	FusionGeneSummary
	FusionProtFeature
	FusionGeneSequence
	FusionGenePPI
	RelatedDrugs
	RelatedDiseases

Fusion gene ID: 9013

FusionGeneSummary for CUX1_CUX1

Fusion gene summary

Fusion gene information	Fusion gene name: CUX1_CUX1
	Fusion gene ID: 9013
		Hgene	Tgene
	Gene symbol	CUX1	CUX1
	Gene ID	1523	1523
	Gene name	cut like homeobox 1	cut like homeobox 1
	Synonyms	CASP\|CDP\|CDP/Cut\|CDP1\|COY1\|CUTL1\|CUX\|Clox\|Cux/CDP\|GOLIM6\|Nbla10317\|p100\|p110\|p200\|p75	CASP\|CDP\|CDP/Cut\|CDP1\|COY1\|CUTL1\|CUX\|Clox\|Cux/CDP\|GOLIM6\|Nbla10317\|p100\|p110\|p200\|p75
	Cytomap	7q22.1	7q22.1
	Type of gene	protein-coding	protein-coding
	Description	protein CASPCCAAT displacement proteincut homologgolgi integral membrane protein 6homeobox protein cux-1putative protein product of Nbla10317	protein CASPCCAAT displacement proteincut homologgolgi integral membrane protein 6homeobox protein cux-1putative protein product of Nbla10317
	Modification date	20180523	20180523
	UniProtAcc	Q13948	Q13948
	Ensembl transtripts involved in fusion gene	ENST00000437600, ENST00000292538, ENST00000393824, ENST00000547394, ENST00000360264, ENST00000425244, ENST00000292535, ENST00000549414, ENST00000556210, ENST00000550008, ENST00000546411, ENST00000560541,	ENST00000437600, ENST00000292538, ENST00000393824, ENST00000547394, ENST00000360264, ENST00000425244, ENST00000292535, ENST00000549414, ENST00000556210, ENST00000550008, ENST00000546411, ENST00000560541,
Fusion gene scores	* DoF score	20 X 18 X 9=3240	12 X 13 X 5=780
	# samples	22	14
	** MAII score	log2(22/3240*10)=-3.88041838424733 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0	log2(14/780*10)=-2.47804729680464 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0
Context	PubMed: CUX1 [Title/Abstract] AND CUX1 [Title/Abstract] AND fusion [Title/Abstract]
Functional or gene categories assigned by FusionGDB annotation

* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Partner

Gene

GO ID

GO term

PubMed ID

Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

Data type	Source	Cancer type	Sample	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
ChiTaRS3.1			AW810962	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
ChiTaRS3.1			AA077917	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
ChiTaRS3.1			BE143748	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+

* LD: Li Ding group's fusion gene list
RV: Roel Verhaak group's fusion gene list
ChiTaRs fusion database

Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.

ORF	Henst	Tenst	Hgene	Hchr	Hbp	Hstrand	Tgene	Tchr	Tbp	Tstrand
intron-intron	ENST00000437600	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292538	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000393824	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000547394	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000360264	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000425244	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000292535	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000549414	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000556210	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000550008	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000546411	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000437600	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000292538	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000393824	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000547394	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000360264	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000425244	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000292535	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000549414	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000556210	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000550008	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000546411	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000560541	ENST00000560541	CUX1	chr7	101619857	-	CUX1	chr7	101616719	+
intron-intron	ENST00000437600	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292538	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000393824	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000547394	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000360264	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000425244	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000292535	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000549414	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000556210	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000550008	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000546411	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000437600	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000292538	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000393824	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000547394	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000360264	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000425244	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000292535	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000549414	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000556210	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000550008	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000546411	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000560541	ENST00000560541	CUX1	chr7	101798309	+	CUX1	chr7	101798492	-
intron-intron	ENST00000437600	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000437600	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292538	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000393824	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000547394	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000360264	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000425244	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000292535	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000549414	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000556210	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000550008	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000546411	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000437600	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000292538	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000393824	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000547394	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000360264	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000425244	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000292535	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000549414	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000556210	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000550008	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000546411	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+
intron-intron	ENST00000560541	ENST00000560541	CUX1	chr7	101652851	-	CUX1	chr7	101573276	+

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FusionProtFeatures for CUX1_CUX1

Main function of each fusion partner protein. (from UniProt)

Hgene	Tgene
CUX1 Q13948	CUX1 Q13948
May be involved in intra-Golgi retrograde transport.{ECO:0000269\|PubMed:15718469}.	May be involved in intra-Golgi retrograde transport.{ECO:0000269\|PubMed:15718469}.

Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at
download page
.

* Minus value of BPloci means that the break pointn is located before the CDS.

- In-frame and retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

- In-frame and not-retained protein feature among the 13 regional features.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Protein feature

Protein feature note

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FusionGeneSequence for CUX1_CUX1

For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for CUX1_CUX1

Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in
ChiPPI page
.

Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)

Hgene

Hgene's interactors

Tgene

Tgene's interactors

- Retained PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Still interaction with

- Lost PPIs in in-frame fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

- Retained PPIs, but lost function due to frame-shift fusion.

Partner

Gene

Hbp

Tbp

ENST

Strand

BPexon

TotalExon

Protein feature loci

*BPloci

TotalLen

Interaction lost with

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RelatedDrugs for CUX1_CUX1

Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)

Partner

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CUX1_CUX1

Diseases associated with fusion partners.
(DisGeNet 4.0)

Partner	Gene	Disease ID	Disease name	# pubmeds	Source
Hgene	CUX1	C0041696	Unipolar Depression	3	PSYGENET
Hgene	CUX1	C1269683	Major Depressive Disorder	3	PSYGENET
Hgene	CUX1	C0525045	Mood Disorders	1	PSYGENET
Hgene	CUX1	C0596263	Carcinogenesis	1	CTD_human
Tgene	CUX1	C0041696	Unipolar Depression	3	PSYGENET
Tgene	CUX1	C1269683	Major Depressive Disorder	3	PSYGENET
Tgene	CUX1	C0525045	Mood Disorders	1	PSYGENET
Tgene	CUX1	C0596263	Carcinogenesis	1	CTD_human

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Fusion gene ID: 9013

FusionGeneSummary for CUX1_CUX1

FusionProtFeatures for CUX1_CUX1

FusionGeneSequence for CUX1_CUX1

FusionGenePPI for CUX1_CUX1

RelatedDrugs for CUX1_CUX1

RelatedDiseases for CUX1_CUX1