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Fusion gene ID: 9860 |
FusionGeneSummary for DHCR24_PCNXL2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: DHCR24_PCNXL2 | Fusion gene ID: 9860 | Hgene | Tgene | Gene symbol | DHCR24 | PCNXL2 | Gene ID | 1718 | 80003 |
Gene name | 24-dehydrocholesterol reductase | pecanex homolog 2 | |
Synonyms | DCE|Nbla03646|SELADIN1|seladin-1 | PCNXL2 | |
Cytomap | 1p32.3 | 1q42.2 | |
Type of gene | protein-coding | protein-coding | |
Description | delta(24)-sterol reductase3 beta-hydroxysterol delta 24-reductasedesmosterol-to-cholesterol enzymediminuto/dwarf1 homologseladin 1selective AD indicator 1 | pecanex-like protein 2 | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q15392 | ||
Ensembl transtripts involved in fusion gene | ENST00000371269, ENST00000537443, ENST00000535035, | ENST00000258229, ENST00000344698, ENST00000488780, ENST00000520463, ENST00000430153, | |
Fusion gene scores | * DoF score | 17 X 10 X 7=1190 | 4 X 3 X 3=36 |
# samples | 24 | 4 | |
** MAII score | log2(24/1190*10)=-2.30985526258679 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: DHCR24 [Title/Abstract] AND PCNXL2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | DHCR24 | GO:0043066 | negative regulation of apoptotic process | 15688385 |
Hgene | DHCR24 | GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | 11007892 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | HNSC | TCGA-CV-7253-01A | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000371269 | ENST00000258229 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000371269 | ENST00000344698 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000371269 | ENST00000488780 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000371269 | ENST00000520463 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000371269 | ENST00000430153 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
Frame-shift | ENST00000537443 | ENST00000258229 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000537443 | ENST00000344698 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000537443 | ENST00000488780 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000537443 | ENST00000520463 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000537443 | ENST00000430153 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
In-frame | ENST00000535035 | ENST00000258229 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000535035 | ENST00000344698 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000535035 | ENST00000488780 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000535035 | ENST00000520463 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
5CDS-intron | ENST00000535035 | ENST00000430153 | DHCR24 | chr1 | 55319710 | - | PCNXL2 | chr1 | 233314921 | - |
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FusionProtFeatures for DHCR24_PCNXL2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DHCR24 | PCNXL2 |
Catalyzes the reduction of the Delta-24 double bond ofsterol intermediates. Protects cells from oxidative stress byreducing caspase 3 activity during apoptosis induced by oxidativestress. Also protects against amyloid-beta peptide-inducedapoptosis. {ECO:0000269|PubMed:11007892,ECO:0000269|PubMed:11519011, ECO:0000269|PubMed:22010141}. | Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | DHCR24 | chr1:55319710 | chr1:233314921 | ENST00000371269 | - | 7 | 9 | 58_234 | 406 | 517 | Domain | FAD-binding PCMH-type |
Hgene | DHCR24 | chr1:55319710 | chr1:233314921 | ENST00000371269 | - | 7 | 9 | 163_175 | 406 | 517 | Nucleotide binding | FAD |
Hgene | DHCR24 | chr1:55319710 | chr1:233314921 | ENST00000371269 | - | 7 | 9 | 23_31 | 406 | 517 | Topological domain | Lumenal |
Hgene | DHCR24 | chr1:55319710 | chr1:233314921 | ENST00000371269 | - | 7 | 9 | 32_52 | 406 | 517 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1937_2063 | 1022 | 2138 | Compositional bias | Note=Ser-rich |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1937_2063 | -399 | 778 | Compositional bias | Note=Ser-rich |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1937_2063 | -780 | 287 | Compositional bias | Note=Ser-rich |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1029_1049 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1099_1119 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1124_1144 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1193_1213 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1237_1257 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1265_1285 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1302_1322 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 1324_1344 | 1022 | 2138 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1029_1049 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1099_1119 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1124_1144 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1193_1213 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1237_1257 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1265_1285 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1302_1322 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 1324_1344 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 34_54 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 57_77 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 844_864 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 868_888 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 901_921 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 952_972 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000344698 | - | 0 | 10 | 983_1003 | -399 | 778 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1029_1049 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1099_1119 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1124_1144 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1193_1213 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1237_1257 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1265_1285 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1302_1322 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 1324_1344 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 34_54 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 57_77 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 844_864 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 868_888 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 901_921 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 952_972 | -780 | 287 | Transmembrane | Helical |
Tgene | >PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000430153 | - | 0 | 14 | 983_1003 | -780 | 287 | Transmembrane | Helical |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >DHCR24 | chr1:55319710 | chr1:233314921 | ENST00000371269 | - | 7 | 9 | 53_516 | 406 | 517 | Topological domain | Cytoplasmic |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 34_54 | 1022 | 2138 | Transmembrane | Helical |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 57_77 | 1022 | 2138 | Transmembrane | Helical |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 844_864 | 1022 | 2138 | Transmembrane | Helical |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 868_888 | 1022 | 2138 | Transmembrane | Helical |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 901_921 | 1022 | 2138 | Transmembrane | Helical |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 952_972 | 1022 | 2138 | Transmembrane | Helical |
Tgene | PCNXL2 | chr1:55319710 | chr1:233314921 | ENST00000258229 | - | 14 | 34 | 983_1003 | 1022 | 2138 | Transmembrane | Helical |
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FusionGeneSequence for DHCR24_PCNXL2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_DHCR24_ENST00000371269_chr1_55319710_-_PCNXL2_ENST00000258229_chr1_233314921_-_1522aa MEPAVSLAVCALLFLLWVRLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKTFM CTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKY GLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKLRFEPVRGLEAICAKFTHESQRQENHFVEGL LYSLDEAVIMTGVMTDEAEPSKLNSIGNYYKPWFFKHVENYLKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVP PKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTFQNDIHEPWSMQHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRL FPKFLHQNLAESAADPLPKKMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTHYVLPQLRKHHPWMWI SHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALILNALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFI NLSFTVIFFHFDYKDISESFLLDFFMVSILFSKLGDLLHKLQFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAMLFFQTIATSIFSTPLSP FLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERDPGNDDNNLNSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDL NAFVHLIEIGNGLVTFQLRGLEFRGTYCQQREVEAIMEGDEEDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEITQTQYILEGYSILDNNA ATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLLKSLQPFAKWHYIERDLAMFNINIDDDYVPCLQGITRASFCNVYLEWIQH CARKRQEPSTTLDSDEDSPLVTLSFALCTLGRRALGTAAHNMAISLDSFLYGLHVLFKGDFRITARDEWVFADMDLLHKVVAPAIRMSLK LHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRGAVLSNKEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLW AGQQQELIFLRNRNPERGSIQNNKQVLRNLINSSCDQPLGYPMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRTWFWTKWVRMRKDCNAR QHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQHGVSSCEGTQRTGRRKGRSQSVQAHSALSQRPPMLSSSGPILESRQTF LQTSTSVHELAQRLSGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSFLFGKRSFSSALVISGLSAAEGGNTS >In-frame_DHCR24_ENST00000535035_chr1_55319710_-_PCNXL2_ENST00000258229_chr1_233314921_-_1481aa MGAGEQNRQSAHCVQGICGYLEGDEEGEEGEVRSTQVREWKEQGSKTFMCTGRPGWLTVSLRVGKYKKTHKNIMINLMDILEVDTKKQIV RVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCTPSENSDLFYAVPWSCGTL GFLVAAEIRIIPAKKYVKLRFEPVRGLEAICAKFTHESQRQENHFVEGLLYSLDEAVIMTGVMTDEAEPSKLNSIGNYYKPWFFKHVENY LKTNREGLEYIPLRHYYHRHTRSIFWELQDIIPFGNNPIFRYLFGWMVPPKISLLKLTQGETLRKLYEQHHVVQDMLVPMKCLQQALHTF QNDIHEPWSMQHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAADPLPKKMKDSVTDVLKWDLIVCAVVAV LSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTHYVLPQLRKHHPWMWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYP ALILNALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDYKDISESFLLDFFMVSILFSKLGDLLHKL QFVLTYVAPWQMAWGSSFHVFAQLFAIPHSAMLFFQTIATSIFSTPLSPFLGSVIFITSYVRPVKFWEKNYNTRRVDNSNTRLAVQIERD PGNDDNNLNSIFYEHLTRTLQESLCGDLVLGRWGNYSSGDCFILASDDLNAFVHLIEIGNGLVTFQLRGLEFRGTYCQQREVEAIMEGDE EDRGCCCCKPGHLPHLLSCNAAFHLRWLTWEITQTQYILEGYSILDNNAATMLQVFDLRRILIRYYIKSIIYYMVTSPKLLSWIKNESLL KSLQPFAKWHYIERDLAMFNINIDDDYVPCLQGITRASFCNVYLEWIQHCARKRQEPSTTLDSDEDSPLVTLSFALCTLGRRALGTAAHN MAISLDSFLYGLHVLFKGDFRITARDEWVFADMDLLHKVVAPAIRMSLKLHQDQFTCPDEYEDPAVLYEAIQSFEKKVVICHEGDPAWRG AVLSNKEELLTLRHVVDEGADEYKVIMLHRSFLSFKVIKVNKECVRGLWAGQQQELIFLRNRNPERGSIQNNKQVLRNLINSSCDQPLGY PMYVSPLTTSYLGTHRQLKNIWGGPITLDRIRTWFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGA QHGVSSCEGTQRTGRRKGRSQSVQAHSALSQRPPMLSSSGPILESRQTFLQTSTSVHELAQRLSGSRLSLHASATSLHSQPPPVTTTGHL SVRERAEALIRSSLGSSTSSTLSFLFGKRSFSSALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAASQATRHLSEPCEPPDATEQGQL |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_DHCR24_ENST00000371269_chr1_55319710_-_PCNXL2_ENST00000258229_chr1_233314921_-_4566nt ATGGAGCCCGCCGTGTCGCTGGCCGTGTGCGCGCTGCTCTTCCTGCTGTGGGTGCGCCTGAAGGGGCTGGAGTTCGTGCTCATCCACCAG CGCTGGGTGTTCGTGTGCCTCTTCCTCCTGCCGCTCTCGCTTATCTTCGATATCTACTACTACGTGCGCGCCTGGGTGGTGTTCAAGCTC AGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTTCATG TGCACGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTGTCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAACCTGATGGAC ATTCTGGAAGTGGACACCAAGAAACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGC TGGACTCTCCCCGTGTTGCCTGAGCTTGATGACCTCACAGTGGGGGGCTTGATCATGGGCACAGGCATCGAGTCATCATCCCACAAGTAC GGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCCTGGCTGATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACTCAGACCTG TTCTATGCCGTACCCTGGTCCTGTGGGACGCTGGGTTTCCTGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTG CGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCTG CTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGGCAATTACTAC AAGCCGTGGTTCTTTAAGCATGTGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGC CACACGCGCAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTTGGCTGGATGGTGCCT CCCAAGATCTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCC ATGAAGTGCCTGCAGCAGGCCCTGCACACCTTCCAAAACGACATCCACGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCC TTCTGTGGCCTCTTGGTCGCCCTTTCTTACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCCTTCATCCAATGCAGGCTG TTTCCTAAATTTTTACATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTCAGTGACGGATGTCTTAAAA TGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTATTCCTGTCATTGCGACCATTTCTCAGC ATCGTGCTGTTTGCCTTGGCTGGAGCCGTGGGGTTTGTAACACATTACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGATGTGGATT TCACACCCCATTCTCAAAAACAAAGAGTATCATCAACGGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGG CTTCAGTGTTTTGAAAAATACATCTTGTACCCAGCGCTAATTTTGAATGCCCTCACTATTGATGCATTTTTAATAAGCAATCACCGGAGA CTTGGTACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTTACCAGTTTATT AACTTGAGCTTCACTGTCATCTTTTTCCACTTTGACTACAAAGATATTTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTA TTTAGCAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCAC GTGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCATGCTTTTCTTTCAGACGATTGCCACATCAATCTTTTCTACCCCATTGAGCCCA TTTCTTGGGAGTGTCATTTTCATCACATCATATGTCAGGCCAGTGAAATTCTGGGAGAAAAACTACAATACAAGGCGAGTGGATAATTCC AACACAAGACTGGCAGTCCAAATTGAAAGAGATCCAGGGAATGATGACAACAATCTCAATTCCATTTTTTATGAACACTTGACAAGGACC CTCCAGGAGTCCCTCTGTGGAGACTTAGTTCTTGGACGTTGGGGCAACTACAGCTCTGGCGATTGCTTTATTTTGGCTTCAGATGACCTC AATGCCTTTGTTCACCTGATTGAAATTGGAAATGGTCTTGTCACCTTTCAACTTCGAGGACTGGAATTCCGAGGAACCTACTGCCAGCAG AGGGAGGTAGAAGCCATCATGGAGGGCGACGAGGAGGACAGAGGCTGCTGCTGCTGCAAACCAGGCCACTTGCCTCACCTGCTGTCCTGC AACGCTGCCTTTCACCTCCGCTGGCTCACCTGGGAAATCACGCAGACCCAGTACATCCTGGAGGGCTACAGCATCCTGGACAACAACGCG GCCACCATGCTGCAGGTGTTTGACCTCCGAAGGATCCTCATCCGCTACTACATCAAGAGTATAATATACTATATGGTAACGTCTCCCAAA CTCCTCTCCTGGATCAAAAATGAATCACTTCTGAAGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTC AACATTAACATTGATGATGACTACGTCCCGTGTCTCCAGGGGATCACACGAGCTAGCTTCTGCAATGTTTATCTAGAATGGATTCAACAC TGTGCACGGAAAAGACAAGAGCCTTCAACGACCCTGGACAGTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTG GGGAGGAGAGCTCTGGGAACAGCCGCTCACAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGGTGAC TTCAGAATAACAGCACGTGACGAGTGGGTATTTGCTGACATGGACCTACTGCATAAAGTTGTAGCTCCAGCTATCAGGATGTCCCTGAAA CTTCACCAGGACCAGTTCACTTGCCCTGACGAGTATGAAGACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAGAAGGTGGTC ATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGT GCCGACGAGTACAAGGTCATCATGCTCCACAGAAGCTTCCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGG GCCGGGCAGCAGCAGGAGCTTATATTTCTTCGCAACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTTG ATTAACTCCTCCTGCGATCAGCCCCTGGGGTACCCCATGTATGTCTCCCCACTAACCACATCCTACCTAGGGACACACAGGCAGCTGAAG AACATCTGGGGTGGACCCATCACTTTGGACAGAATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAAGGATTGCAATGCCCGC CAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGGCAGCCAGGAG AGCAGCGCAGAACAGCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATCCTGTGAAGGGACACAGAGAACAGGCAGGAGGAAAGGCAGG AGCCAGTCCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTC CTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCT CAGCCCCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGC TCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGAGGGGGGCAATACCAGT GACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGCACCTCTCCGAGCCATGT GAGCCCCCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGA >In-frame_DHCR24_ENST00000535035_chr1_55319710_-_PCNXL2_ENST00000258229_chr1_233314921_-_4443nt ATGGGGGCGGGGGAACAGAACAGGCAAAGTGCCCACTGTGTGCAGGGCATATGCGGGTACCTGGAGGGAGATGAAGAAGGGGAAGAGGGG GAGGTGCGAAGCACTCAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCCCTGGCTGGCTCACTGTCTCA CTACGTGTCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAACCTGATGGACATTCTGGAAGTGGACACCAAGAAACAGATTGTC CGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTTGCCTGAGCTTGATGAC CTCACAGTGGGGGGCTTGATCATGGGCACAGGCATCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAG CTGGTCCTGGCTGATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCCGTACCCTGGTCCTGTGGGACGCTG GGTTTCCTGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATC TGTGCCAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACA GGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGGCAATTACTACAAGCCGTGGTTCTTTAAGCATGTGGAGAACTAT CTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCCAGGAC ATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAGCTGACCCAGGGT GAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTTC CAAAACGACATCCACGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCCTTCTGTGGCCTCTTGGTCGCCCTTTCTTACCAT CTGAGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCTAAATTTTTACATCAAAATCTGGCAGAG TCAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGGTTGCTGTC CTCTCATTTGCAGTCAGCGCCAGCACTGTATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGCCGTGGGG TTTGTAACACATTACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGATGTGGATTTCACACCCCATTCTCAAAAACAAAGAGTATCAT CAACGGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGGCTTCAGTGTTTTGAAAAATACATCTTGTACCCA GCGCTAATTTTGAATGCCCTCACTATTGATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTCTGATGATC ATTGCTGGCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTTACCAGTTTATTAACTTGAGCTTCACTGTCATCTTTTTCCACTTT GACTACAAAGATATTTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGCTCGGGGACCTGCTTCACAAGTTA CAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCTCATTCT GCCATGCTTTTCTTTCAGACGATTGCCACATCAATCTTTTCTACCCCATTGAGCCCATTTCTTGGGAGTGTCATTTTCATCACATCATAT GTCAGGCCAGTGAAATTCTGGGAGAAAAACTACAATACAAGGCGAGTGGATAATTCCAACACAAGACTGGCAGTCCAAATTGAAAGAGAT CCAGGGAATGATGACAACAATCTCAATTCCATTTTTTATGAACACTTGACAAGGACCCTCCAGGAGTCCCTCTGTGGAGACTTAGTTCTT GGACGTTGGGGCAACTACAGCTCTGGCGATTGCTTTATTTTGGCTTCAGATGACCTCAATGCCTTTGTTCACCTGATTGAAATTGGAAAT GGTCTTGTCACCTTTCAACTTCGAGGACTGGAATTCCGAGGAACCTACTGCCAGCAGAGGGAGGTAGAAGCCATCATGGAGGGCGACGAG GAGGACAGAGGCTGCTGCTGCTGCAAACCAGGCCACTTGCCTCACCTGCTGTCCTGCAACGCTGCCTTTCACCTCCGCTGGCTCACCTGG GAAATCACGCAGACCCAGTACATCCTGGAGGGCTACAGCATCCTGGACAACAACGCGGCCACCATGCTGCAGGTGTTTGACCTCCGAAGG ATCCTCATCCGCTACTACATCAAGAGTATAATATACTATATGGTAACGTCTCCCAAACTCCTCTCCTGGATCAAAAATGAATCACTTCTG AAGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTCAACATTAACATTGATGATGACTACGTCCCGTGT CTCCAGGGGATCACACGAGCTAGCTTCTGCAATGTTTATCTAGAATGGATTCAACACTGTGCACGGAAAAGACAAGAGCCTTCAACGACC CTGGACAGTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCTCTGGGAACAGCCGCTCACAAT ATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGGTGACTTCAGAATAACAGCACGTGACGAGTGGGTATTT GCTGACATGGACCTACTGCATAAAGTTGTAGCTCCAGCTATCAGGATGTCCCTGAAACTTCACCAGGACCAGTTCACTTGCCCTGACGAG TATGAAGACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAGAAGGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGC GCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCACAGA AGCTTCCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCCGGGCAGCAGCAGGAGCTTATATTTCTTCGC AACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTTGATTAACTCCTCCTGCGATCAGCCCCTGGGGTAC CCCATGTATGTCTCCCCACTAACCACATCCTACCTAGGGACACACAGGCAGCTGAAGAACATCTGGGGTGGACCCATCACTTTGGACAGA ATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGAC GGAGGAGGGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCGCAGAACAGCCCAGAAAAGGCGGTGCT CAGCACGGGGTGTCATCCTGTGAAGGGACACAGAGAACAGGCAGGAGGAAAGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCTAAGC CAAAGGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCC CAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACCGGCCACCTG AGTGTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGC TTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGAGGGGGGCAATACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTG ATGGGCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGCTT CATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_DHCR24_ENST00000371269_chr1_55319710_-_PCNXL2_ENST00000258229_chr1_233314921_-_5534nt CCCGGGCTGTGGGCTACAGGCGCAGAGCGGGCCAGGCGCGGAGCTGGCGGCAGTGACAGGAGGCGCGAACCCGCAGCGCTTACCGCGCGG CGCCGCACCATGGAGCCCGCCGTGTCGCTGGCCGTGTGCGCGCTGCTCTTCCTGCTGTGGGTGCGCCTGAAGGGGCTGGAGTTCGTGCTC ATCCACCAGCGCTGGGTGTTCGTGTGCCTCTTCCTCCTGCCGCTCTCGCTTATCTTCGATATCTACTACTACGTGCGCGCCTGGGTGGTG TTCAAGCTCAGCAGCGCTCCGCGCCTGCACGAGCAGCGCGTGCGGGACATCCAGAAGCAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAG ACCTTCATGTGCACGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTGTCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAAC CTGATGGACATTCTGGAAGTGGACACCAAGAAACAGATTGTCCGTGTGGAGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACC TCCATTGGCTGGACTCTCCCCGTGTTGCCTGAGCTTGATGACCTCACAGTGGGGGGCTTGATCATGGGCACAGGCATCGAGTCATCATCC CACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCCTGGCTGATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAAC TCAGACCTGTTCTATGCCGTACCCTGGTCCTGTGGGACGCTGGGTTTCCTGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTAC GTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCAAGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTG GAAGGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCATGACAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGGC AATTACTACAAGCCGTGGTTCTTTAAGCATGTGGAGAACTATCTGAAGACAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTAC TACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCCAGGACATTATCCCCTTTGGCAACAACCCCATCTTCCGCTACCTCTTTGGCTGG ATGGTGCCTCCCAAGATCTCCCTCCTGAAGCTGACCCAGGGTGAGACCCTGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATG CTGGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTTCCAAAACGACATCCACGAACCGTGGAGCATGCAACACATCCCGGCACTG TTTTCGGCCTTCTGTGGCCTCTTGGTCGCCCTTTCTTACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCCTTCATCCAA TGCAGGCTGTTTCCTAAATTTTTACATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTCAGTGACGGAT GTCTTAAAATGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTCTCATTTGCAGTCAGCGCCAGCACTGTATTCCTGTCATTGCGACCA TTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGCCGTGGGGTTTGTAACACATTACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGG ATGTGGATTTCACACCCCATTCTCAAAAACAAAGAGTATCATCAACGGGAAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTC TATGTTTGGCTTCAGTGTTTTGAAAAATACATCTTGTACCCAGCGCTAATTTTGAATGCCCTCACTATTGATGCATTTTTAATAAGCAAT CACCGGAGACTTGGTACCCACTGGGACATTTTTCTGATGATCATTGCTGGCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTTAC CAGTTTATTAACTTGAGCTTCACTGTCATCTTTTTCCACTTTGACTACAAAGATATTTCAGAGAGCTTCTTACTGGATTTCTTCATGGTG TCCATTTTATTTAGCAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCGTCCTGACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTCT TCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCATGCTTTTCTTTCAGACGATTGCCACATCAATCTTTTCTACCCCA TTGAGCCCATTTCTTGGGAGTGTCATTTTCATCACATCATATGTCAGGCCAGTGAAATTCTGGGAGAAAAACTACAATACAAGGCGAGTG GATAATTCCAACACAAGACTGGCAGTCCAAATTGAAAGAGATCCAGGGAATGATGACAACAATCTCAATTCCATTTTTTATGAACACTTG ACAAGGACCCTCCAGGAGTCCCTCTGTGGAGACTTAGTTCTTGGACGTTGGGGCAACTACAGCTCTGGCGATTGCTTTATTTTGGCTTCA GATGACCTCAATGCCTTTGTTCACCTGATTGAAATTGGAAATGGTCTTGTCACCTTTCAACTTCGAGGACTGGAATTCCGAGGAACCTAC TGCCAGCAGAGGGAGGTAGAAGCCATCATGGAGGGCGACGAGGAGGACAGAGGCTGCTGCTGCTGCAAACCAGGCCACTTGCCTCACCTG CTGTCCTGCAACGCTGCCTTTCACCTCCGCTGGCTCACCTGGGAAATCACGCAGACCCAGTACATCCTGGAGGGCTACAGCATCCTGGAC AACAACGCGGCCACCATGCTGCAGGTGTTTGACCTCCGAAGGATCCTCATCCGCTACTACATCAAGAGTATAATATACTATATGGTAACG TCTCCCAAACTCCTCTCCTGGATCAAAAATGAATCACTTCTGAAGTCCCTGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTT GCAATGTTCAACATTAACATTGATGATGACTACGTCCCGTGTCTCCAGGGGATCACACGAGCTAGCTTCTGCAATGTTTATCTAGAATGG ATTCAACACTGTGCACGGAAAAGACAAGAGCCTTCAACGACCCTGGACAGTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTG TGCACCCTGGGGAGGAGAGCTCTGGGAACAGCCGCTCACAATATGGCCATCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTC AAAGGTGACTTCAGAATAACAGCACGTGACGAGTGGGTATTTGCTGACATGGACCTACTGCATAAAGTTGTAGCTCCAGCTATCAGGATG TCCCTGAAACTTCACCAGGACCAGTTCACTTGCCCTGACGAGTATGAAGACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAG AAGGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGCTGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTG GACGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCACAGAAGCTTCCTGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGA GGACTTTGGGCCGGGCAGCAGCAGGAGCTTATATTTCTTCGCAACCGCAATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTG CGGAACTTGATTAACTCCTCCTGCGATCAGCCCCTGGGGTACCCCATGTATGTCTCCCCACTAACCACATCCTACCTAGGGACACACAGG CAGCTGAAGAACATCTGGGGTGGACCCATCACTTTGGACAGAATTAGGACCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAAGGATTGC AATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAGGGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGGC AGCCAGGAGAGCAGCGCAGAACAGCCCAGAAAAGGCGGTGCTCAGCACGGGGTGTCATCCTGTGAAGGGACACAGAGAACAGGCAGGAGG AAAGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCTAAGCCAAAGGCCGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGC CAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGCTCTCGGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTCC CTGCACTCTCAGCCCCCGCCCGTCACCACCACCGGCCACCTGAGTGTCCGTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCC TCCACCAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCAGCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGAGGGGGGC AATACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCCCCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGCACCTCTCC GAGCCATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGCTTCATGACCGATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTC TGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGCAGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGG GCGGGGAGGCTGGCTCCCCCACACCTCCCACCTGCATTGCTCTCCCTCGTGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCAT GAGGGACTCCTCCTGTGGAAAAGGAGAGCTGTTCCAGAACACAGAACTGATCTCAGGTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAA TCAAACAACAACAACAAAAAAACCTCACATGATGGGGAAACAAAAAAAAGCAACAAAGAAGCCACACCACACCTCCCTGGCCAGGCACAG CGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCAGAATCTGAAATCTCAAAAGCCATTCACTAACTTAAAACAACTCAA CAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTACATCATCGGCACTTTATACATTACTGTTACCATGAAAAAGA AATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGGTTAAATCTAAGTGTCAAGAAAACCCTATTTCTTTATAATAT TTATGCAGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCGTGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAG CCAGGATACGTTAGGATGTGAGTTTAGAAACTGAGTCCATTCGGTGCATGGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGT CCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCGTGCTTGTTCTCCAAGCCCCGCAACCCTTACTGTGCACACAA >In-frame_DHCR24_ENST00000535035_chr1_55319710_-_PCNXL2_ENST00000258229_chr1_233314921_-_5395nt AGCTGCGGTGCGGGGGCGGCCAGGACTTCCTGGGGGGGTGGGGAGCTGGCGTTGGAGAGGGGTTGGAACGAAACAAAAATGTGATGGGGG CGGGGGAACAGAACAGGCAAAGTGCCCACTGTGTGCAGGGCATATGCGGGTACCTGGAGGGAGATGAAGAAGGGGAAGAGGGGGAGGTGC GAAGCACTCAGGTGCGGGAATGGAAGGAGCAGGGTAGCAAGACCTTCATGTGCACGGGGCGCCCTGGCTGGCTCACTGTCTCACTACGTG TCGGGAAGTACAAGAAGACACACAAAAACATCATGATCAACCTGATGGACATTCTGGAAGTGGACACCAAGAAACAGATTGTCCGTGTGG AGCCCTTGGTGACCATGGGCCAGGTGACTGCCCTGCTGACCTCCATTGGCTGGACTCTCCCCGTGTTGCCTGAGCTTGATGACCTCACAG TGGGGGGCTTGATCATGGGCACAGGCATCGAGTCATCATCCCACAAGTACGGCCTGTTCCAACACATCTGCACTGCTTACGAGCTGGTCC TGGCTGATGGCAGCTTTGTGCGATGCACTCCGTCCGAAAACTCAGACCTGTTCTATGCCGTACCCTGGTCCTGTGGGACGCTGGGTTTCC TGGTGGCCGCTGAGATCCGCATCATCCCTGCCAAGAAGTACGTCAAGCTGCGTTTCGAGCCAGTGCGGGGCCTGGAGGCTATCTGTGCCA AGTTCACCCACGAGTCCCAGCGGCAGGAGAACCACTTCGTGGAAGGGCTGCTCTACTCCCTGGATGAGGCTGTCATTATGACAGGGGTCA TGACAGATGAGGCAGAGCCCAGCAAGCTGAATAGCATTGGCAATTACTACAAGCCGTGGTTCTTTAAGCATGTGGAGAACTATCTGAAGA CAAACCGAGAGGGCCTGGAGTACATTCCCTTGAGACACTACTACCACCGCCACACGCGCAGCATCTTCTGGGAGCTCCAGGACATTATCC CCTTTGGCAACAACCCCATCTTCCGCTACCTCTTTGGCTGGATGGTGCCTCCCAAGATCTCCCTCCTGAAGCTGACCCAGGGTGAGACCC TGCGCAAGCTGTACGAGCAGCACCACGTGGTGCAGGACATGCTGGTGCCCATGAAGTGCCTGCAGCAGGCCCTGCACACCTTCCAAAACG ACATCCACGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCCTTCTGTGGCCTCTTGGTCGCCCTTTCTTACCATCTGAGCC GTCAGAGCAGTGACCCATCTGTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCTAAATTTTTACATCAAAATCTGGCAGAGTCAGCTG CTGACCCTCTCCCCAAGAAGATGAAAGATTCAGTGACGGATGTCTTAAAATGGGATCTCATCGTCTGCGCAGTGGTTGCTGTCCTCTCAT TTGCAGTCAGCGCCAGCACTGTATTCCTGTCATTGCGACCATTTCTCAGCATCGTGCTGTTTGCCTTGGCTGGAGCCGTGGGGTTTGTAA CACATTACGTGCTCCCTCAGCTCCGCAAGCATCATCCCTGGATGTGGATTTCACACCCCATTCTCAAAAACAAAGAGTATCATCAACGGG AAGTGAGAGATGTTGCCCATTTAATGTGGTTCGAAAGACTCTATGTTTGGCTTCAGTGTTTTGAAAAATACATCTTGTACCCAGCGCTAA TTTTGAATGCCCTCACTATTGATGCATTTTTAATAAGCAATCACCGGAGACTTGGTACCCACTGGGACATTTTTCTGATGATCATTGCTG GCATGAAGCTGTTGCGGACATCATTCTGCAACCCGGTTTACCAGTTTATTAACTTGAGCTTCACTGTCATCTTTTTCCACTTTGACTACA AAGATATTTCAGAGAGCTTCTTACTGGATTTCTTCATGGTGTCCATTTTATTTAGCAAGCTCGGGGACCTGCTTCACAAGTTACAGTTCG TCCTGACATATGTGGCTCCTTGGCAGATGGCTTGGGGTTCTTCGTTTCACGTGTTTGCTCAGCTCTTTGCCATTCCTCATTCTGCCATGC TTTTCTTTCAGACGATTGCCACATCAATCTTTTCTACCCCATTGAGCCCATTTCTTGGGAGTGTCATTTTCATCACATCATATGTCAGGC CAGTGAAATTCTGGGAGAAAAACTACAATACAAGGCGAGTGGATAATTCCAACACAAGACTGGCAGTCCAAATTGAAAGAGATCCAGGGA ATGATGACAACAATCTCAATTCCATTTTTTATGAACACTTGACAAGGACCCTCCAGGAGTCCCTCTGTGGAGACTTAGTTCTTGGACGTT GGGGCAACTACAGCTCTGGCGATTGCTTTATTTTGGCTTCAGATGACCTCAATGCCTTTGTTCACCTGATTGAAATTGGAAATGGTCTTG TCACCTTTCAACTTCGAGGACTGGAATTCCGAGGAACCTACTGCCAGCAGAGGGAGGTAGAAGCCATCATGGAGGGCGACGAGGAGGACA GAGGCTGCTGCTGCTGCAAACCAGGCCACTTGCCTCACCTGCTGTCCTGCAACGCTGCCTTTCACCTCCGCTGGCTCACCTGGGAAATCA CGCAGACCCAGTACATCCTGGAGGGCTACAGCATCCTGGACAACAACGCGGCCACCATGCTGCAGGTGTTTGACCTCCGAAGGATCCTCA TCCGCTACTACATCAAGAGTATAATATACTATATGGTAACGTCTCCCAAACTCCTCTCCTGGATCAAAAATGAATCACTTCTGAAGTCCC TGCAGCCCTTTGCCAAGTGGCATTACATTGAGCGTGACCTTGCAATGTTCAACATTAACATTGATGATGACTACGTCCCGTGTCTCCAGG GGATCACACGAGCTAGCTTCTGCAATGTTTATCTAGAATGGATTCAACACTGTGCACGGAAAAGACAAGAGCCTTCAACGACCCTGGACA GTGACGAGGACTCTCCCTTGGTGACTCTGTCCTTCGCCCTGTGCACCCTGGGGAGGAGAGCTCTGGGAACAGCCGCTCACAATATGGCCA TCAGCCTGGATTCTTTCCTGTATGGCCTCCATGTCCTCTTCAAAGGTGACTTCAGAATAACAGCACGTGACGAGTGGGTATTTGCTGACA TGGACCTACTGCATAAAGTTGTAGCTCCAGCTATCAGGATGTCCCTGAAACTTCACCAGGACCAGTTCACTTGCCCTGACGAGTATGAAG ACCCAGCAGTCCTCTACGAGGCCATCCAGTCCTTCGAGAAGAAGGTGGTCATCTGCCACGAGGGCGACCCGGCCTGGCGGGGCGCAGTGC TGTCCAACAAGGAAGAGCTGCTCACCCTGCGGCACGTGGTGGACGAGGGTGCCGACGAGTACAAGGTCATCATGCTCCACAGAAGCTTCC TGAGCTTCAAGGTGATCAAGGTTAACAAAGAATGCGTCCGAGGACTTTGGGCCGGGCAGCAGCAGGAGCTTATATTTCTTCGCAACCGCA ATCCGGAGCGCGGCAGTATCCAGAACAATAAGCAGGTCCTGCGGAACTTGATTAACTCCTCCTGCGATCAGCCCCTGGGGTACCCCATGT ATGTCTCCCCACTAACCACATCCTACCTAGGGACACACAGGCAGCTGAAGAACATCTGGGGTGGACCCATCACTTTGGACAGAATTAGGA CCTGGTTCTGGACCAAGTGGGTAAGGATGCGGAAGGATTGCAATGCCCGCCAGCACAGTGGCGGCAACATTGAAGACGTGGACGGAGGAG GGGCCCCGACGACAGGTGGCAACAATGCCCCGAGTGGTGGCAGCCAGGAGAGCAGCGCAGAACAGCCCAGAAAAGGCGGTGCTCAGCACG GGGTGTCATCCTGTGAAGGGACACAGAGAACAGGCAGGAGGAAAGGCAGGAGCCAGTCCGTGCAGGCACACTCAGCGCTAAGCCAAAGGC CGCCCATGCTGAGCTCATCTGGCCCCATCTTAGAGAGCCGCCAAACATTCCTCCAGACGTCCACCTCAGTGCACGAGCTGGCCCAGAGGC TCTCGGGCAGCCGGCTCTCCTTGCACGCCTCGGCCACGTCCCTGCACTCTCAGCCCCCGCCCGTCACCACCACCGGCCACCTGAGTGTCC GTGAGCGGGCCGAGGCGCTCATCAGGTCCAGCCTGGGCTCCTCCACCAGCTCCACCCTGAGCTTCCTCTTCGGCAAGAGGAGCTTTTCCA GCGCGCTCGTCATTTCCGGACTCTCTGCTGCGGAGGGGGGCAATACCAGTGACACCCAGTCATCCAGCAGCGTCAACATCGTGATGGGCC CCTCAGCCAGGGCTGCCAGCCAGGCCACTCGGCACCTCTCCGAGCCATGTGAGCCCCCTGATGCCACCGAGCAGGGGCAGCTTCATGACC GATGTCTGGCTGAGGCTGTGGCGGACACTCTCGGGGTTGTCTGCAGGAGAGCAAGCCAGGAGGACATGGGCCTGGACGACACGGCCTCGC AGCAAAGTGTGTCAGACGAGCAGTGACGGGCGTGCGGCCGGGCGGGGAGGCTGGCTCCCCCACACCTCCCACCTGCATTGCTCTCCCTCG TGCTCCCCAAATCACCACAACCAACCAATACCGCGATCCATGAGGGACTCCTCCTGTGGAAAAGGAGAGCTGTTCCAGAACACAGAACTG ATCTCAGGTTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAACAACAACAACAAAAAAACCTCACATGATGGGGAAACAAAAAAAA GCAACAAAGAAGCCACACCACACCTCCCTGGCCAGGCACAGCGCTGCCCAGAGCGGCACACCGCGGACAGCACCACACATGTTCCAGAAT CTGAAATCTCAAAAGCCATTCACTAACTTAAAACAACTCAACAGAGCCATGAAACAAATGCCCTGATGAAAATAAGACAACTGCATGTTA CATCATCGGCACTTTATACATTACTGTTACCATGAAAAAGAAATGAACAGCAGCACGTCTGATACCATCAGCTGGGCAGATGCATTAAGG TTAAATCTAAGTGTCAAGAAAACCCTATTTCTTTATAATATTTATGCAGCTGTTAAGCGTAACATGGTGGCAGCTTCACAACAAGAACCG TGATCATGCATGCAGTCATGTCTCCAGTATTCTGTGAAAAGCCAGGATACGTTAGGATGTGAGTTTAGAAACTGAGTCCATTCGGTGCAT GGAAATCCACCGCGGAGTCACACAATGCTCCTCACTGTAGTCCAGGCGATTGGTGGGCCGCCAGCACCCTGCGGGCTTCACAGGGACGCG |
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FusionGenePPI for DHCR24_PCNXL2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DHCR24 | TP53, UBL4A, EGFR, IKBKB, ACTA2, ATP12A, FUNDC2, REEP5, ERAP1, HRAS, LUZP1, GBA, SNCA, CKAP5, NANOG, POU5F1, COQ9, NDUFA4, CISD3, ATP6V0D1, PTPN1, PTPN5 | PCNXL2 | MUS81, PTTG1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for DHCR24_PCNXL2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for DHCR24_PCNXL2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | DHCR24 | C0002395 | Alzheimer's Disease | 1 | CTD_human |
Hgene | DHCR24 | C0034362 | Q Fever | 1 | CTD_human |
Hgene | DHCR24 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
Hgene | DHCR24 | C1865596 | Desmosterolosis | 1 | CTD_human;ORPHANET;UNIPROT |