.27e-15 |
| SNHG29 | Human | Liver | rep_liver3 | 34417225 | 3.51e-15 |
| SNHG29 | Human | Liver | rep_liver4 | 34417225 | 7.71e-16 |
| SNHG29 | Human | Breast | 1142243F | 34493872 | 2.30e-15 |
| SNHG29 | Human | Breast | 1160920F | 34493872 | 1.48e-15 |
| SNHG29 | Human | Heart | w6_s6 | 31835037 | 6.56e-04 |
| SNHG29 | Human | Lung | rep_1 | 35355018 | 7.55e-15 |
| spatial pattern gene map.(click to enlarge the image in a new window) |
| H&E staining (if available) | Singel gene map |
Intestine_rep_colon1_H&E  |  |
Intestine_rep_colon2_H&E  |  |
Intestine_rep_colon3_H&E  |  |
Intestine_rep_colon4_H&E  |  |
Liver_rep_liver1_H&E  |  |
Liver_rep_liver2_H&E  |  |
Liver_rep_liver3_H&E  |  |
Liver_rep_liver4_H&E  |  |
Breast_1142243F_H&E  |  |
Breast_1160920F_H&E  |  |
Lung_rep_1_H&E  |  |
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Spatial pattern pathway has SNHG29 envolved |
| Symbol | Pathway | Species | Tissue type | Replication | P-value |
| SNHG29 | GOBP_Rna_Processing | Human | Intestine | A3 | 3.9e-09 |
| SNHG29 | GOBP_Rna_Processing | Human | Breast | rep_6 | 3.5e-06 |
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SNHG29 function as liang/receptor in single cell data |
| Tissue | Source | SourceCell | Target | TargetCell | PMID | Group |
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SNHG29 function as liang/receptor across spatial transcriptomics tissue |
| Interactions using deconvoluted spatial data. |
| Ligand | Receptor | LR pair | Tissue | Replication |
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Transcription factor for SNHG29 envolved |
| Transcription factor analysis using single cell data. |
| TF | Tissue | Group | Cell types | Target genes | Rss score |
| Motif information. |
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Related Drugs for SNHG29 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.9 2022-01-04) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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Related Diseases for SNHG29 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | Pubmeds | Source |
