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Fusion gene ID: 8017 |
FusionGeneSummary for COLEC11_SOX7 |
Fusion gene summary |
Fusion gene information | Fusion gene name: COLEC11_SOX7 | Fusion gene ID: 8017 | Hgene | Tgene | Gene symbol | COLEC11 | SOX7 | Gene ID | 78989 | 83595 |
Gene name | collectin subfamily member 11 | SRY-box 7 | |
Synonyms | 3MC2|CL-K1-I|CL-K1-II|CL-K1-IIa|CL-K1-IIb|CLK1 | - | |
Cytomap | 2p25.3 | 8p23.1 | |
Type of gene | protein-coding | protein-coding | |
Description | collectin-11Collectin K1collectin kidney protein 1collectin sub-family member 11 | transcription factor SOX-7SRY (sex determining region Y)-box 7 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9BWP8 | Q9BT81 | |
Ensembl transtripts involved in fusion gene | ENST00000382062, ENST00000487365, ENST00000236693, ENST00000349077, ENST00000418971, ENST00000403096, ENST00000402922, ENST00000402794, ENST00000404205, | ENST00000554914, ENST00000553390, ENST00000304501, | |
Fusion gene scores | * DoF score | 3 X 2 X 2=12 | 4 X 3 X 2=24 |
# samples | 2 | 3 | |
** MAII score | log2(2/12*10)=0.736965594166206 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(3/24*10)=0.321928094887362 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: COLEC11 [Title/Abstract] AND SOX7 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Transcription factor involved fusion gene, inframe and retained DNA-binding domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | SOX7 | GO:0001706 | endoderm formation | 18682240 |
Tgene | SOX7 | GO:0008285 | negative regulation of cell proliferation | 19108950 |
Tgene | SOX7 | GO:0043280 | positive regulation of cysteine-type endopeptidase activity involved in apoptotic process | 19108950 |
Tgene | SOX7 | GO:0045892 | negative regulation of transcription, DNA-templated | 19108950 |
Tgene | SOX7 | GO:0060828 | regulation of canonical Wnt signaling pathway | 19108950 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SARC | TCGA-X6-A8C6-01A | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000382062 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
In-frame | ENST00000382062 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
5CDS-intron | ENST00000382062 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
3UTR-3CDS | ENST00000487365 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
3UTR-3CDS | ENST00000487365 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
3UTR-intron | ENST00000487365 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
Frame-shift | ENST00000236693 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
Frame-shift | ENST00000236693 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
5CDS-intron | ENST00000236693 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
In-frame | ENST00000349077 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
In-frame | ENST00000349077 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
5CDS-intron | ENST00000349077 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
In-frame | ENST00000418971 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
In-frame | ENST00000418971 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
5CDS-intron | ENST00000418971 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000403096 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000403096 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-intron | ENST00000403096 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000402922 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000402922 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-intron | ENST00000402922 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000402794 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000402794 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-intron | ENST00000402794 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000404205 | ENST00000554914 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-3CDS | ENST00000404205 | ENST00000553390 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
intron-intron | ENST00000404205 | ENST00000304501 | COLEC11 | chr2 | 3652060 | + | SOX7 | chr8 | 10692285 | - |
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FusionProtFeatures for COLEC11_SOX7 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
COLEC11 | SOX7 |
Binds to and activates the CDH5 promoter, hence plays arole in the transcriptional regulation of genes expressed in thehemogenic endothelium and blocks further differentiation intoblood precursors (By similarity). May be required for the survivalof both hematopoietic and endothelial precursors duringspecification (By similarity). Competes with GATA4 for binding andactivation of the FGF3 promoter (By similarity). RepressesWnt/beta-catenin-stimulated transcription, probably by targetingCTNNB1 to proteasomal degradation. Binds the DNA sequence 5'-AACAAT-3'. {ECO:0000250, ECO:0000269|PubMed:18819930}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >SOX7 | chr2:3652060 | chr8:10692285 | ENST00000304501 | - | 0 | 2 | 45_113 | -27 | 389 | DNA binding | HMG box |
Tgene | >SOX7 | chr2:3652060 | chr8:10692285 | ENST00000304501 | - | 0 | 2 | 268_388 | -27 | 389 | Domain | Sox C-terminal |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000236693 | + | 2 | 8 | 114_148 | 14 | 269 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000349077 | + | 2 | 7 | 114_148 | 43 | 272 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000382062 | + | 2 | 6 | 114_148 | 43 | 248 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402794 | + | 1 | 5 | 114_148 | -47 | 222 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402922 | + | 1 | 5 | 114_148 | -47 | 222 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000403096 | + | 1 | 6 | 114_148 | -164 | 246 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000404205 | + | 1 | 4 | 114_148 | -47 | 198 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000418971 | + | 3 | 8 | 114_148 | 57 | 286 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000236693 | + | 2 | 8 | 149_265 | 14 | 269 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000236693 | + | 2 | 8 | 65_112 | 14 | 269 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000349077 | + | 2 | 7 | 149_265 | 43 | 272 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000349077 | + | 2 | 7 | 65_112 | 43 | 272 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000382062 | + | 2 | 6 | 149_265 | 43 | 248 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000382062 | + | 2 | 6 | 65_112 | 43 | 248 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402794 | + | 1 | 5 | 149_265 | -47 | 222 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402794 | + | 1 | 5 | 65_112 | -47 | 222 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402922 | + | 1 | 5 | 149_265 | -47 | 222 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402922 | + | 1 | 5 | 65_112 | -47 | 222 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000403096 | + | 1 | 6 | 149_265 | -164 | 246 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000403096 | + | 1 | 6 | 65_112 | -164 | 246 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000404205 | + | 1 | 4 | 149_265 | -47 | 198 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000404205 | + | 1 | 4 | 65_112 | -47 | 198 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000418971 | + | 3 | 8 | 149_265 | 57 | 286 | Domain | C-type lectin |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000418971 | + | 3 | 8 | 65_112 | 57 | 286 | Domain | Note=Collagen-like |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000236693 | + | 2 | 8 | 252_254 | 14 | 269 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000349077 | + | 2 | 7 | 252_254 | 43 | 272 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000382062 | + | 2 | 6 | 252_254 | 43 | 248 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402794 | + | 1 | 5 | 252_254 | -47 | 222 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000402922 | + | 1 | 5 | 252_254 | -47 | 222 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000403096 | + | 1 | 6 | 252_254 | -164 | 246 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000404205 | + | 1 | 4 | 252_254 | -47 | 198 | Region | Carbohydrate binding |
Hgene | >COLEC11 | chr2:3652060 | chr8:10692285 | ENST00000418971 | + | 3 | 8 | 252_254 | 57 | 286 | Region | Carbohydrate binding |
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FusionGeneSequence for COLEC11_SOX7 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_COLEC11_ENST00000382062_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_478aa MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGAT DHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKFTKGKSWKALTLSQK RPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEG PAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMM SPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQVT >In-frame_COLEC11_ENST00000382062_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_478aa MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGAT DHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKFTKGKSWKALTLSQK RPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEG PAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMM SPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQVT >In-frame_COLEC11_ENST00000349077_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_478aa MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGAT DHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKFTKGKSWKALTLSQK RPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEG PAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMM SPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQVT >In-frame_COLEC11_ENST00000349077_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_478aa MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGWSKGKGLGAQEQGAT DHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKFTKGKSWKALTLSQK RPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSPGTALPSLRGCYHEG PAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPLGSLALGQSPGVSMM SPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATGAMALSGHVPVSQVT >In-frame_COLEC11_ENST00000418971_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_492aa MKKQRGVGVLPALRMRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGW SKGKGLGAQEQGATDHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKF TKGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSP GTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPL GSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATG >In-frame_COLEC11_ENST00000418971_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_492aa MKKQRGVGVLPALRMRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGRRKQKWAVDPQNTAWSNDDSKFGQRMLEKMGW SKGKGLGAQEQGATDHIKVQVKNNHLGLGATINNEDNWIAHQDDFNQLLAELNTCHGQETTDSSDKKEKKSFSLEEKSKISKNRVHYMKF TKGKSWKALTLSQKRPYVDEAERLRLQHMQDYPNYKYRPRRKKQAKRLCKRVDPGFLLSSLSRDQNALPEKRSGSRGALGEKEDRGEYSP GTALPSLRGCYHEGPAGGGGGGTPSSVDTYPYGLPTPPEMSPLDVLEPEQTFFSSPCQEEHGHPRRIPHLPGHPYSPEYAPSPLHCSHPL GSLALGQSPGVSMMSPVPGCPPSPAYYSPATYHPLHSNLQAHLGQLSPPPEHPGFDALDQLSQVELLGDMDRNEFDQYLNTPGHPDSATG |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_COLEC11_ENST00000382062_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_1434nt ATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGAT GACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGT AATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACA GATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGAT TTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTT GAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAG AGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAG GCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGC AGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGG CCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGAC GTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCG TACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATG TCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGC CAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAA TTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACA >In-frame_COLEC11_ENST00000382062_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_1434nt ATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGAT GACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGT AATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACA GATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGAT TTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTT GAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAG AGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAG GCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGC AGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGG CCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGAC GTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCG TACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATG TCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGC CAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAA TTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACA >In-frame_COLEC11_ENST00000349077_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_1434nt ATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGAT GACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGT AATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACA GATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGAT TTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTT GAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAG AGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAG GCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGC AGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGG CCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGAC GTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCG TACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATG TCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGC CAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAA TTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACA >In-frame_COLEC11_ENST00000349077_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_1434nt ATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGAT GACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGT AATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACA GATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGAT TTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTT GAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAG AGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAG GCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGC AGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGG CCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGAC GTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCG TACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATG TCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGC CAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAA TTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACA >In-frame_COLEC11_ENST00000418971_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_1476nt ATGAAGAAACAAAGAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTC CTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGG AAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGG TCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAGATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCT ACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACC ACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTC ACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAG GACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCC CTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGCAGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCC GGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGGCCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTAC CCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAG CATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCGTACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTG GGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATGTCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCC ACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGCCAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAA CTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGG GCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACACCAACGGGTCCCACAGAGACCAGCCTCATCTCCGTCCTGGCTGATGCC >In-frame_COLEC11_ENST00000418971_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_1476nt ATGAAGAAACAAAGAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTC CTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGG AAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGG TCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAGATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCT ACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACC ACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTC ACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAG GACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCC CTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGCAGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCC GGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGGCCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTAC CCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAG CATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCGTACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTG GGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATGTCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCC ACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGCCAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAA CTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGG GCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACACCAACGGGTCCCACAGAGACCAGCCTCATCTCCGTCCTGGCTGATGCC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_COLEC11_ENST00000382062_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_2013nt GGACGGTGGACGCAGCGCAGACAGGAAGCTCCCCGAGATAACGCTGCGGCCGGGCGGCCTGATTTGCTGGGCTGTCTGATGGCCCGGGCC GAGGCTTCTCCCTGCGCCTGGGACTGCGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACG GGCAGGACGCCCCGTTCGCCTAGCGCGTGCTCAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTT CTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCT GGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTCCAAGTTTGGCCAGCGGATG CTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAGATCATATTAAAGTTCAAGTGAAAAATAAC CACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACT TGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGT GTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTG CGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCG GGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGCAGCCGGGGGGCGCTGGGGGAGAAGGAGGAC AGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGGCCGGCTGGTGGTGGCGGCGGCGGCACCCCG AGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCAGACCTTCTTCTCC TCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCGTACTCACCGGAGTACGCCCCAAGCCCTCTC CACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATGTCCCCTGTACCCGGCTGTCCCCCATCTCCT GCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGCCAGCTTTCCCCGCCTCCTGAGCACCCTGGC TTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCAC CCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACACCAACGGGTCCCACAGAGACCAGCCTCATC TCCGTCCTGGCTGATGCCACGGCCACGTACTACAACAGCTACAGTGTGTCATAGAGCTGGAGGCGCCCCGTCCGGTCAGCCCTCGCGCCC TCTCCTTCTTGTGCCTTGAGTGGCAGAGGAGCCGTCCAGCCACACCAGCTTTCCTCCCACCGCTCAGGGCAGGGAGGTCTGAACTGCGGC CCCAGAGCCTTTGGCCTAAGCTGGACTCTCCTTATCCGAGTGCCGCCTCTATCCCCTTCCCCACGTTCCAGCCCCTGCAGCCCACATTTT AAGTATATTCCTTCAAGTGAGTTTTCCTCCAGCCCCTGAGAGTTGCTGTCTCCCAGTGGAATGTTCACTGACGTCTTTTCTTGGTAGCCA >In-frame_COLEC11_ENST00000382062_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_2013nt GGACGGTGGACGCAGCGCAGACAGGAAGCTCCCCGAGATAACGCTGCGGCCGGGCGGCCTGATTTGCTGGGCTGTCTGATGGCCCGGGCC GAGGCTTCTCCCTGCGCCTGGGACTGCGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACG GGCAGGACGCCCCGTTCGCCTAGCGCGTGCTCAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTT CTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCT GGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTCCAAGTTTGGCCAGCGGATG CTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAGATCATATTAAAGTTCAAGTGAAAAATAAC CACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACT TGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGT GTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTG CGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCG GGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGCAGCCGGGGGGCGCTGGGGGAGAAGGAGGAC AGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGGCCGGCTGGTGGTGGCGGCGGCGGCACCCCG AGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCAGACCTTCTTCTCC TCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCGTACTCACCGGAGTACGCCCCAAGCCCTCTC CACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATGTCCCCTGTACCCGGCTGTCCCCCATCTCCT GCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGCCAGCTTTCCCCGCCTCCTGAGCACCCTGGC TTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCAC CCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACACCAACGGGTCCCACAGAGACCAGCCTCATC TCCGTCCTGGCTGATGCCACGGCCACGTACTACAACAGCTACAGTGTGTCATAGAGCTGGAGGCGCCCCGTCCGGTCAGCCCTCGCGCCC TCTCCTTCTTGTGCCTTGAGTGGCAGAGGAGCCGTCCAGCCACACCAGCTTTCCTCCCACCGCTCAGGGCAGGGAGGTCTGAACTGCGGC CCCAGAGCCTTTGGCCTAAGCTGGACTCTCCTTATCCGAGTGCCGCCTCTATCCCCTTCCCCACGTTCCAGCCCCTGCAGCCCACATTTT AAGTATATTCCTTCAAGTGAGTTTTCCTCCAGCCCCTGAGAGTTGCTGTCTCCCAGTGGAATGTTCACTGACGTCTTTTCTTGGTAGCCA >In-frame_COLEC11_ENST00000349077_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_1876nt GCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACGCCCCGTTCGCCTAGCGCGTGCTCAGGAGTTGGTGTCCT GCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCA GCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAA CACTGCCTGGAGTAATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGA GCAAGGAGCCACAGATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGC CCATCAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAA ATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGAC GCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCG CAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGA GAAGAGAAGCGGCAGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTG CTACCACGAGGGGCCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAAT GTCTCCCCTGGACGTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCT GCCAGGGCACCCGTACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGG CGTCTCCATGATGTCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCA AGCCCACCTGGGCCAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACAT GGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGT CTCCCAGGTGACACCAACGGGTCCCACAGAGACCAGCCTCATCTCCGTCCTGGCTGATGCCACGGCCACGTACTACAACAGCTACAGTGT GTCATAGAGCTGGAGGCGCCCCGTCCGGTCAGCCCTCGCGCCCTCTCCTTCTTGTGCCTTGAGTGGCAGAGGAGCCGTCCAGCCACACCA GCTTTCCTCCCACCGCTCAGGGCAGGGAGGTCTGAACTGCGGCCCCAGAGCCTTTGGCCTAAGCTGGACTCTCCTTATCCGAGTGCCGCC TCTATCCCCTTCCCCACGTTCCAGCCCCTGCAGCCCACATTTTAAGTATATTCCTTCAAGTGAGTTTTCCTCCAGCCCCTGAGAGTTGCT >In-frame_COLEC11_ENST00000349077_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_1876nt GCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACGCCCCGTTCGCCTAGCGCGTGCTCAGGAGTTGGTGTCCT GCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCA GCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAA CACTGCCTGGAGTAATGACGATTCCAAGTTTGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGA GCAAGGAGCCACAGATCATATTAAAGTTCAAGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGC CCATCAGGATGATTTTAACCAGCTTCTGGCCGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAA ATCTTTTAGCCTTGAGGAAAAGTCCAAAATCTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGAC GCTGTCCCAGAAGAGGCCGTACGTGGACGAGGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCG CAGGAAGAAGCAGGCCAAGCGGCTGTGCAAGCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGA GAAGAGAAGCGGCAGCCGGGGGGCGCTGGGGGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTG CTACCACGAGGGGCCGGCTGGTGGTGGCGGCGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAAT GTCTCCCCTGGACGTGCTGGAGCCGGAGCAGACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCT GCCAGGGCACCCGTACTCACCGGAGTACGCCCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGG CGTCTCCATGATGTCCCCTGTACCCGGCTGTCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCA AGCCCACCTGGGCCAGCTTTCCCCGCCTCCTGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACAT GGATCGCAATGAATTCGACCAGTATTTGAACACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGT CTCCCAGGTGACACCAACGGGTCCCACAGAGACCAGCCTCATCTCCGTCCTGGCTGATGCCACGGCCACGTACTACAACAGCTACAGTGT GTCATAGAGCTGGAGGCGCCCCGTCCGGTCAGCCCTCGCGCCCTCTCCTTCTTGTGCCTTGAGTGGCAGAGGAGCCGTCCAGCCACACCA GCTTTCCTCCCACCGCTCAGGGCAGGGAGGTCTGAACTGCGGCCCCAGAGCCTTTGGCCTAAGCTGGACTCTCCTTATCCGAGTGCCGCC TCTATCCCCTTCCCCACGTTCCAGCCCCTGCAGCCCACATTTTAAGTATATTCCTTCAAGTGAGTTTTCCTCCAGCCCCTGAGAGTTGCT >In-frame_COLEC11_ENST00000418971_chr2_3652060_+_SOX7_ENST00000554914_chr8_10692285_-_2026nt AGATTTGGGAGAAGGATTTCAAATGACTTCCCTTCGAGCTGCAGGGCTATCTTGGGCATCTTGACCTCCACACATTTCTGGGAGAACTCC TCGTGCAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCACTGCGCCTGG TCTTGTTTTCCAAGTTGTAACGCCCTTCACGATGAAGAAACAAAGAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGC CCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCA GATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTCCAAGTT TGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAGATCATATTAAAGTTCA AGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGATTTTAACCAGCTTCTGGC CGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAAT CTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGA GGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAA GCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGCAGCCGGGGGGCGCTGGG GGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGGCCGGCTGGTGGTGGCGG CGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCA GACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCGTACTCACCGGAGTACGC CCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATGTCCCCTGTACCCGGCTG TCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGCCAGCTTTCCCCGCCTCC TGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAA CACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACACCAACGGGTCCCACAGA GACCAGCCTCATCTCCGTCCTGGCTGATGCCACGGCCACGTACTACAACAGCTACAGTGTGTCATAGAGCTGGAGGCGCCCCGTCCGGTC AGCCCTCGCGCCCTCTCCTTCTTGTGCCTTGAGTGGCAGAGGAGCCGTCCAGCCACACCAGCTTTCCTCCCACCGCTCAGGGCAGGGAGG TCTGAACTGCGGCCCCAGAGCCTTTGGCCTAAGCTGGACTCTCCTTATCCGAGTGCCGCCTCTATCCCCTTCCCCACGTTCCAGCCCCTG CAGCCCACATTTTAAGTATATTCCTTCAAGTGAGTTTTCCTCCAGCCCCTGAGAGTTGCTGTCTCCCAGTGGAATGTTCACTGACGTCTT >In-frame_COLEC11_ENST00000418971_chr2_3652060_+_SOX7_ENST00000553390_chr8_10692285_-_2026nt AGATTTGGGAGAAGGATTTCAAATGACTTCCCTTCGAGCTGCAGGGCTATCTTGGGCATCTTGACCTCCACACATTTCTGGGAGAACTCC TCGTGCAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCACCTCAGCCTCCCAAAGTGCTGGAATTACAGGTGTGAGCCACTGCGCCTGG TCTTGTTTTCCAAGTTGTAACGCCCTTCACGATGAAGAAACAAAGAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGC CCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCA GATCCTCGTCCCTGGCCTCAAAGGTCGGCGGAAGCAGAAGTGGGCTGTGGATCCTCAGAACACTGCCTGGAGTAATGACGATTCCAAGTT TGGCCAGCGGATGCTAGAGAAGATGGGGTGGTCTAAAGGAAAGGGTTTAGGGGCTCAGGAGCAAGGAGCCACAGATCATATTAAAGTTCA AGTGAAAAATAACCACCTGGGACTCGGAGCTACCATCAATAATGAAGACAACTGGATTGCCCATCAGGATGATTTTAACCAGCTTCTGGC CGAACTGAACACTTGCCATGGGCAGGAAACCACAGATTCCTCGGACAAGAAGGAAAAGAAATCTTTTAGCCTTGAGGAAAAGTCCAAAAT CTCCAAAAACCGTGTTCACTATATGAAATTCACAAAAGGAAAGTCGTGGAAGGCGCTGACGCTGTCCCAGAAGAGGCCGTACGTGGACGA GGCGGAGCGGCTGCGCCTGCAGCACATGCAGGACTACCCCAACTACAAGTACCGGCCGCGCAGGAAGAAGCAGGCCAAGCGGCTGTGCAA GCGCGTGGACCCGGGCTTCCTTCTGAGCTCCCTCTCCCGGGACCAGAACGCCCTGCCGGAGAAGAGAAGCGGCAGCCGGGGGGCGCTGGG GGAGAAGGAGGACAGGGGTGAGTACTCCCCCGGCACTGCCCTGCCCAGCCTCCGGGGCTGCTACCACGAGGGGCCGGCTGGTGGTGGCGG CGGCGGCACCCCGAGCAGTGTGGACACGTACCCGTACGGGCTGCCCACACCTCCTGAAATGTCTCCCCTGGACGTGCTGGAGCCGGAGCA GACCTTCTTCTCCTCCCCCTGCCAGGAGGAGCATGGCCATCCCCGCCGCATCCCCCACCTGCCAGGGCACCCGTACTCACCGGAGTACGC CCCAAGCCCTCTCCACTGTAGCCACCCCCTGGGCTCCCTGGCCCTTGGCCAGTCCCCCGGCGTCTCCATGATGTCCCCTGTACCCGGCTG TCCCCCATCTCCTGCCTATTACTCCCCGGCCACCTACCACCCACTCCACTCCAACCTCCAAGCCCACCTGGGCCAGCTTTCCCCGCCTCC TGAGCACCCTGGCTTCGACGCCCTGGATCAACTGAGCCAGGTGGAACTCCTGGGGGACATGGATCGCAATGAATTCGACCAGTATTTGAA CACTCCTGGCCACCCAGACTCCGCCACAGGGGCCATGGCCCTCAGTGGGCATGTTCCGGTCTCCCAGGTGACACCAACGGGTCCCACAGA GACCAGCCTCATCTCCGTCCTGGCTGATGCCACGGCCACGTACTACAACAGCTACAGTGTGTCATAGAGCTGGAGGCGCCCCGTCCGGTC AGCCCTCGCGCCCTCTCCTTCTTGTGCCTTGAGTGGCAGAGGAGCCGTCCAGCCACACCAGCTTTCCTCCCACCGCTCAGGGCAGGGAGG TCTGAACTGCGGCCCCAGAGCCTTTGGCCTAAGCTGGACTCTCCTTATCCGAGTGCCGCCTCTATCCCCTTCCCCACGTTCCAGCCCCTG CAGCCCACATTTTAAGTATATTCCTTCAAGTGAGTTTTCCTCCAGCCCCTGAGAGTTGCTGTCTCCCAGTGGAATGTTCACTGACGTCTT |
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FusionGenePPI for COLEC11_SOX7 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
COLEC11 | ASB7, NELL2, HSPA5, CDC6, COLGALT2, RPL23, TIMP3, COL6A1, TRIM68, MTFR1, KLHDC2, FBXO21 | SOX7 | APP, SMAD7, SMAD5, GLRX3, EWSR1, FBXW7 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for COLEC11_SOX7 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for COLEC11_SOX7 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | COLEC11 | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |
Hgene | COLEC11 | C0549567 | Pigmentation Disorders | 1 | CTD_human |
Hgene | COLEC11 | C0796032 | Malpuech facial clefting syndrome | 1 | CTD_human |
Hgene | COLEC11 | C0796059 | Oculopalatoskeletal syndrome | 1 | CTD_human |
Hgene | COLEC11 | C0796279 | Carnevale syndrome | 1 | CTD_human;UNIPROT |