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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 8139

FusionGeneSummary for CORO2B_SLC22A23

check button Fusion gene summary
Fusion gene informationFusion gene name: CORO2B_SLC22A23
Fusion gene ID: 8139
HgeneTgene
Gene symbol

CORO2B

SLC22A23

Gene ID

10391

63027

Gene namecoronin 2Bsolute carrier family 22 member 23
SynonymsCLIPINCC6orf85
Cytomap

15q23

6p25.2

Type of geneprotein-codingprotein-coding
Descriptioncoronin-2Bclipin Ccoronin, actin binding protein, 2Bcoronin-like protein Csolute carrier family 22 member 23ion transporter protein
Modification date2018051920180522
UniProtAcc

Q9UQ03

A1A5C7

Ensembl transtripts involved in fusion geneENST00000261861, ENST00000566799, 
ENST00000540068, ENST00000543950, 
ENST00000436008, ENST00000406686, 
ENST00000380302, ENST00000490273, 
ENST00000380298, ENST00000433689, 
Fusion gene scores* DoF score2 X 2 X 2=84 X 3 X 4=48
# samples 24
** MAII scorelog2(2/8*10)=1.32192809488736log2(4/48*10)=-0.263034405833794
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: CORO2B [Title/Abstract] AND SLC22A23 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVSKCMTCGA-YD-A89C-06ACORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000261861ENST00000436008CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5UTR-3CDSENST00000261861ENST00000406686CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5UTR-5UTRENST00000261861ENST00000380302CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5UTR-5UTRENST00000261861ENST00000490273CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5UTR-5UTRENST00000261861ENST00000380298CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5UTR-intronENST00000261861ENST00000433689CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
In-frameENST00000566799ENST00000436008CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
In-frameENST00000566799ENST00000406686CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5CDS-5UTRENST00000566799ENST00000380302CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5CDS-5UTRENST00000566799ENST00000490273CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5CDS-5UTRENST00000566799ENST00000380298CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
5CDS-intronENST00000566799ENST00000433689CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-3CDSENST00000540068ENST00000436008CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-3CDSENST00000540068ENST00000406686CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-5UTRENST00000540068ENST00000380302CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-5UTRENST00000540068ENST00000490273CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-5UTRENST00000540068ENST00000380298CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-intronENST00000540068ENST00000433689CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-3CDSENST00000543950ENST00000436008CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-3CDSENST00000543950ENST00000406686CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-5UTRENST00000543950ENST00000380302CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-5UTRENST00000543950ENST00000490273CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-5UTRENST00000543950ENST00000380298CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-
intron-intronENST00000543950ENST00000433689CORO2Bchr15

68871616

+SLC22A23chr6

3416089

-

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FusionProtFeatures for CORO2B_SLC22A23


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CORO2B

Q9UQ03

SLC22A23

A1A5C7

May play a role in the reorganization of neuronal actinstructure.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for CORO2B_SLC22A23


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_CORO2B_ENST00000566799_chr15_68871616_+_SLC22A23_ENST00000436008_chr6_3416089_-_482aa
MTVTKWDLVCDNAWKVHIAKFSLLVGLIFGYLITGCIADWVGRRPVLLFSIIFILIFGLTVALSVNVTMFSTLRFFEGFCLAGIILTLYA
LRIELCPPGKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALIICPFLLMLLYWSIFPESLRWLMATQQFESAKRLILHFTQKNRMN
PEGDIKGVIPELEKELSRRPKKVCIVKVVGTRNLWKNIVVLCVNSLTGYGIHHCFARSMMGHEVKVPLLENFYADYYTTASIALVSCLAM
CVVVRFLGRRGGLLLFMILTALASLLQLGLLNLIGKYSQHPDSELQLKLAVGMSDSVKDKFSIAFSIVGMFASHAVGSLSVFFCAEITPT
VIRCGGLGLVLASAGFGMLTAPIIELHNQKGYFLHHIIFACCTLICIICILLLPESRDQNLPENISNGEHYTRQPLLPHKKGEQPLLLTN

>In-frame_CORO2B_ENST00000566799_chr15_68871616_+_SLC22A23_ENST00000406686_chr6_3416089_-_474aa
MTVTKWDLVCDNAWKVHIAKFSLLVGLIFGYLITGCIADWVGRRPVLLFSIIFILIFGLTVALSVNVTMFSTLRFFEGFCLAGIILTLYA
LRIELCPPGKRFMITMVASFVAMAGQFLMPGLAALCRDWQVLQALIICPFLLMLLYWSIFPESLRWLMATQQFESAKRLILHFTQKNRMN
PEGDIKGVIPELEKELSRRPKKVCIVKVVGTRNLWKNIVVLCVNSLTGYGIHHCFARSMMGHEVKVPLLENFYADYYTTASIALVSCLAM
CVVVRFLGRRGGLLLFMILTALASLLQLGLLNLIGKYSQHPDSGMSDSVKDKFSIAFSIVGMFASHAVGSLSVFFCAEITPTVIRCGGLG
LVLASAGFGMLTAPIIELHNQKGYFLHHIIFACCTLICIICILLLPESRDQNLPENISNGEHYTRQPLLPHKKGEQPLLLTNAELKDYSG


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_CORO2B_ENST00000566799_chr15_68871616_+_SLC22A23_ENST00000436008_chr6_3416089_-_1446nt
ATGACTGTCACAAAGTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTTTGGC
TACCTAATAACTGGATGCATTGCTGACTGGGTCGGCCGGCGGCCTGTGCTGCTGTTTTCCATCATCTTCATTCTGATCTTTGGACTGACT
GTGGCACTGTCAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATTCTCACCTTGTATGCT
TTACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCT
GGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCTGCCCCTTCCTGCTCATGCTGCTCTACTGGTCGATATTC
CCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAAGAATCGCATGAAC
CCTGAGGGCGACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGGGG
ACACGGAACCTGTGGAAGAACATTGTGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATG
GGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATG
TGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGCCTC
CTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGAACTGCAGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAA
TTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTGCGGAGATCACCCCGACG
GTGATAAGGTGTGGCGGGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGAGCTGCACAACCAGAAA
GGCTACTTCCTGCACCACATCATCTTTGCCTGCTGCACGCTCATCTGCATCATCTGCATCCTCCTGCTGCCCGAGAGCAGGGACCAGAAC
CTGCCTGAGAACATTTCTAACGGGGAGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAAC
GCCGAGCTCAAGGACTACTCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGAAGGCC

>In-frame_CORO2B_ENST00000566799_chr15_68871616_+_SLC22A23_ENST00000406686_chr6_3416089_-_1422nt
ATGACTGTCACAAAGTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTTTGGC
TACCTAATAACTGGATGCATTGCTGACTGGGTCGGCCGGCGGCCTGTGCTGCTGTTTTCCATCATCTTCATTCTGATCTTTGGACTGACT
GTGGCACTGTCAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATTCTCACCTTGTATGCT
TTACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCT
GGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCTGCCCCTTCCTGCTCATGCTGCTCTACTGGTCGATATTC
CCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCCTCCACTTCACACAGAAGAATCGCATGAAC
CCTGAGGGCGACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGGGG
ACACGGAACCTGTGGAAGAACATTGTGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATG
GGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCTGGCCATG
TGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCACCGCCCTGGCCTCACTCCTGCAGCTCGGCCTC
CTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTG
GGCATGTTTGCCTCCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAAGGTGTGGCGGGCTGGGG
CTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATC
TTTGCCTGCTGCACGCTCATCTGCATCATCTGCATCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGG
GAGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTACTCGGGC


* Fusion transcript sequences (Full-length transcript).
>In-frame_CORO2B_ENST00000566799_chr15_68871616_+_SLC22A23_ENST00000436008_chr6_3416089_-_5568nt
GCGCCCCCGCTCCGCCGCGGAGTTTCTGCATGACTGTCACAAAGTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGT
TCTCCTTACTGGTTGGATTAATCTTTGGCTACCTAATAACTGGATGCATTGCTGACTGGGTCGGCCGGCGGCCTGTGCTGCTGTTTTCCA
TCATCTTCATTCTGATCTTTGGACTGACTGTGGCACTGTCAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCC
TGGCTGGAATCATTCTCACCTTGTATGCTTTACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCG
TGGCCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCTGCCCCTTCC
TGCTCATGCTGCTCTACTGGTCGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCC
TCCACTTCACACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAGCTTTCCCGGAGGCCCA
AGAAGGTCTGCATCGTGAAGGTGGTGGGGACACGGAACCTGTGGAAGAACATTGTGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGA
TCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCA
GCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCACCG
CCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGAACTGCAGCTGAAGTTGGCCG
TAGGGATGAGTGACAGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATGCGGTGGGGAGCCTCAGCG
TGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAAGGTGTGGCGGGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGG
CACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATCTTTGCCTGCTGCACGCTCATCTGCATCATCTGCATCC
TCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAACATTTCTAACGGGGAGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGA
AGGGGGAGCAGCCACTGCTGCTCACCAACGCCGAGCTCAAGGACTACTCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACACTGCCCG
AGGGTGCCACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCTTGGGCACAGGTTTA
CAGACCAGGGACCGAACACGCAGCCAGGGGTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAATCCTGTCTTTC
CAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAACCCTTTCAAGACTTTCTTTTCTGCCGTTAAATGTGTGTATT
TATTTTGGTCATTTTTACGAGAAGCACTTTATTCCCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGT
TGCTCTGGGAAGATGCCACAGTGACCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCCCC
AGGCTGCCTGCCTGCGTGCAGAGGCAGGAGAGGACCGTGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGG
CTTTTGCTAGAGTCTGTGTATGGTTTTTTAAGGTCCTTTTTCCCTTTCTGTTTGTAAGGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCA
GCTCACAGACGCCGTTAAAACCAGCTTCATCTTTCCTTCAGGATCATCCTTTTGTACTTGATGCTGGAAGCTCTTGGAGAAAAAGCTTAA
ACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGATGT
GCTCGTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACA
TGGCTACTTTCTAAGCTACAAACCATTAGAAAATAACTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGGGGCTGCCCTCCACACACA
CACGCCCGTCACCCACACCTTGAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCACTCCAGGGAGCACCCGC
AGGAGCTGGGCCCCCTCACGCCTGCCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGCTTCGGGCAGGGA
GCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAAAGCAATAACTCACCAAAGCT
CAACGCTGCCCCTGCCTCGACCTCCATGGGTCTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAG
GAAACTTGTAGGACACCCAAGGCGACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCT
GGACAGCCTGGCTTCTTACTGGCATTGTCCAACTCATCCCTTCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTCCAGGGAAATTGTG
GTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGACAGTTGCTAGAATTCACAGGGCAGAAAAGGGGTTGACCTTCTCCCCTTC
TGGCTTTCCACCCGGCCTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGGCCTGGAGATGTGTAA
AGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGG
GAGGCTGTCTGGCCAGCCTCTCCCTGCCTCCACTTGCTCCACGTCCAGCTCCTCACCTTCCCTCTTTTTTAAAGTCACATTTCCATGTTT
CAACATTAGTTTGCATTCACCTTTACAAAGGCCTTTCTTTAGATCTGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCCTTTTACCTTT
TTTGGAGTACTTGCTATAAAGCCACCTGTCAACAAACCCCCATTATGTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTG
GGGAAGGTGGGAAGGATCCAGCGAGGCCCCTGAGCCTGCACCTGGACAGGTGTACGTCTGCACCCATCACCCTCAGCACCAGGCCACCCT
GCAGTCCACTTACTGTACTGTGTTGTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACTGGTCGTGTAAACTTTTTTTTTT
TTTTGGAAATTGAAGCTGTAGAGTGCTGCCCGAAATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTC
TGATCTCCACCTCAAATGACAATAAAAAACTGGTCCAACGAAGACACTGCTCAGCACTTCAGCCATCAGGACTAATCCATCGATGACTGG
AAAAGAGGCTAGCTTTGAGGAAAACAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGTGAGGCTGACTTGCCGACGGTCGGCAGGTAA
TGGCTCTCAGCCGGCGAGGCGGTCCCACAGCTCTCCTCCCAGGGCAGCCTGAGGAGGAGGAGGCCGGGTGCCTGTTTGGTGGCAGCTTCA
GCCTAGGGATACCTGAAGCTGTTGAGCAACACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATC
CGGTACCAAGTGAGCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGGCTCAGCAGGGGAGGCTGCTACGGCTGC
CCACTTCCCAGCACCGTCTGTCACGCTTGAACCCCTCTGTGCTGTTCCCTTCCTGGCTAATAGGGAGACCCTTCGCAGGCACCCACTGTT
TCAACTTGACCCTCCCACCCCCTGCTACTCTCCTCCACACACCCCTCCGTTCCGCTAGCCTACCCTGTCAGCCTTTCAATAAAAGTTATG
CACAAATGTGAACACCTGAGATGGAGCTGAACATTTCTTCACTTTGTTCTTTTTCTGAAGTCAAACTCTTATCAAATGCCCTAAAATTAT
TACCACCCAAGAGAAACAGGAAAAAGGTTACATGTTTTTGTTTACTGAGAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGG
TTTGGCTACAGAACAGAAAGAAAACAAAAACAAACCTCGTAAGGGAAGTATCACACTCAGACACCACCGCTTCCTAGAGCCAAATGAGCA
ATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTCCACACTACAGC
TGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCATGTCCCGTGTGTTTTGGAAAAGCAGTATGGTGTGTCATGTCTAGCGGCGAACACT
TCCCTCCCTGTCCTTGAGGTTGTAATATAAAAACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAG
CTTACGCTGAGTTCTGAACTGTCGTTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTAAATG
TACAGAAATAAAAACGTTGCCCCATTAACAGATTTCCTCTGGAATGTCTTCCCTACCTCACCTGATGGTATCCACCGAAGGGCATTTCAC
TACCATTAATGGTGAGTAATAAAATCCTCCGTGTTCATTCAGACCTCACTGCGTCACTACTTTGAACGCCTCTGTAAGCTGTGTCTTCAC
TCGCCCCGAGGTGGGTGGAGGGAGGCCTCTCACTCTGCTTCGAGTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGATTAAACACAC
ACTGTTTACCAAGTGCCACTCTCAGACCACCTGAGAGACGGGGGCCATCAGTAAAATTAAGAGGAATTTTTTTCCCTTGTTCGTGTATGT
TCTGCTGATCCGTGGCCTGAAGGTTCCTAGAGACGTCAAGAAATGAATATCTTACACTGTGATTCTGTGAGGAAAGACTGGTAACCCAAA

>In-frame_CORO2B_ENST00000566799_chr15_68871616_+_SLC22A23_ENST00000406686_chr6_3416089_-_5048nt
GCGCCCCCGCTCCGCCGCGGAGTTTCTGCATGACTGTCACAAAGTGGGATCTTGTGTGTGATAATGCCTGGAAGGTCCATATCGCTAAGT
TCTCCTTACTGGTTGGATTAATCTTTGGCTACCTAATAACTGGATGCATTGCTGACTGGGTCGGCCGGCGGCCTGTGCTGCTGTTTTCCA
TCATCTTCATTCTGATCTTTGGACTGACTGTGGCACTGTCAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCC
TGGCTGGAATCATTCTCACCTTGTATGCTTTACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCG
TGGCCATGGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCTGCCCCTTCC
TGCTCATGCTGCTCTACTGGTCGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTGATCC
TCCACTTCACACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGGTGTGATACCAGAGCTGGAGAAAGAGCTTTCCCGGAGGCCCA
AGAAGGTCTGCATCGTGAAGGTGGTGGGGACACGGAACCTGTGGAAGAACATTGTGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGA
TCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAGGTGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCA
GCATCGCGCTGGTGTCCTGCCTGGCCATGTGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCACCG
CCCTGGCCTCACTCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGGGATGAGTGACAGCGTCAAGG
ACAAATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATGCGGTGGGGAGCCTCAGCGTGTTCTTCTGTGCGGAGATCACCC
CGACGGTGATAAGGTGTGGCGGGCTGGGGCTGGTGCTGGCCAGCGCGGGCTTCGGCATGCTGACGGCACCCATCATCGAGCTGCACAACC
AGAAAGGCTACTTCCTGCACCACATCATCTTTGCCTGCTGCACGCTCATCTGCATCATCTGCATCCTCCTGCTGCCCGAGAGCAGGGACC
AGAACCTGCCTGAGAACATTTCTAACGGGGAGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCA
CCAACGCCGAGCTCAAGGACTACTCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCCACGGCCAACGGCATGA
AGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCTTGGGCACAGGTTTACAGACCAGGGACCGAACACGCAGC
CAGGGGTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAACTGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCG
GAGGAGACAAACTCTTTGGAAATAACCCTTTCAAGACTTTCTTTTCTGCCGTTAAATGTGTGTATTTATTTTGGTCATTTTTACGAGAAG
CACTTTATTCCCTCTCCCTCTCACTGATCACAAATGGAATCACCTCCCTGGGCAGCGAGACGCAGTTGCTCTGGGAAGATGCCACAGTGA
CCAGGGCCATGGCCGGTCCCTCTGGGGAGATGGGACACGGCTCCTGGCAGCACCCAGGAGCCCCCCAGGCTGCCTGCCTGCGTGCAGAGG
CAGGAGAGGACCGTGGAGCGTTTCCGGGACTGCATTTTAGACGGAGTGAAATGTACATGAATTTGGCTTTTGCTAGAGTCTGTGTATGGT
TTTTTAAGGTCCTTTTTCCCTTTCTGTTTGTAAGGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCACAGACGCCGTTAAAACCAG
CTTCATCTTTCCTTCAGGATCATCCTTTTGTACTTGATGCTGGAAGCTCTTGGAGAAAAAGCTTAAACATTTCACCAGAAATCTTAATTG
AGCAGCAGTCATATCGCCACAGCTTTGTGAGTACACAGCTAACAGATGCGTCGAGACCTGAGATGTGCTCGTTTTTATTCCTCCTCTCCC
AGATTGGCTCCAGCAGAAAAGTCCCTCGTGCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGCTACTTTCTAAGCTACAAACC
ATTAGAAAATAACTCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGGGGCTGCCCTCCACACACACACGCCCGTCACCCACACCTTGAG
CACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCACTCCAGGGAGCACCCGCAGGAGCTGGGCCCCCTCACGCCTG
CCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGCTTCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTC
CAAATGACCTCCAGCCTCTCGAAGGCATCAAGACAAATTGAAAGAAAGCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTCGACCTC
CATGGGTCTCTTCGTGTTCCTCGTTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCG
ACTAAGAGACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTCTTACTGGCA
TTGTCCAACTCATCCCTTCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTCCAGGGAAATTGTGGTCTCGGGCCTGGGTGAGACAATG
AAGTGACTTCCAACCGACAGTTGCTAGAATTCACAGGGCAGAAAAGGGGTTGACCTTCTCCCCTTCTGGCTTTCCACCCGGCCTGCTGCT
TGCTGTCGCCACTCATGTCTCCTCCACATGCGGTCCACACATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGAC
TCTTGGCCACGTGTTTCCAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTCTGGCCAGCCTCTCCC
TGCCTCCACTTGCTCCACGTCCAGCTCCTCACCTTCCCTCTTTTTTAAAGTCACATTTCCATGTTTCAACATTAGTTTGCATTCACCTTT
ACAAAGGCCTTTCTTTAGATCTGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCCTTTTACCTTTTTTGGAGTACTTGCTATAAAGCCA
CCTGTCAACAAACCCCCATTATGTACAGAATAGGACCTATCCAGTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCAGCGA
GGCCCCTGAGCCTGCACCTGGACAGGTGTACGTCTGCACCCATCACCCTCAGCACCAGGCCACCCTGCAGTCCACTTACTGTACTGTGTT
GTGGAAGGATATGCTAAGTGATGAAAGTTGCGAGCAGTCTCACTGGTCGTGTAAACTTTTTTTTTTTTTTGGAAATTGAAGCTGTAGAGT
GCTGCCCGAAATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTCTGATCTCCACCTCAAATGACAATA
AAAAACTGGTCCAACGAAGACACTGCTCAGCACTTCAGCCATCAGGACTAATCCATCGATGACTGGAAAAGAGGCTAGCTTTGAGGAAAA
CAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGTGAGGCTGACTTGCCGACGGTCGGCAGGTAATGGCTCTCAGCCGGCGAGGCGGTC
CCACAGCTCTCCTCCCAGGGCAGCCTGAGGAGGAGGAGGCCGGGTGCCTGTTTGGTGGCAGCTTCAGCCTAGGGATACCTGAAGCTGTTG
AGCAACACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGAGCAAGGTGGCA
GGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGGCTCAGCAGGGGAGGCTGCTACGGCTGCCCACTTCCCAGCACCGTCTGTCAC
GCTTGAACCCCTCTGTGCTGTTCCCTTCCTGGCTAATAGGGAGACCCTTCGCAGGCACCCACTGTTTCAACTTGACCCTCCCACCCCCTG
CTACTCTCCTCCACACACCCCTCCGTTCCGCTAGCCTACCCTGTCAGCCTTTCAATAAAAGTTATGCACAAATGTGAACACCTGAGATGG
AGCTGAACATTTCTTCACTTTGTTCTTTTTCTGAAGTCAAACTCTTATCAAATGCCCTAAAATTATTACCACCCAAGAGAAACAGGAAAA
AGGTTACATGTTTTTGTTTACTGAGAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCTACAGAACAGAAAGAAAA
CAAAAACAAACCTCGTAAGGGAAGTATCACACTCAGACACCACCGCTTCCTAGAGCCAAATGAGCAATCCCAAACTGCAAGTGCCATAAG
TGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTATCGCATGTGCGGGGGAGGTCCACACTACAGCTGTCCTCTCGTCTAGAAGGCACCA
CCTCGCTTTCATGTCCCGTGTGTTTTGGAAAAGCAGTATGGTGTGTCATGTCTAGCGGCGAACACTTCCCTCCCTGTCCTTGAGGTTGTA
ATATAAAAACTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGAACTGTCG
TTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTAAATGTACAGAAATAAAAACGTTGCCCCA


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FusionGenePPI for CORO2B_SLC22A23


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
CORO2BTSC22D1, VCL, APPBP2, CORO2A, PRKG1, SHC1, ARHGEF25SLC22A23KRTAP5-9, PSMA3, KRTAP10-8, NOTCH2NL, LGALS8, CLEC2D, ATP6V0D1, BMP4, DLK2, SIRT2, PAXBP1, KPRP, TAX1BP1, DSCC1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for CORO2B_SLC22A23


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CORO2B_SLC22A23


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
TgeneSLC22A23C0023893Liver Cirrhosis, Experimental1CTD_human