|
Fusion gene ID: 9806 |
FusionGeneSummary for DGCR2_GNB1L |
Fusion gene summary |
Fusion gene information | Fusion gene name: DGCR2_GNB1L | Fusion gene ID: 9806 | Hgene | Tgene | Gene symbol | DGCR2 | GNB1L | Gene ID | 9993 | 54584 |
Gene name | DiGeorge syndrome critical region gene 2 | G protein subunit beta 1 like | |
Synonyms | DGS-C|IDD|LAN|SEZ-12 | DGCRK3|FKSG1|GY2|WDR14|WDVCF | |
Cytomap | 22q11.21 | 22q11.21 | |
Type of gene | protein-coding | protein-coding | |
Description | integral membrane protein DGCR2/IDDDiGeorge syndrome critical region protein 2integral membrane protein deleted in DiGeorge syndrome | guanine nucleotide-binding protein subunit beta-like protein 1G-protein beta subunit-like proteinWD repeat-containing protein 14WD40 repeat-containing protein deleted in VCFSg protein subunit beta-like protein 1guanine nucleotide binding protein (G p | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | P98153 | Q9BYB4 | |
Ensembl transtripts involved in fusion gene | ENST00000537045, ENST00000263196, ENST00000545799, ENST00000473832, | ENST00000329517, ENST00000403325, ENST00000405009, ENST00000460402, | |
Fusion gene scores | * DoF score | 13 X 10 X 8=1040 | 5 X 5 X 5=125 |
# samples | 15 | 5 | |
** MAII score | log2(15/1040*10)=-2.79354912253257 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/125*10)=-1.32192809488736 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: DGCR2 [Title/Abstract] AND GNB1L [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SKCM | TCGA-FS-A1ZK-06A | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000537045 | ENST00000329517 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
Frame-shift | ENST00000537045 | ENST00000403325 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5CDS-intron | ENST00000537045 | ENST00000405009 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5CDS-5UTR | ENST00000537045 | ENST00000460402 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
Frame-shift | ENST00000263196 | ENST00000329517 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
Frame-shift | ENST00000263196 | ENST00000403325 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5CDS-intron | ENST00000263196 | ENST00000405009 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5CDS-5UTR | ENST00000263196 | ENST00000460402 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
In-frame | ENST00000545799 | ENST00000329517 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
In-frame | ENST00000545799 | ENST00000403325 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5CDS-intron | ENST00000545799 | ENST00000405009 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5CDS-5UTR | ENST00000545799 | ENST00000460402 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5UTR-3CDS | ENST00000473832 | ENST00000329517 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5UTR-3CDS | ENST00000473832 | ENST00000403325 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5UTR-intron | ENST00000473832 | ENST00000405009 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
5UTR-5UTR | ENST00000473832 | ENST00000460402 | DGCR2 | chr22 | 19052361 | - | GNB1L | chr22 | 19776483 | - |
Top |
FusionProtFeatures for DGCR2_GNB1L |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
DGCR2 | GNB1L |
Putative adhesion receptor, that could be involved incell-cell or cell-matrix interactions required for normal celldifferentiation and migration. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for DGCR2_GNB1L |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_DGCR2_ENST00000545799_chr22_19052361_-_GNB1L_ENST00000329517_chr22_19776483_-_263aa MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDPRQGRAR GGDPSHFHAVNVAQPVRFSRKCPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKDQRK >In-frame_DGCR2_ENST00000545799_chr22_19052361_-_GNB1L_ENST00000403325_chr22_19776483_-_263aa MVPKADSGAFLLLFLLVLTVTEPLRPELRCNPGQFACRSGTIQCIPLPWQCDGWATCEDESDEANCPEVTGEVRPHHGKEAVDPRQGRAR GGDPSHFHAVNVAQPVRFSRKCPTGWHHYEGTASCYRVYLSGENYWDAAQTCQRLNGSLATFSTDQELRFVLAQEWDQPERSFGWKDQRK |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_DGCR2_ENST00000545799_chr22_19052361_-_GNB1L_ENST00000329517_chr22_19776483_-_791nt ATGGTGCCCAAGGCAGACAGCGGCGCCTTCCTGCTGCTCTTCCTGCTCGTGCTCACTGTCACCGAGCCGCTGCGGCCAGAGCTGCGGTGC AACCCTGGGCAGTTTGCGTGTCGCAGCGGCACCATCCAGTGCATCCCCCTCCCCTGGCAGTGTGACGGCTGGGCGACTTGCGAGGATGAG AGCGACGAAGCCAACTGTCCAGAAGTGACCGGGGAGGTGCGTCCTCATCATGGGAAGGAGGCTGTGGATCCGCGGCAGGGGCGGGCCAGA GGAGGCGACCCTTCGCACTTCCACGCGGTGAACGTGGCGCAGCCCGTTCGCTTCAGCAGGAAGTGCCCGACAGGGTGGCACCACTACGAA GGCACGGCCAGCTGCTACCGGGTCTACCTGAGCGGGGAGAACTACTGGGATGCCGCGCAGACCTGCCAGCGCCTGAATGGCTCTCTCGCC ACCTTCTCCACTGACCAGGAGCTGCGCTTTGTCCTGGCCCAGGAATGGGACCAGCCCGAGCGGAGCTTTGGTTGGAAGGACCAGCGCAAG TGCGTGGGACTCATGAACTCACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACC ACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCG >In-frame_DGCR2_ENST00000545799_chr22_19052361_-_GNB1L_ENST00000403325_chr22_19776483_-_791nt ATGGTGCCCAAGGCAGACAGCGGCGCCTTCCTGCTGCTCTTCCTGCTCGTGCTCACTGTCACCGAGCCGCTGCGGCCAGAGCTGCGGTGC AACCCTGGGCAGTTTGCGTGTCGCAGCGGCACCATCCAGTGCATCCCCCTCCCCTGGCAGTGTGACGGCTGGGCGACTTGCGAGGATGAG AGCGACGAAGCCAACTGTCCAGAAGTGACCGGGGAGGTGCGTCCTCATCATGGGAAGGAGGCTGTGGATCCGCGGCAGGGGCGGGCCAGA GGAGGCGACCCTTCGCACTTCCACGCGGTGAACGTGGCGCAGCCCGTTCGCTTCAGCAGGAAGTGCCCGACAGGGTGGCACCACTACGAA GGCACGGCCAGCTGCTACCGGGTCTACCTGAGCGGGGAGAACTACTGGGATGCCGCGCAGACCTGCCAGCGCCTGAATGGCTCTCTCGCC ACCTTCTCCACTGACCAGGAGCTGCGCTTTGTCCTGGCCCAGGAATGGGACCAGCCCGAGCGGAGCTTTGGTTGGAAGGACCAGCGCAAG TGCGTGGGACTCATGAACTCACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCCTGGCCACCGCAGGCTGGGACC ACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTGTCCAGTGCGTGGCCTTCACCG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_DGCR2_ENST00000545799_chr22_19052361_-_GNB1L_ENST00000329517_chr22_19776483_-_6477nt GCGCGCAGCTGGAGTCGGTGCCTGAGGTTGCAGCCGAGAGTGTGCGCCAGCCCGCGGCCCAGCCGAAGCTCTTTCCCGCCGCCTCTCCGC GCCTCGCCCAGGTTCAGCTCCGCCTGACCCTCCGCTTGGCACGGTCCCCTGACCCTCAGTCCGGCCTGGTCCGGCCTTCCAGCCGCCCCG GGGACGATGAACGGAGGATAAATGGTGCCCAAGGCAGACAGCGGCGCCTTCCTGCTGCTCTTCCTGCTCGTGCTCACTGTCACCGAGCCG CTGCGGCCAGAGCTGCGGTGCAACCCTGGGCAGTTTGCGTGTCGCAGCGGCACCATCCAGTGCATCCCCCTCCCCTGGCAGTGTGACGGC TGGGCGACTTGCGAGGATGAGAGCGACGAAGCCAACTGTCCAGAAGTGACCGGGGAGGTGCGTCCTCATCATGGGAAGGAGGCTGTGGAT CCGCGGCAGGGGCGGGCCAGAGGAGGCGACCCTTCGCACTTCCACGCGGTGAACGTGGCGCAGCCCGTTCGCTTCAGCAGGAAGTGCCCG ACAGGGTGGCACCACTACGAAGGCACGGCCAGCTGCTACCGGGTCTACCTGAGCGGGGAGAACTACTGGGATGCCGCGCAGACCTGCCAG CGCCTGAATGGCTCTCTCGCCACCTTCTCCACTGACCAGGAGCTGCGCTTTGTCCTGGCCCAGGAATGGGACCAGCCCGAGCGGAGCTTT GGTTGGAAGGACCAGCGCAAGTGCGTGGGACTCATGAACTCACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCC TGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTG TCCAGTGCGTGGCCTTCACCGCCGATGGCTTGCTGGCCGCGGGCTCCAAGGATCAGCGGATCAGCCTCTGGTCACTCTACCCACGCGCAT GACTCACCCACTCCCTTCCCGGGAGACGAGGAGGGCGGGCAGGGAGGTGGGCATCAGGCCCCAGCCTTGGCCTGAAACCTCAAGGGCCTC TGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTCCTTTTGTGGAGTGCCTCATCACAG GACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGTCCGAGGCCTGCAGGAGACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGT ATTTTATAATAAATTTCCATTGCCAAGTTGCAGGCTTGAGGTGGGAGCTCCCTGAGGAGGCCCTGGTCCCCCACTTAGCATCAGTGCCCT CAGACCCCCACCAGGCAGGATGCTCAGCCCCACCCTCACACCTGCTGTTGAATGGGCCACCCCGAGTGTGGGTTTCCTGGGCCAGGCCTC AGGAGATGATAGGCCCCAACCATAGCTGCGTCGATGTCCACATGACCCCTCACCCCGAGGAGGCCAGGAGCTCCCAACACACAGGTTGAG GCCAGGATCAGGATCAGGAAGTAACTGAACTCCCTAAAGAGTGAAGCAGAGAAAGGTGCCTGTGAGGGACGGCAAGGGGGGCTTGCAGCG CACAGGGCCAGGCCAGATGTGGGATCCGGGAGGGCACGCCTGCCCGCAGAGGGTGCAGTGGGGAAGGCGCACAGGGTGCACCTCCAGGTG AGTGCTGGGCAGAAGGCACGAGAGCAGCAAGGGAGTGTGACAAGCACCGCCTCACAGTGGCCAAGGCCACAGTCACAGCTGCGGCTGCAC ACAGGGTGGCCCCCAGGGCACAACACAGCAAGAGCAGGACTTAGCAGCCAGAGCCTCACACTGCATGCAGCCGGGCCCAGCCTGGCCGGT CGTCTCCTCCTAAAAGCGGGTGTTGATTGGGAAAGAACCATGACCCTGAATATTGGAGTGGGGCCCATGGGCAGATCCAGAGAAGCTGGG ACCACACACGCCTGTGTCTGCCCGGATTGCCGGAAGAGCCCCTCTAGCTGAAGGCCCGGGGTGGCCTCCCTTGAGGCAGTTGCCCTGCAA GGCCCTGCCGATGCTCCTTGGGACCCCCACCTGGGCTTCTAGTCCTAGAACTAGACTCGAGTCCAGCAGACCCCCAGGATGAGATACAGA GGGTGACCCTGAGAGTGGCACCAGCCTCCTGCAGGACCACATGGCATTTCCAGGTTTCCAGGCAGAAATCTGAACATGTGTGGGACGGAT CGGAAGGGTGTGGGATCCAGGTGGCCGGAGCAGGGGTGGATCAGGGGAGTTCCCGGAACAGACCTGCCAAACGGAGGGCTGGACTGGGCG CTGCAGCTTGGGGCCAGGAAGGCTCCAGTGCCGGGCTGGGGGTGGGGGCTGGATTACAGCCTGAGGGTGGCTGCACTGAGTGAAGTGGAC ATGGCCAGCCGCCGTGGGGTACAGCCGAGGAGGGCTTCCAAGGCCTGGGGATGGGGGTGTTGGATTTGTCAGTGAGACCTGTGCACCCAC TGCAGGGGGTCCCAAGGCCGTGCCTCCCCAACCCCACTGTGAGGAACATGGTTGCTGGGGGGCCCGGAGTCCTTGAGGAGTCCTGTGACC ACACTTCTCTGTTGGTCAGAGGTACCATGGGGACCGTTCCATCAAACGGGAATGTCAGTGCTGGCCGGGAAAGCGGCCCCTGGCCCAAGC TTGGAGACCACCTGGCTCGGGTACTGGCCTGGCTCCGTTGGACAAGGGTGGCCACCAGGTGCCCAGGACCTTTGGAGAGGGGGGCCCTGC TGCTTTTCCTCGAGTGTCCTATAGCCGCCAGGATGCGTAGGGCACTCCGGGAGGTATTTTCATATCACTGAGGTGTCAGGGAGGGGAAGG GTCCTGGGTTTAGGCTGCAGTGACTGCAGGTGCTGAGGGAGCTGTGCCCTGGGTGCTCATCACAGGCTGTCACAGTGAGGGAAGGTGTCA GGTTCTGACATCCCCATGACAGCGGCAGGGTAGGTGGAGTGGGAATTGGCTTTGCAGTTTCCCTGCATGCCCTTGACAGCCTTGCCAAAG GCACATCTGCCCCGCCTCAGCTCCCACCCTGAGGGTTCTGGGCCTCTACCCCTTCCCCTGTTTATGTCCCTGTCATCTTTGGCATCATCA CTGTAGTTACAAAACTCCCTACGTCCCACAGCCACGAGGTGGGTATCCCACATGAGGGCCCAGGTGTGCATGCCAGCATGAGGTTGGCGA GTGGCACTGCCTGCTGATGTCTTACATAGAGGCCATGAAGAGCTGTGGGCAGGGTGTACAGACCCTGAGTTGGCCCCTGGCCCTCGTGCT TTCAGTCAAAGGCACAAGCAGGGTGGATGGCAGGCGGCTGCCCCCTAGCCTGGCCTTGAGCTCCCTGCCCCAGGCCATGTGGCGTTGAGC AGTGTCCAGGCACATCTTGTTCTGAATCTCAGTGTGCAGGGATGGAGTCGGGACAGCGTGAGTCCTGCATGCCTAACACAGCCCTCACCC CTCCAGTGCACAACGGGGCCACGTGCCCGCATCTGGGTGGCTAGGCAGATAGGGCCCCCCTTGCCAGGCAGATCCAGCTTCTGAGGCCTT ATAGACGTCCTGTGGAGGGCAGGCCCAGGACTTTCATTCACCTGGCTGAGCTGCCTGGGAGAGCAGCAGAACCGGTGCTGGGGTCCAAGC CGGCCAAGAGCAGTGCAGCCCTCCTGGTCCTGTTCCTCTCTTGAGCTGCTCCGTGGTGTCCACAGCAGAGCCATGTGGCTCTGGACAGGT CGGCCTTTGTGTCAACAGAACCTGGGTCGTGATGAATCACCATGCGTCTGACCAGCCTTGAAACCCCCACAACAGAAGAAGAAACGGTCT CAGCTCCAGACATCCAGCTTGGAAAAGATGCACCTGAACATTGGCATTCTCTTCCTAGCAAACAGCCACTTCCTGTAGGCTGGCAGGAAC GCCAACAGAGCCAGCAGTGAAGGCATTAAGTGGGGAGGAGGGGTGGCCCGGAGGCAGCACGCGAAGGTCAGCATGCAGCTCCTGGGATGA ACCTGAGAGGCGACTCCTGGCAGCATGGCTGGTCGCTGCCATCACGCCCCTGGCCAACCCACCAACTGGGAGAGGCAGCCCTTCCACATC TTCCTCCATAATGCTCTTGGGTAGCAGTGAGGCCTCTCAAGCCAGAGAGAACTTGGTGTTTGGAAACAACGGCGGACATTTCTTGCCATT TTCAGTGCCAACTCAGGTAGGTGTGTTCTACCATCCTGTGTTTTTGGGGTGTTTTTTTTTTTGAGTCAGAGTCTCACTCTGTCCCCCAGG CTGGAGTGCAATGGAGCAGTCTCGGCTCACTGCAACCTCTGATTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGAAGCTCAG GACCACCCACATAGGTGCAGGCCATCATGCCCAGCTAATTTTTTATTTTTTTTTATAGAGAAGGAGTCTCGCTATGTTGCCCAGGCTGGT TTCGAACTCCTGGGCTCAAGCGATCGATCCTCCCGCCTCTAGCCTCCCAAAGCACTAGAATTATAGGCCTGAGCCACTGCGCCCGGCCCA CCATCCTGTTCTTATTGGAAGAATTTCCATGTGTCGAGGCACGGGCACAACGTAGCTGGTCCTCTGCTCAGGGCCCCACAAGGCTGCGTC AGGGTGGCAGCGCGGCTGGGGGCTTTTTCTGTTCAAATCCAGATTCTCGTGGCTGTGAGCCCCAGCCCTGGGCACTGTCCGCCTGGTGGT GTCTTCACAGCCAGCAGGGGTGGCCTTGGGGTGTTCTGTGGAGTAACTTTCACGGCCCAGAGTGGGATCCTGAGTGGCTGGAGCCGTATG CTCCAGCATCCCCAGCCGCTGCCTCCGGTGCAGGTGGAGTGGGCCCCTCTGATTACCAGGAGCTGTCAGAGGGGCAGCAGGTCCCACTCC ACTGGCCGGTGGGCAGCTGTGTGCAGGGACGCGGGTCCTGGCACGTCTGCCTGGTGAGGCCCTGCCTCCAGTGCCAAGGGGCCTCCCCTC TCGACGGTGGGCGCCACCATGTGCTGACCTCTGTGCAGCCCCACTTTACAAGGTAGGTTCGGCCAGCACCCCATCCGCGGGCGGGCAGCA CTCACCCAGCGTTGCGCCGCCAACAGGGTCCCTCTTAGACAAGCAGCTGTGCCTAGAGCCTTTTCCTTCCTCCCTGCGTGTTACCTGCAG GCCAACAGACGGCCCTGGGTCTGGGACCAGGAGAACCTGCCTCCGCCTCTGGCAGTGGGTGTCCCTGCAGGCAGATTGGGCTTGGCACGT AGACACCGAGGGGTCAGCCGATGCCGGGAGATGATCCCGGGAAGGGCTCCGGAGCACAGCCCAGGACCCGCCGCCGCTGCTGGGCGCTCC ATGTTGACGTGCTGTGCGTGTCTCCACTCCCCAGGCAATGATGTTCAATCAGGTGTTTCCCACCTGTGTCTCTGCCAAGAAGCCACAGAA CACCCTCTGCACAAAAGGAGTGTTTGCACAAAGAAAAACAACCCTCCGGGGGTTCTTTAGAAATGCTTATACTCAATTAGCTAGAACTTC ATGTGAAATCCCAGCGTGGAAGACAACAAGCCGGCACCGGTGAAAACTTTGCTGTGCACCTGCCCTCTACCAAGCTGCCAGCCCCACCAG CCCTGTGGTCCTAGGTGGGCACAGCTGCTGCACGGTCCCCCAGGCCTGCCTCTCCTCGGGGTCTCAACCTTCATACCAGATTTGCCAGCA TCCCCATTCCCGCCTTGTGGGTGGAGAGTCCTTGAGACCCTCTGTCACTCTGTCAGCTTCCCCAGGTCAGCGAGCTGTGGCTTGGCTCCC ACGCATCAGCTTTTATGGGAGGCCCATTAGGAGCTGGGCAGGAGGGACAGAGGGGAGGCCAGGCAGCCACTGCTGAGTGGGACGGGTAGC CCAGCCCATGAGGCTGGCCAGCCCTACAGGGGAGGTCCCACAGCACTGGCCGGGAAGTCCACATAGGAAAGCATCAGTTGAGGGATGAAG CCACGGACGATGGGGACAACGGCCACAGGGTGTGCTAAGCTGAGGAAATTAGTAGGAGGTGCTCATAAGCTGTTTTGTTTTTTGGTTTGT TTGTTTGTTTTTTCTTTTAAGAGACCAGGGACAGTGGGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATCATAGCTTACT GCAGCCTCCAACTAATAGGCTCAAGTGATCCTCCTGCCTCAGCCTCCCGAGTAACTCATGGCCTTTAAGTGAACTGCTTCCACCATCCAG CTGTGCAGGTGGCCTGGGAACAGCAGCACATCTGTCCCCTGCCACCTCTTGCATGCACACTTGACCTCCTGACTTGGGCTCTGAAACCTG >In-frame_DGCR2_ENST00000545799_chr22_19052361_-_GNB1L_ENST00000403325_chr22_19776483_-_1286nt GCGCGCAGCTGGAGTCGGTGCCTGAGGTTGCAGCCGAGAGTGTGCGCCAGCCCGCGGCCCAGCCGAAGCTCTTTCCCGCCGCCTCTCCGC GCCTCGCCCAGGTTCAGCTCCGCCTGACCCTCCGCTTGGCACGGTCCCCTGACCCTCAGTCCGGCCTGGTCCGGCCTTCCAGCCGCCCCG GGGACGATGAACGGAGGATAAATGGTGCCCAAGGCAGACAGCGGCGCCTTCCTGCTGCTCTTCCTGCTCGTGCTCACTGTCACCGAGCCG CTGCGGCCAGAGCTGCGGTGCAACCCTGGGCAGTTTGCGTGTCGCAGCGGCACCATCCAGTGCATCCCCCTCCCCTGGCAGTGTGACGGC TGGGCGACTTGCGAGGATGAGAGCGACGAAGCCAACTGTCCAGAAGTGACCGGGGAGGTGCGTCCTCATCATGGGAAGGAGGCTGTGGAT CCGCGGCAGGGGCGGGCCAGAGGAGGCGACCCTTCGCACTTCCACGCGGTGAACGTGGCGCAGCCCGTTCGCTTCAGCAGGAAGTGCCCG ACAGGGTGGCACCACTACGAAGGCACGGCCAGCTGCTACCGGGTCTACCTGAGCGGGGAGAACTACTGGGATGCCGCGCAGACCTGCCAG CGCCTGAATGGCTCTCTCGCCACCTTCTCCACTGACCAGGAGCTGCGCTTTGTCCTGGCCCAGGAATGGGACCAGCCCGAGCGGAGCTTT GGTTGGAAGGACCAGCGCAAGTGCGTGGGACTCATGAACTCACCAATCCCGGGATCGCCGAGGTCACGATCCGGCCAGATCGCAAGATCC TGGCCACCGCAGGCTGGGACCACCGCATCCGCGTGTTCCACTGGCGGACGATGCAGCCACTGGCCGTGCTGGCCTTCCACAGCGCCGCTG TCCAGTGCGTGGCCTTCACCGCCGATGGCTTGCTGGCCGCGGGCTCCAAGGATCAGCGGATCAGCCTCTGGTCACTCTACCCACGCGCAT GACTCACCCACTCCCTTCCCGGGAGACGAGGAGGGCGGGCAGGGAGGTGGGCATCAGGCCCCAGCCTTGGCCTGAAACCTCAAGGGCCTC TGAGGACCAGCAAGTCATGGCCCAAGGACCATGGAGTCCCCGCTGTCTTCATGAGGTTGGTATTTCCTTTTGTGGAGTGCCTCATCACAG GACGGTGACTCTGGGGGCCAGCCAGAGCCCTGGCCGTCCGAGGCCTGCAGGAGACGTTGGCTTGGGCCTGCTGTGTTGCCAGCTGAGGGT |
Top |
FusionGenePPI for DGCR2_GNB1L |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
DGCR2 | SMURF2, DDIT3, HNRNPD, IL9R, WWP2, PTPRK, ZACN, HTR3C, ADAM33 | GNB1L | GAS2L1, RABGGTB, RCN1, TEAD4, TEKT2, GSTM3, TMEM132A, MTMR14, ASPRV1, CNPY2, KCNJ5, CCT7, CCT3, PDDC1, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for DGCR2_GNB1L |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for DGCR2_GNB1L |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | DGCR2 | C0036341 | Schizophrenia | 1 | CTD_human |
Tgene | GNB1L | C0036341 | Schizophrenia | 4 | PSYGENET |
Tgene | GNB1L | C0033975 | Psychotic Disorders | 2 | PSYGENET |
Tgene | GNB1L | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | GNB1L | C0041696 | Unipolar Depression | 1 | PSYGENET |
Tgene | GNB1L | C0349204 | Nonorganic psychosis | 1 | PSYGENET |
Tgene | GNB1L | C1269683 | Major Depressive Disorder | 1 | PSYGENET |