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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 8661

FusionGeneSummary for CSNK1G3_CSNK1G3

check button Fusion gene summary
Fusion gene informationFusion gene name: CSNK1G3_CSNK1G3
Fusion gene ID: 8661
HgeneTgene
Gene symbol

CSNK1G3

CSNK1G3

Gene ID

1456

1456

Gene namecasein kinase 1 gamma 3casein kinase 1 gamma 3
SynonymsCKI-gamma 3|CSNK1G3LCKI-gamma 3|CSNK1G3L
Cytomap

5q23.2

5q23.2

Type of geneprotein-codingprotein-coding
Descriptioncasein kinase I isoform gamma-3casein kinase Icasein kinase I isoform gamma-3casein kinase I
Modification date2018052320180523
UniProtAcc

Q9Y6M4

Q9Y6M4

Ensembl transtripts involved in fusion geneENST00000395412, ENST00000345990, 
ENST00000395411, ENST00000511130, 
ENST00000512718, ENST00000521364, 
ENST00000510842, ENST00000361991, 
ENST00000360683, ENST00000508708, 
ENST00000395412, ENST00000345990, 
ENST00000395411, ENST00000511130, 
ENST00000512718, ENST00000521364, 
ENST00000510842, ENST00000361991, 
ENST00000360683, ENST00000508708, 
Fusion gene scores* DoF score2 X 2 X 1=43 X 2 X 3=18
# samples 23
** MAII scorelog2(2/4*10)=2.32192809488736log2(3/18*10)=0.736965594166206
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: CSNK1G3 [Title/Abstract] AND CSNK1G3 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCSNK1G3

GO:0018105

peptidyl-serine phosphorylation

25500533

TgeneCSNK1G3

GO:0018105

peptidyl-serine phosphorylation

25500533


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1AW582006CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-5UTRENST00000395412ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000395412ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000395412ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395412ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395412ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395412ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395412ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395412ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395412ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000395412ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000345990ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000345990ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000345990ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000345990ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000345990ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000345990ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000345990ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000345990ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000345990ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000345990ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000395411ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000395411ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000395411ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395411ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395411ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395411ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395411ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395411ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000395411ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000395411ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-5UTRENST00000511130ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-5UTRENST00000511130ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-5UTRENST00000511130ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000511130ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000511130ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000511130ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000511130ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000511130ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000511130ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-3UTRENST00000511130ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000512718ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000512718ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000512718ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000512718ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000512718ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000512718ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000512718ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000512718ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000512718ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000512718ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000521364ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000521364ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000521364ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000521364ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000521364ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000521364ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000521364ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000521364ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000521364ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000521364ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000510842ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000510842ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000510842ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000510842ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000510842ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000510842ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000510842ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000510842ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000510842ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000510842ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000361991ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000361991ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000361991ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000361991ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000361991ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000361991ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000361991ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000361991ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000361991ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000361991ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000360683ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000360683ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-5UTRENST00000360683ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000360683ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000360683ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000360683ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000360683ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000360683ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-intronENST00000360683ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
5CDS-3UTRENST00000360683ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-5UTRENST00000508708ENST00000395412CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-5UTRENST00000508708ENST00000345990CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-5UTRENST00000508708ENST00000395411CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000508708ENST00000511130CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000508708ENST00000512718CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000508708ENST00000521364CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000508708ENST00000510842CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000508708ENST00000361991CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-intronENST00000508708ENST00000360683CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+
intron-3UTRENST00000508708ENST00000508708CSNK1G3chr5

122893258

+CSNK1G3chr5

122881109

+

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FusionProtFeatures for CSNK1G3_CSNK1G3


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CSNK1G3

Q9Y6M4

CSNK1G3

Q9Y6M4

Serine/threonine-protein kinase. Casein kinases areoperationally defined by their preferential utilization of acidicproteins such as caseins as substrates. It can phosphorylate alarge number of proteins. Participates in Wnt signaling. Regulatesfast synaptic transmission mediated by glutamate (By similarity).{ECO:0000250}. Serine/threonine-protein kinase. Casein kinases areoperationally defined by their preferential utilization of acidicproteins such as caseins as substrates. It can phosphorylate alarge number of proteins. Participates in Wnt signaling. Regulatesfast synaptic transmission mediated by glutamate (By similarity).{ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for CSNK1G3_CSNK1G3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for CSNK1G3_CSNK1G3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
CSNK1G3NSF, ELAVL1, DBNDD2, PPP1R14A, CSNK1G3, SLC25A41, TSPAN3, RD3, SYNPO, LIMA1, UBXN7, CSNK1G2, CSNK1G1, ANKRD13D, SDC1, S1PR2, GPR156, CYP2S1, GJB7, RNF11, MRAP2, MED21, ANKRD13A, SERHL2, ISG20, MRPL34, UBB, PROSER2, TPCN2, DUSP22, ARRDC3, SLC37A3, TUBB, CACNG5, TRIM25CSNK1G3NSF, ELAVL1, DBNDD2, PPP1R14A, CSNK1G3, SLC25A41, TSPAN3, RD3, SYNPO, LIMA1, UBXN7, CSNK1G2, CSNK1G1, ANKRD13D, SDC1, S1PR2, GPR156, CYP2S1, GJB7, RNF11, MRAP2, MED21, ANKRD13A, SERHL2, ISG20, MRPL34, UBB, PROSER2, TPCN2, DUSP22, ARRDC3, SLC37A3, TUBB, CACNG5, TRIM25


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for CSNK1G3_CSNK1G3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CSNK1G3_CSNK1G3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource