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Fusion gene ID: 8965 |
FusionGeneSummary for CUBN_ALDH16A1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: CUBN_ALDH16A1 | Fusion gene ID: 8965 | Hgene | Tgene | Gene symbol | CUBN | ALDH16A1 | Gene ID | 8029 | 126133 |
Gene name | cubilin | aldehyde dehydrogenase 16 family member A1 | |
Synonyms | IFCR|MGA1|gp280 | - | |
Cytomap | 10p13 | 19q13.33 | |
Type of gene | protein-coding | protein-coding | |
Description | cubilin460 kDa receptorcubilin (intrinsic factor-cobalamin receptor)cubilin precursor variant 1cubilin precursor variant 2cubilin precursor variant 3intestinal intrinsic factor receptorintrinsic factor-vitamin B12 receptor | aldehyde dehydrogenase family 16 member A1 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | O60494 | Q8IZ83 | |
Ensembl transtripts involved in fusion gene | ENST00000377833, ENST00000377823, | ENST00000293350, ENST00000540132, ENST00000455361, ENST00000433981, ENST00000598015, | |
Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 7 X 4 X 6=168 |
# samples | 2 | 7 | |
** MAII score | log2(2/8*10)=1.32192809488736 | log2(7/168*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: CUBN [Title/Abstract] AND ALDH16A1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | SKCM | TCGA-ER-A3EV-06A | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000377833 | ENST00000293350 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
5CDS-intron | ENST00000377833 | ENST00000540132 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
5CDS-intron | ENST00000377833 | ENST00000455361 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
5CDS-intron | ENST00000377833 | ENST00000433981 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
5CDS-3UTR | ENST00000377833 | ENST00000598015 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
intron-3CDS | ENST00000377823 | ENST00000293350 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
intron-intron | ENST00000377823 | ENST00000540132 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
intron-intron | ENST00000377823 | ENST00000455361 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
intron-intron | ENST00000377823 | ENST00000433981 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
intron-3UTR | ENST00000377823 | ENST00000598015 | CUBN | chr10 | 17024483 | - | ALDH16A1 | chr19 | 49961743 | + |
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FusionProtFeatures for CUBN_ALDH16A1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
CUBN | ALDH16A1 |
Cotransporter which plays a role in lipoprotein, vitaminand iron metabolism, by facilitating their uptake. Binds to ALB,MB, Kappa and lambda-light chains, TF, hemoglobin, GC, SCGB1A1,APOA1, high density lipoprotein, and the GIF-cobalamin complex.The binding of all ligands requires calcium. Serves as importanttransporter in several absorptive epithelia, including intestine,renal proximal tubules and embryonic yolk sac. Interaction withLRP2 mediates its trafficking throughout vesicles and facilitatesthe uptake of specific ligands like GC, hemoglobin, ALB, TF andSCGB1A1. Interaction with AMN controls its trafficking to theplasma membrane and facilitates endocytosis of ligands. May playan important role in the development of the peri-implantationembryo through internalization of APOA1 and cholesterol. Binds toLGALS3 at the maternal-fetal interface.{ECO:0000269|PubMed:10371504, ECO:0000269|PubMed:11606717,ECO:0000269|PubMed:11717447, ECO:0000269|PubMed:14576052,ECO:0000269|PubMed:9572993}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1048_1161 | 1565 | 3624 | Domain | CUB 6 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1165_1277 | 1565 | 3624 | Domain | CUB 7 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1278_1389 | 1565 | 3624 | Domain | CUB 8 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 132_168 | 1565 | 3624 | Domain | EGF-like 1 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1391_1506 | 1565 | 3624 | Domain | CUB 9 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 170_211 | 1565 | 3624 | Domain | EGF-like 2%3B calcium-binding |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 263_304 | 1565 | 3624 | Domain | EGF-like 3%3B calcium-binding |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 305_348 | 1565 | 3624 | Domain | EGF-like 4%3B calcium-binding |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 349_385 | 1565 | 3624 | Domain | EGF-like 5 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 395_430 | 1565 | 3624 | Domain | EGF-like 6 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 432_468 | 1565 | 3624 | Domain | EGF-like 7%3B calcium-binding |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 474_586 | 1565 | 3624 | Domain | CUB 1 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 590_702 | 1565 | 3624 | Domain | CUB 2 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 708_816 | 1565 | 3624 | Domain | CUB 3 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 816_928 | 1565 | 3624 | Domain | CUB 4 |
Hgene | CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 932_1042 | 1565 | 3624 | Domain | CUB 5 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1510_1619 | 1565 | 3624 | Domain | CUB 10 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1620_1734 | 1565 | 3624 | Domain | CUB 11 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1738_1850 | 1565 | 3624 | Domain | CUB 12 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1852_1963 | 1565 | 3624 | Domain | CUB 13 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 1978_2091 | 1565 | 3624 | Domain | CUB 14 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2092_2213 | 1565 | 3624 | Domain | CUB 15 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2217_2334 | 1565 | 3624 | Domain | CUB 16 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2336_2448 | 1565 | 3624 | Domain | CUB 17 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2452_2565 | 1565 | 3624 | Domain | CUB 18 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2570_2687 | 1565 | 3624 | Domain | CUB 19 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2689_2801 | 1565 | 3624 | Domain | CUB 20 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2805_2919 | 1565 | 3624 | Domain | CUB 21 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 2920_3035 | 1565 | 3624 | Domain | CUB 22 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 3037_3150 | 1565 | 3624 | Domain | CUB 23 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 3157_3274 | 1565 | 3624 | Domain | CUB 24 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 3278_3393 | 1565 | 3624 | Domain | CUB 25 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 3395_3507 | 1565 | 3624 | Domain | CUB 26 |
Hgene | >CUBN | chr10:17024483 | chr19:49961743 | ENST00000377833 | - | 31 | 67 | 3511_3623 | 1565 | 3624 | Domain | CUB 27 |
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FusionGeneSequence for CUBN_ALDH16A1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_CUBN_ENST00000377833_chr10_17024483_-_ALDH16A1_ENST00000293350_chr19_49961743_+_2338aa MMNMSLPFLWSLLTLLIFAEVNGEAGELELQRQKRSINLQQPRMATERGNLVFLTGSAQNIEFRTGSLGKIKLNDEDLSECLHQIQKNKE DIIELKGSAIGLPQNISSQIYQLNSKLVDLERKFQGLQQTVDKKVCSSNPCQNGGTCLNLHDSFFCICPPQWKGPLCSADVNECEIYSGT PLSCQNGGTCVNTMGSYSCHCPPETYGPQCASKYDDCEGGSVARCVHGICEDLMREQAGEPKYSCVCDAGWMFSPNSPACTLDRDECSFQ PGPCSTLVQCFNTQGSFYCGACPTGWQGNGYICEDINECEINNGGCSVAPPVECVNTPGSSHCQACPPGYQGDGRVCTLTDICSVSNGGC HPDASCSSTLGSLPLCTCLPGYTGNGYGPNGCVQLSNICLSHPCLNGQCIDTVSGYFCKCDSGWTGVNCTENINECLSNPCLNGGTCVDG VDSFSCECTRLWTGALCQVPQQVCGESLSGINGSFSYRSPDVGYVHDVNCFWVIKTEMGKVLRITFTFFRLESMDNCPHEFLQVYDGDSS SAFQLGRFCGSSLPHELLSSDNALYFHLYSEHLRNGRGFTVRWETQQPECGGILTGPYGSIKSPGYPGNYPPGRDCVWIVVTSPDLLVTF TFGTLSLEHHDDCNKDYLEIRDGPLYQDPLLGKFCTTFSVPPLQTTGPFARIHFHSDSQISDQGFHITYLTSPSDLRCGGNYTDPEGELF LPELSGPFTHTRQCVYMMKQPQGEQIQINFTHVELQCQSDSSQNYIEVRDGETLLGKVCGNGTISHIKSITNSVWIRFKIDASVEKASFR AVYQVACGDELTGEGVIRSPFFPNVYPGERTCRWTIHQPQSQVILLNFTVFEIGSSAHCETDYVEIGSSSILGSPENKKYCGTDIPSFIT SVYNFLYVTFVKSSSTENHGFMAKFSAEDLACGEILTESTGTIQSPGHPNVYPHGINCTWHILVQPNHLIHLMFETFHLEFHYNCTNDYL EVYDTDSETSLGRYCGKSIPPSLTSSGNSLMLVFVTDSDLAYEGFLINYEAISAATACLQDYTDDLGTFTSPNFPNNYPNNWECIYRITV RTGQLIAVHFTNFSLEEAIGNYYTDFLEIRDGGYEKSPLLGIFYGSNLPPTIISHSNKLWLKFKSDQIDTRSGFSAYWDGSSTGCGGNLT TSSGTFISPNYPMPYYHSSECYWWLKSSHGSAFELEFKDFHLEHHPNCTLDYLAVYDGPSSNSHLLTQLCGDEKPPLIRSSGDSMFIKLR TDEGQQGRGFKAEYRQTCENVVIVNQTYGILESIGYPNPYSENQHCNWTIRATTGNTVNYTFLAFDLEHHINCSTDYLELYDGPRQMGRY CGVDLPPPGSTTSSKLQVLLLTDGVGRREKGFQMQWFVYGCGGELSGATGSFSSPGFPNRYPPNKECIWYIRTDPGSSIQLTIHDFDVEY HSRCNFDVLEIYGGPDFHSPRIAQLCTQRSPENPMQVSSTGNELAIRFKTDLSINGRGFNASWQAVTGGCGGIFQAPSGEIHSPNYPSPY RSNTDCSWVIRVDRNHRVLLNFTDFDLEPQDSCIMAWLDTQDRCLGHYVNGKWLKPEHRNSVPCQDPITGENLASCLQAQAEDVAAAVEA ARMAFKGWSAHPGVVRAQHLTRLAEVIQKHQRLLWTLESLVTGRAVREVRDGDVQLAQQLLHYHAIQASTQEEALAGWEPMGVIGLILPP TFSFLEMMWRICPALAVGCTVVALVPPASPAPLLLAQLAGELGPFPGILNVLSGPASLVPILASQPGIRKVAFCGAPEEGRALRRSLAGE CAELGLALGTESLLLLTDTADVDSAVEGVVDAAWSDRGPGGLRLLIQESVWDEAMRRLQERMGRLRSGRGLDGAVDMGARGAAACDLVQR FVREAQSQGAQVFQAGDVPSERPFYPPTLVSNLPPASPCAQVEVPWPVVVASPFRTAKEALLVANGTPRGGSASVWSERLGQALELGYGL QVGTVWINAHGLRDPSVPTGGCKESGCSWHGGPDGLYEYLRPSGTPARLSCLSKNLNYDTFGLAVPSTLPAGPEIGPSPAPPYGLFVGGR FQAPGARSSRPIRDSSGNLHGYVAEGGAKDIRGAVEAAHQAFPGWAGQSPGARAALLWALAAALERRKSTLASRLERQGAELKAAEAEVE LSARRLRAWGARVQAQGHTLQVAGLRGPVLRLREPLGVLAVVCPDEWPLLAFVSLLAPALAYGNTVVMVPSAACPLLALEVCQDMATVFP |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_CUBN_ENST00000377833_chr10_17024483_-_ALDH16A1_ENST00000293350_chr19_49961743_+_7014nt ATGATGAACATGTCTTTACCTTTTCTTTGGAGTTTGCTTACCTTATTAATATTTGCTGAAGTAAATGGCGAAGCTGGAGAACTTGAGCTG CAGAGACAAAAAAGAAGCATCAATCTCCAACAGCCTCGAATGGCTACAGAGAGAGGAAATTTGGTGTTTCTTACGGGGTCTGCTCAAAAC ATTGAGTTTAGAACCGGATCCCTGGGAAAAATTAAATTAAATGATGAAGATCTCAGTGAGTGTTTACATCAGATCCAGAAAAACAAAGAA GATATTATAGAGTTAAAAGGGAGTGCAATTGGTCTGCCTCAAAATATATCTAGTCAAATCTATCAGCTTAATTCCAAGCTGGTGGATCTT GAGAGAAAATTCCAAGGCTTGCAGCAGACTGTTGACAAAAAGGTTTGCAGCAGCAATCCTTGCCAGAATGGTGGAACCTGCCTCAATCTG CATGATTCCTTTTTTTGTATCTGTCCCCCACAGTGGAAGGGTCCTCTCTGCTCAGCTGATGTTAACGAATGTGAGATTTACTCAGGAACA CCCTTGAGCTGCCAGAATGGAGGCACATGTGTTAATACAATGGGAAGTTACAGTTGTCACTGCCCACCTGAGACGTACGGACCCCAGTGT GCATCCAAATATGACGACTGTGAAGGGGGTTCTGTGGCACGCTGTGTCCATGGCATCTGTGAGGATTTAATGCGAGAGCAAGCTGGAGAG CCCAAGTACAGCTGCGTCTGTGATGCTGGGTGGATGTTTTCACCCAACAGCCCTGCCTGCACGCTGGACAGAGACGAGTGCAGCTTCCAG CCCGGGCCTTGCTCCACACTTGTGCAGTGTTTCAACACTCAAGGCTCTTTCTACTGTGGGGCCTGTCCAACAGGCTGGCAAGGCAATGGA TATATTTGCGAAGATATCAATGAATGTGAGATAAATAACGGCGGCTGTTCTGTGGCTCCACCCGTTGAGTGTGTGAATACACCTGGGTCT TCCCACTGCCAGGCCTGTCCACCAGGGTACCAGGGTGACGGAAGAGTGTGCACACTCACAGACATCTGCTCAGTCAGTAATGGAGGCTGC CACCCAGATGCCTCATGCTCCTCAACTCTAGGTTCCTTACCTCTCTGCACGTGTCTCCCGGGTTATACTGGAAATGGTTATGGGCCAAAT GGATGTGTGCAGCTCAGTAATATTTGCCTAAGTCACCCCTGTCTAAATGGACAATGCATCGACACTGTCTCTGGTTATTTTTGTAAGTGT GACTCAGGTTGGACAGGTGTCAACTGTACAGAAAACATCAATGAGTGTTTGAGCAACCCCTGTTTGAATGGAGGAACTTGTGTTGATGGC GTTGATTCTTTCAGTTGTGAATGCACACGTCTCTGGACTGGAGCTCTCTGTCAGGTTCCTCAGCAAGTTTGTGGAGAGTCCCTCTCAGGA ATAAATGGAAGCTTCAGCTACAGGAGCCCGGATGTTGGTTATGTTCATGATGTTAACTGCTTCTGGGTTATCAAAACTGAAATGGGAAAG GTCCTGCGTATCACTTTCACTTTTTTCCGGTTAGAATCCATGGACAACTGTCCACACGAGTTTCTTCAGGTTTATGATGGAGATTCCTCT TCTGCTTTTCAACTTGGAAGATTTTGTGGCTCCAGCCTCCCTCATGAACTCCTCAGCAGTGACAATGCTCTCTATTTTCATCTCTATTCT GAACATTTAAGAAATGGGAGAGGCTTTACAGTAAGATGGGAAACACAGCAACCAGAGTGTGGAGGTATCCTGACTGGTCCTTACGGTTCT ATTAAGTCTCCGGGGTATCCTGGAAACTATCCCCCAGGAAGAGATTGTGTCTGGATTGTTGTAACTAGTCCTGACCTCCTGGTAACATTT ACTTTTGGGACCTTGAGCCTCGAGCACCATGATGACTGCAACAAAGATTACCTTGAGATTCGAGATGGTCCTTTGTATCAGGACCCCCTT CTTGGGAAGTTCTGCACCACTTTCTCTGTCCCACCGCTCCAGACTACTGGCCCCTTTGCCAGAATTCACTTCCATTCAGACTCCCAGATT AGTGACCAAGGCTTCCATATCACCTACTTAACATCACCTTCGGATCTGCGTTGTGGTGGGAACTACACGGACCCAGAGGGTGAACTCTTC TTGCCTGAGTTGTCTGGGCCTTTCACTCACACCAGGCAATGCGTCTATATGATGAAGCAGCCCCAGGGAGAACAAATACAAATCAACTTC ACCCACGTGGAGCTGCAATGCCAGAGTGACAGTTCTCAGAATTACATTGAGGTTCGAGATGGTGAAACCTTACTTGGAAAAGTCTGTGGC AACGGAACCATCTCTCACATTAAATCCATTACTAATAGTGTCTGGATCAGGTTTAAAATAGATGCTTCTGTTGAAAAAGCTAGTTTCAGA GCTGTTTATCAAGTCGCTTGCGGGGATGAATTAACTGGAGAAGGGGTCATTCGCTCGCCTTTTTTTCCTAACGTGTATCCTGGAGAAAGA ACCTGTAGGTGGACCATCCACCAGCCCCAAAGCCAAGTCATTCTCCTCAACTTCACTGTCTTTGAAATTGGAAGTTCTGCCCACTGTGAA ACAGATTATGTTGAGATTGGTAGCAGTTCCATTTTGGGTTCTCCTGAAAATAAAAAGTATTGCGGTACAGACATACCTTCATTTATAACA TCTGTGTACAATTTTCTTTATGTCACATTCGTGAAAAGTTCTTCTACTGAAAACCATGGTTTCATGGCTAAGTTCAGTGCTGAGGATTTG GCATGTGGAGAAATTCTTACAGAATCAACAGGGACCATTCAAAGTCCTGGCCATCCAAATGTCTACCCCCACGGTATCAACTGTACTTGG CATATATTAGTCCAACCTAATCACCTGATTCATTTAATGTTCGAAACATTTCATCTGGAGTTTCATTACAATTGCACAAACGACTACTTG GAAGTTTATGACACCGACTCTGAGACATCCCTTGGAAGATACTGTGGAAAGTCGATCCCGCCATCTCTCACAAGCAGTGGTAACTCATTG ATGCTGGTGTTTGTGACTGACTCCGACCTCGCTTATGAAGGCTTCTTAATAAACTATGAAGCAATCAGTGCAGCAACAGCATGTTTGCAA GACTACACAGATGATTTGGGGACATTCACTTCTCCAAACTTCCCCAATAATTATCCCAACAACTGGGAATGCATTTATCGGATCACAGTG AGAACTGGCCAACTGATTGCAGTGCACTTCACAAACTTCTCCTTGGAGGAAGCCATTGGAAACTATTATACAGATTTTCTGGAAATCAGA GATGGAGGCTATGAAAAATCACCATTGCTGGGAATATTCTATGGCTCAAATCTACCCCCAACAATCATCTCTCATAGTAACAAACTATGG TTAAAATTTAAGAGTGACCAAATAGACACAAGGTCTGGATTCTCAGCTTACTGGGATGGGTCATCAACAGGTTGCGGGGGTAATCTCACC ACTTCAAGCGGCACGTTCATATCTCCCAACTACCCGATGCCCTATTACCACAGCTCTGAATGCTACTGGTGGTTGAAATCTAGCCACGGC AGCGCATTTGAACTGGAATTCAAAGACTTTCACTTGGAGCATCATCCAAACTGCACTTTAGATTACCTGGCTGTATATGATGGCCCAAGT AGCAACTCTCATCTGCTAACTCAGCTTTGTGGGGATGAGAAACCCCCTCTTATTCGTTCTAGTGGAGACAGCATGTTTATAAAACTGAGG ACAGATGAAGGTCAGCAAGGACGTGGCTTCAAGGCTGAATACCGGCAGACATGTGAGAATGTGGTAATAGTCAATCAAACCTATGGCATC TTAGAGAGTATAGGGTATCCGAATCCTTATTCTGAAAATCAGCATTGCAACTGGACCATCCGGGCAACAACAGGCAACACTGTGAACTAC ACATTTTTAGCATTTGACTTGGAACATCACATAAACTGCTCCACAGATTATTTAGAGCTCTATGATGGACCACGGCAGATGGGACGCTAC TGTGGAGTAGACCTGCCCCCTCCAGGGAGTACTACAAGCTCCAAGCTTCAAGTGCTGCTCCTTACAGATGGGGTTGGCCGCCGTGAGAAA GGATTTCAGATGCAGTGGTTTGTTTACGGTTGTGGTGGAGAGCTGTCTGGGGCCACAGGCTCCTTCAGCAGCCCCGGGTTCCCCAACAGG TATCCACCAAACAAGGAGTGTATCTGGTACATTAGGACGGACCCCGGGAGTAGCATTCAGCTCACCATCCATGACTTCGATGTGGAGTAT CATTCAAGGTGCAACTTTGATGTCTTGGAGATCTATGGAGGCCCCGATTTCCACTCTCCCAGAATAGCCCAACTGTGTACCCAGAGATCA CCTGAGAACCCCATGCAGGTCTCCAGCACTGGAAATGAGCTAGCAATTCGATTCAAGACCGACTTGTCCATAAATGGGAGAGGCTTCAAT GCGTCATGGCAAGCAGTCACTGGAGGTTGTGGTGGGATTTTCCAGGCTCCCAGTGGAGAGATTCATTCTCCAAATTACCCCAGTCCTTAT AGGAGCAACACAGACTGTTCTTGGGTCATTCGGGTTGACAGAAATCATCGTGTTCTCTTGAACTTCACTGACTTTGATCTTGAACCACAA GACTCTTGTATTATGGCCTGGCTGGACACCCAGGACCGGTGCTTGGGCCACTATGTGAATGGGAAGTGGTTAAAGCCTGAACACAGAAAT TCAGTGCCTTGCCAGGATCCCATCACAGGAGAGAACTTGGCCAGTTGCCTGCAGGCACAGGCCGAGGATGTGGCTGCAGCCGTGGAGGCA GCCAGGATGGCATTTAAGGGCTGGAGTGCGCACCCCGGCGTCGTCCGGGCCCAGCACCTGACCAGGCTGGCCGAGGTGATCCAGAAGCAC CAGCGGCTGCTGTGGACCCTGGAATCCCTGGTGACTGGGCGGGCTGTTCGAGAGGTTCGAGACGGGGACGTCCAGCTGGCCCAGCAGCTG CTCCACTACCATGCAATCCAGGCATCCACCCAGGAGGAGGCACTGGCAGGCTGGGAGCCCATGGGAGTAATTGGCCTCATCCTGCCACCC ACATTCTCCTTCCTTGAGATGATGTGGAGGATTTGCCCTGCCCTGGCTGTGGGCTGCACCGTGGTGGCCCTCGTGCCCCCGGCCTCCCCG GCGCCCCTCCTCCTGGCCCAGCTGGCGGGGGAGCTGGGCCCCTTCCCGGGAATCCTGAATGTCCTCAGTGGCCCTGCGTCCCTGGTGCCC ATCCTGGCCTCCCAGCCTGGAATCCGGAAGGTGGCCTTCTGCGGAGCCCCGGAGGAAGGGCGTGCCCTTCGACGGAGCCTGGCGGGAGAG TGTGCGGAGCTGGGCCTGGCGCTGGGGACGGAGTCGCTGCTGCTGCTGACGGACACGGCGGACGTAGACTCGGCCGTGGAGGGTGTCGTG GACGCCGCCTGGTCCGACCGCGGCCCGGGTGGCCTCAGGCTCCTCATCCAGGAGTCTGTGTGGGATGAAGCCATGAGACGGCTGCAGGAG CGGATGGGGCGGCTTCGGAGTGGCCGAGGGCTGGATGGGGCCGTGGACATGGGGGCCCGGGGGGCTGCCGCATGTGACCTGGTCCAGCGC TTTGTGCGTGAGGCCCAGAGCCAGGGTGCACAGGTGTTCCAGGCTGGTGATGTGCCTTCGGAACGCCCATTCTATCCCCCAACCTTGGTC TCCAACCTGCCCCCAGCCTCCCCATGTGCCCAGGTGGAGGTGCCGTGGCCTGTGGTCGTGGCCTCCCCCTTCCGCACAGCCAAGGAGGCA CTGTTGGTGGCCAACGGGACGCCCCGCGGGGGCAGCGCCAGTGTGTGGAGCGAGAGGCTGGGGCAGGCGCTGGAGCTGGGCTATGGGCTC CAGGTGGGCACTGTCTGGATCAACGCCCACGGCCTCAGAGACCCTTCGGTGCCCACAGGCGGCTGCAAGGAGAGTGGGTGTTCCTGGCAC GGGGGCCCAGACGGGCTGTATGAGTATCTGCGGCCCTCAGGGACCCCTGCCCGGCTGTCCTGCCTCTCCAAGAACCTGAACTATGACACC TTTGGCCTCGCTGTTCCCTCAACCCTGCCGGCTGGGCCTGAAATAGGGCCCAGCCCAGCACCCCCCTATGGGCTCTTCGTTGGGGGCCGT TTCCAGGCTCCTGGGGCCCGAAGCTCCAGGCCCATCCGGGATTCGTCTGGCAACCTCCATGGCTACGTGGCTGAGGGTGGAGCCAAGGAC ATCCGAGGTGCTGTGGAGGCCGCTCACCAGGCTTTCCCTGGCTGGGCGGGCCAGTCCCCAGGAGCCCGGGCAGCCCTGCTGTGGGCCCTG GCGGCTGCACTGGAGCGCCGGAAGTCTACCCTGGCCTCGAGGCTGGAGAGGCAGGGAGCGGAGCTCAAGGCTGCGGAGGCGGAGGTGGAG CTGAGCGCAAGACGACTTCGGGCGTGGGGGGCCCGGGTGCAGGCCCAAGGCCACACCCTGCAGGTAGCCGGGCTGAGAGGCCCTGTGCTG CGCCTGCGGGAGCCGCTGGGTGTGCTGGCTGTGGTGTGTCCGGACGAGTGGCCCCTGCTTGCCTTCGTGTCCCTGCTGGCTCCCGCCCTG GCCTACGGCAACACTGTGGTCATGGTGCCCAGTGCGGCCTGTCCTCTGCTGGCCCTGGAGGTCTGCCAGGACATGGCCACCGTGTTCCCA GCAGGCCTGGCCAACGTGGTGACAGGAGACCGGGACCATCTGACCCGCTGCCTGGCCTTGCACCAAGACGTCCAGGCCATGTGGTATTTC GGATCAGCCCAGGGTTCCCAGTTTGTCGAGTGGGCCTCGGCAGGAAACCTCAAACCGGTGTGGGCGAGCAGGGGCTGCCCGCGGGCCTGG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_CUBN_ENST00000377833_chr10_17024483_-_ALDH16A1_ENST00000293350_chr19_49961743_+_7661nt TTCTCCAAAATCCCATGCTCAGTTGGTTGGAGTGGCCTCACTCTTACCTGCCAACCTGGGAGGTTGATGATGAACATGTCTTTACCTTTT CTTTGGAGTTTGCTTACCTTATTAATATTTGCTGAAGTAAATGGCGAAGCTGGAGAACTTGAGCTGCAGAGACAAAAAAGAAGCATCAAT CTCCAACAGCCTCGAATGGCTACAGAGAGAGGAAATTTGGTGTTTCTTACGGGGTCTGCTCAAAACATTGAGTTTAGAACCGGATCCCTG GGAAAAATTAAATTAAATGATGAAGATCTCAGTGAGTGTTTACATCAGATCCAGAAAAACAAAGAAGATATTATAGAGTTAAAAGGGAGT GCAATTGGTCTGCCTCAAAATATATCTAGTCAAATCTATCAGCTTAATTCCAAGCTGGTGGATCTTGAGAGAAAATTCCAAGGCTTGCAG CAGACTGTTGACAAAAAGGTTTGCAGCAGCAATCCTTGCCAGAATGGTGGAACCTGCCTCAATCTGCATGATTCCTTTTTTTGTATCTGT CCCCCACAGTGGAAGGGTCCTCTCTGCTCAGCTGATGTTAACGAATGTGAGATTTACTCAGGAACACCCTTGAGCTGCCAGAATGGAGGC ACATGTGTTAATACAATGGGAAGTTACAGTTGTCACTGCCCACCTGAGACGTACGGACCCCAGTGTGCATCCAAATATGACGACTGTGAA GGGGGTTCTGTGGCACGCTGTGTCCATGGCATCTGTGAGGATTTAATGCGAGAGCAAGCTGGAGAGCCCAAGTACAGCTGCGTCTGTGAT GCTGGGTGGATGTTTTCACCCAACAGCCCTGCCTGCACGCTGGACAGAGACGAGTGCAGCTTCCAGCCCGGGCCTTGCTCCACACTTGTG CAGTGTTTCAACACTCAAGGCTCTTTCTACTGTGGGGCCTGTCCAACAGGCTGGCAAGGCAATGGATATATTTGCGAAGATATCAATGAA TGTGAGATAAATAACGGCGGCTGTTCTGTGGCTCCACCCGTTGAGTGTGTGAATACACCTGGGTCTTCCCACTGCCAGGCCTGTCCACCA GGGTACCAGGGTGACGGAAGAGTGTGCACACTCACAGACATCTGCTCAGTCAGTAATGGAGGCTGCCACCCAGATGCCTCATGCTCCTCA ACTCTAGGTTCCTTACCTCTCTGCACGTGTCTCCCGGGTTATACTGGAAATGGTTATGGGCCAAATGGATGTGTGCAGCTCAGTAATATT TGCCTAAGTCACCCCTGTCTAAATGGACAATGCATCGACACTGTCTCTGGTTATTTTTGTAAGTGTGACTCAGGTTGGACAGGTGTCAAC TGTACAGAAAACATCAATGAGTGTTTGAGCAACCCCTGTTTGAATGGAGGAACTTGTGTTGATGGCGTTGATTCTTTCAGTTGTGAATGC ACACGTCTCTGGACTGGAGCTCTCTGTCAGGTTCCTCAGCAAGTTTGTGGAGAGTCCCTCTCAGGAATAAATGGAAGCTTCAGCTACAGG AGCCCGGATGTTGGTTATGTTCATGATGTTAACTGCTTCTGGGTTATCAAAACTGAAATGGGAAAGGTCCTGCGTATCACTTTCACTTTT TTCCGGTTAGAATCCATGGACAACTGTCCACACGAGTTTCTTCAGGTTTATGATGGAGATTCCTCTTCTGCTTTTCAACTTGGAAGATTT TGTGGCTCCAGCCTCCCTCATGAACTCCTCAGCAGTGACAATGCTCTCTATTTTCATCTCTATTCTGAACATTTAAGAAATGGGAGAGGC TTTACAGTAAGATGGGAAACACAGCAACCAGAGTGTGGAGGTATCCTGACTGGTCCTTACGGTTCTATTAAGTCTCCGGGGTATCCTGGA AACTATCCCCCAGGAAGAGATTGTGTCTGGATTGTTGTAACTAGTCCTGACCTCCTGGTAACATTTACTTTTGGGACCTTGAGCCTCGAG CACCATGATGACTGCAACAAAGATTACCTTGAGATTCGAGATGGTCCTTTGTATCAGGACCCCCTTCTTGGGAAGTTCTGCACCACTTTC TCTGTCCCACCGCTCCAGACTACTGGCCCCTTTGCCAGAATTCACTTCCATTCAGACTCCCAGATTAGTGACCAAGGCTTCCATATCACC TACTTAACATCACCTTCGGATCTGCGTTGTGGTGGGAACTACACGGACCCAGAGGGTGAACTCTTCTTGCCTGAGTTGTCTGGGCCTTTC ACTCACACCAGGCAATGCGTCTATATGATGAAGCAGCCCCAGGGAGAACAAATACAAATCAACTTCACCCACGTGGAGCTGCAATGCCAG AGTGACAGTTCTCAGAATTACATTGAGGTTCGAGATGGTGAAACCTTACTTGGAAAAGTCTGTGGCAACGGAACCATCTCTCACATTAAA TCCATTACTAATAGTGTCTGGATCAGGTTTAAAATAGATGCTTCTGTTGAAAAAGCTAGTTTCAGAGCTGTTTATCAAGTCGCTTGCGGG GATGAATTAACTGGAGAAGGGGTCATTCGCTCGCCTTTTTTTCCTAACGTGTATCCTGGAGAAAGAACCTGTAGGTGGACCATCCACCAG CCCCAAAGCCAAGTCATTCTCCTCAACTTCACTGTCTTTGAAATTGGAAGTTCTGCCCACTGTGAAACAGATTATGTTGAGATTGGTAGC AGTTCCATTTTGGGTTCTCCTGAAAATAAAAAGTATTGCGGTACAGACATACCTTCATTTATAACATCTGTGTACAATTTTCTTTATGTC ACATTCGTGAAAAGTTCTTCTACTGAAAACCATGGTTTCATGGCTAAGTTCAGTGCTGAGGATTTGGCATGTGGAGAAATTCTTACAGAA TCAACAGGGACCATTCAAAGTCCTGGCCATCCAAATGTCTACCCCCACGGTATCAACTGTACTTGGCATATATTAGTCCAACCTAATCAC CTGATTCATTTAATGTTCGAAACATTTCATCTGGAGTTTCATTACAATTGCACAAACGACTACTTGGAAGTTTATGACACCGACTCTGAG ACATCCCTTGGAAGATACTGTGGAAAGTCGATCCCGCCATCTCTCACAAGCAGTGGTAACTCATTGATGCTGGTGTTTGTGACTGACTCC GACCTCGCTTATGAAGGCTTCTTAATAAACTATGAAGCAATCAGTGCAGCAACAGCATGTTTGCAAGACTACACAGATGATTTGGGGACA TTCACTTCTCCAAACTTCCCCAATAATTATCCCAACAACTGGGAATGCATTTATCGGATCACAGTGAGAACTGGCCAACTGATTGCAGTG CACTTCACAAACTTCTCCTTGGAGGAAGCCATTGGAAACTATTATACAGATTTTCTGGAAATCAGAGATGGAGGCTATGAAAAATCACCA TTGCTGGGAATATTCTATGGCTCAAATCTACCCCCAACAATCATCTCTCATAGTAACAAACTATGGTTAAAATTTAAGAGTGACCAAATA GACACAAGGTCTGGATTCTCAGCTTACTGGGATGGGTCATCAACAGGTTGCGGGGGTAATCTCACCACTTCAAGCGGCACGTTCATATCT CCCAACTACCCGATGCCCTATTACCACAGCTCTGAATGCTACTGGTGGTTGAAATCTAGCCACGGCAGCGCATTTGAACTGGAATTCAAA GACTTTCACTTGGAGCATCATCCAAACTGCACTTTAGATTACCTGGCTGTATATGATGGCCCAAGTAGCAACTCTCATCTGCTAACTCAG CTTTGTGGGGATGAGAAACCCCCTCTTATTCGTTCTAGTGGAGACAGCATGTTTATAAAACTGAGGACAGATGAAGGTCAGCAAGGACGT GGCTTCAAGGCTGAATACCGGCAGACATGTGAGAATGTGGTAATAGTCAATCAAACCTATGGCATCTTAGAGAGTATAGGGTATCCGAAT CCTTATTCTGAAAATCAGCATTGCAACTGGACCATCCGGGCAACAACAGGCAACACTGTGAACTACACATTTTTAGCATTTGACTTGGAA CATCACATAAACTGCTCCACAGATTATTTAGAGCTCTATGATGGACCACGGCAGATGGGACGCTACTGTGGAGTAGACCTGCCCCCTCCA GGGAGTACTACAAGCTCCAAGCTTCAAGTGCTGCTCCTTACAGATGGGGTTGGCCGCCGTGAGAAAGGATTTCAGATGCAGTGGTTTGTT TACGGTTGTGGTGGAGAGCTGTCTGGGGCCACAGGCTCCTTCAGCAGCCCCGGGTTCCCCAACAGGTATCCACCAAACAAGGAGTGTATC TGGTACATTAGGACGGACCCCGGGAGTAGCATTCAGCTCACCATCCATGACTTCGATGTGGAGTATCATTCAAGGTGCAACTTTGATGTC TTGGAGATCTATGGAGGCCCCGATTTCCACTCTCCCAGAATAGCCCAACTGTGTACCCAGAGATCACCTGAGAACCCCATGCAGGTCTCC AGCACTGGAAATGAGCTAGCAATTCGATTCAAGACCGACTTGTCCATAAATGGGAGAGGCTTCAATGCGTCATGGCAAGCAGTCACTGGA GGTTGTGGTGGGATTTTCCAGGCTCCCAGTGGAGAGATTCATTCTCCAAATTACCCCAGTCCTTATAGGAGCAACACAGACTGTTCTTGG GTCATTCGGGTTGACAGAAATCATCGTGTTCTCTTGAACTTCACTGACTTTGATCTTGAACCACAAGACTCTTGTATTATGGCCTGGCTG GACACCCAGGACCGGTGCTTGGGCCACTATGTGAATGGGAAGTGGTTAAAGCCTGAACACAGAAATTCAGTGCCTTGCCAGGATCCCATC ACAGGAGAGAACTTGGCCAGTTGCCTGCAGGCACAGGCCGAGGATGTGGCTGCAGCCGTGGAGGCAGCCAGGATGGCATTTAAGGGCTGG AGTGCGCACCCCGGCGTCGTCCGGGCCCAGCACCTGACCAGGCTGGCCGAGGTGATCCAGAAGCACCAGCGGCTGCTGTGGACCCTGGAA TCCCTGGTGACTGGGCGGGCTGTTCGAGAGGTTCGAGACGGGGACGTCCAGCTGGCCCAGCAGCTGCTCCACTACCATGCAATCCAGGCA TCCACCCAGGAGGAGGCACTGGCAGGCTGGGAGCCCATGGGAGTAATTGGCCTCATCCTGCCACCCACATTCTCCTTCCTTGAGATGATG TGGAGGATTTGCCCTGCCCTGGCTGTGGGCTGCACCGTGGTGGCCCTCGTGCCCCCGGCCTCCCCGGCGCCCCTCCTCCTGGCCCAGCTG GCGGGGGAGCTGGGCCCCTTCCCGGGAATCCTGAATGTCCTCAGTGGCCCTGCGTCCCTGGTGCCCATCCTGGCCTCCCAGCCTGGAATC CGGAAGGTGGCCTTCTGCGGAGCCCCGGAGGAAGGGCGTGCCCTTCGACGGAGCCTGGCGGGAGAGTGTGCGGAGCTGGGCCTGGCGCTG GGGACGGAGTCGCTGCTGCTGCTGACGGACACGGCGGACGTAGACTCGGCCGTGGAGGGTGTCGTGGACGCCGCCTGGTCCGACCGCGGC CCGGGTGGCCTCAGGCTCCTCATCCAGGAGTCTGTGTGGGATGAAGCCATGAGACGGCTGCAGGAGCGGATGGGGCGGCTTCGGAGTGGC CGAGGGCTGGATGGGGCCGTGGACATGGGGGCCCGGGGGGCTGCCGCATGTGACCTGGTCCAGCGCTTTGTGCGTGAGGCCCAGAGCCAG GGTGCACAGGTGTTCCAGGCTGGTGATGTGCCTTCGGAACGCCCATTCTATCCCCCAACCTTGGTCTCCAACCTGCCCCCAGCCTCCCCA TGTGCCCAGGTGGAGGTGCCGTGGCCTGTGGTCGTGGCCTCCCCCTTCCGCACAGCCAAGGAGGCACTGTTGGTGGCCAACGGGACGCCC CGCGGGGGCAGCGCCAGTGTGTGGAGCGAGAGGCTGGGGCAGGCGCTGGAGCTGGGCTATGGGCTCCAGGTGGGCACTGTCTGGATCAAC GCCCACGGCCTCAGAGACCCTTCGGTGCCCACAGGCGGCTGCAAGGAGAGTGGGTGTTCCTGGCACGGGGGCCCAGACGGGCTGTATGAG TATCTGCGGCCCTCAGGGACCCCTGCCCGGCTGTCCTGCCTCTCCAAGAACCTGAACTATGACACCTTTGGCCTCGCTGTTCCCTCAACC CTGCCGGCTGGGCCTGAAATAGGGCCCAGCCCAGCACCCCCCTATGGGCTCTTCGTTGGGGGCCGTTTCCAGGCTCCTGGGGCCCGAAGC TCCAGGCCCATCCGGGATTCGTCTGGCAACCTCCATGGCTACGTGGCTGAGGGTGGAGCCAAGGACATCCGAGGTGCTGTGGAGGCCGCT CACCAGGCTTTCCCTGGCTGGGCGGGCCAGTCCCCAGGAGCCCGGGCAGCCCTGCTGTGGGCCCTGGCGGCTGCACTGGAGCGCCGGAAG TCTACCCTGGCCTCGAGGCTGGAGAGGCAGGGAGCGGAGCTCAAGGCTGCGGAGGCGGAGGTGGAGCTGAGCGCAAGACGACTTCGGGCG TGGGGGGCCCGGGTGCAGGCCCAAGGCCACACCCTGCAGGTAGCCGGGCTGAGAGGCCCTGTGCTGCGCCTGCGGGAGCCGCTGGGTGTG CTGGCTGTGGTGTGTCCGGACGAGTGGCCCCTGCTTGCCTTCGTGTCCCTGCTGGCTCCCGCCCTGGCCTACGGCAACACTGTGGTCATG GTGCCCAGTGCGGCCTGTCCTCTGCTGGCCCTGGAGGTCTGCCAGGACATGGCCACCGTGTTCCCAGCAGGCCTGGCCAACGTGGTGACA GGAGACCGGGACCATCTGACCCGCTGCCTGGCCTTGCACCAAGACGTCCAGGCCATGTGGTATTTCGGATCAGCCCAGGGTTCCCAGTTT GTCGAGTGGGCCTCGGCAGGAAACCTCAAACCGGTGTGGGCGAGCAGGGGCTGCCCGCGGGCCTGGGACCAGGAGGCCGAGGGGGCAGGC CCAGAGCTGGGGCTGCGAGTGGCGCGGACCAAGGCCCTGTGGCTGCCTATGGGGGACTGATGCCTGAGCGCCACCTACTGCATTTTGGAC ACCTCACACCAAGGGGAGATGCACCCCACAGACACCTGGGACTTTCCCCTTCTGGTTCCTGTGTCTCCCAATAAACTCTCTGACCAACCC TAGCTGTGCTTCTGCGAGAAGAAAGGGTGTAGCAACTTCTGGCAGATATGAGGCTTTTTTCTTTTTTTTTTTTTTTTTTGAGACAACGTC TGGCTCTGTCACCCAGGCTGGAGCGCAGTGGCACAATCTCGGCCCACTGCAGCCTCGACCTCTGGGGCTCAAGGGATCCTCATGCCTCAG CCTCATATGTAGCTGGGGCCACAGACATGCACCACCACACCTGGCTCGAGGCCATTTTAGTTCTGAGGTTGAGCAGCTCAGGAGCCGGCT CCAGCACGGTGCTGTGTTTGTGAAACAGAGAAAGGGGACCCCCGAGGACCCCAGACAGGGCCTTAGGACTCTCATATCTTCTTGTCTTCT CCATCTGGTGGCTCTTGCTCTCTGGTTTTCTCTACCTTTTCATGGCCCCAGAATCCATATGCAGTAAAGGAACTCTCTGGAATAAAATTA |
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FusionGenePPI for CUBN_ALDH16A1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
CUBN | GC, GIF, SCGB1A1, RRP1B, CUBN, CBL, LRP1, PID1, BRCA1 | ALDH16A1 | PAAF1, USP1, DERA, KHSRP, MEA1, PURB, MDM2, FAS, LANCL1, PCMT1, OLFM4, NTRK1, ATIC, PFKP, UGP2, UMPS, TLR1, ERP29, FAM117B, ADD2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CUBN_ALDH16A1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Hgene | CUBN | O60494 | DB00200 | Hydroxocobalamin | Cubilin | small molecule | approved |
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RelatedDiseases for CUBN_ALDH16A1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | CUBN | C0025202 | melanoma | 1 | CTD_human |
Hgene | CUBN | C0236733 | Amphetamine-Related Disorders | 1 | CTD_human |
Hgene | CUBN | C1306856 | Megaloblastic anemia due to inborn errors of metabolism | 1 | CTD_human;ORPHANET;UNIPROT |
Tgene | ALDH16A1 | C0018099 | Gout | 1 | CTD_human |
Tgene | ALDH16A1 | C0268117 | Gout, HPRT-Related | 1 | CTD_human |
Tgene | ALDH16A1 | C0740394 | Hyperuricemia | 1 | CTD_human |