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Fusion gene ID: 7180 |
FusionGeneSummary for CHST11_HCFC2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CHST11_HCFC2 | Fusion gene ID: 7180 | Hgene | Tgene | Gene symbol | CHST11 | HCFC2 | Gene ID | 50515 | 29915 |
| Gene name | carbohydrate sulfotransferase 11 | host cell factor C2 | |
| Synonyms | C4ST|C4ST-1|C4ST1|HSA269537 | HCF-2|HCF2 | |
| Cytomap | 12q23.3 | 12q23.3 | |
| Type of gene | protein-coding | protein-coding | |
| Description | carbohydrate sulfotransferase 11C4S-1IgH/CHST11 fusioncarbohydrate (chondroitin 4) sulfotransferase 11chondroitin 4-O-sulfotransferase 1 | host cell factor 2C2 factor | |
| Modification date | 20180519 | 20180519 | |
| UniProtAcc | Q9NPF2 | Q9Y5Z7 | |
| Ensembl transtripts involved in fusion gene | ENST00000547956, ENST00000549260, ENST00000303694, ENST00000546689, ENST00000550711, | ENST00000229330, ENST00000550335, | |
| Fusion gene scores | * DoF score | 11 X 7 X 5=385 | 4 X 4 X 4=64 |
| # samples | 12 | 4 | |
| ** MAII score | log2(12/385*10)=-1.68182403997375 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(4/64*10)=-0.678071905112638 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CHST11 [Title/Abstract] AND HCFC2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | CHST11 | GO:0030206 | chondroitin sulfate biosynthetic process | 11056388 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | HNSC | TCGA-CV-7416-01A | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000547956 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000547956 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000549260 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000549260 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000303694 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000303694 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| In-frame | ENST00000546689 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| 5CDS-intron | ENST00000546689 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| intron-3CDS | ENST00000550711 | ENST00000229330 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
| intron-intron | ENST00000550711 | ENST00000550335 | CHST11 | chr12 | 104851292 | + | HCFC2 | chr12 | 104459945 | + |
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FusionProtFeatures for CHST11_HCFC2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CHST11 | HCFC2 |
| Catalyzes the transfer of sulfate to position 4 of theN-acetylgalactosamine (GalNAc) residue of chondroitin. Chondroitinsulfate constitutes the predominant proteoglycan present incartilage and is distributed on the surfaces of many cells andextracellular matrices. Can also sulfate Gal residues indesulfated dermatan sulfate. Preferentially sulfates inGlcA->GalNAc unit than in IdoA->GalNAc unit. Does not form 4, 6-di-O-sulfated GalNAc when chondroitin sulfate C is used as anacceptor. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 1_16 | 34 | 348 | Topological domain | Cytoplasmic |
| Hgene | CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 17_37 | 34 | 348 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | >HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 359_449 | 54 | 793 | Domain | Fibronectin type-III 1 |
| Tgene | >HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 583_675 | 54 | 793 | Domain | Fibronectin type-III 2 |
| Tgene | >HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 677_787 | 54 | 793 | Domain | Fibronectin type-III 3 |
| Tgene | >HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 207_255 | 54 | 793 | Repeat | Note=Kelch 3 |
| Tgene | >HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 257_303 | 54 | 793 | Repeat | Note=Kelch 4 |
| Tgene | >HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 83_130 | 54 | 793 | Repeat | Note=Kelch 2 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 124_130 | -147 | 353 | Nucleotide binding | PAPS |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 186_194 | -147 | 353 | Nucleotide binding | PAPS |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 124_130 | 34 | 348 | Nucleotide binding | PAPS |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 186_194 | 34 | 348 | Nucleotide binding | PAPS |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 1_16 | -147 | 353 | Topological domain | Cytoplasmic |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 38_352 | -147 | 353 | Topological domain | Lumenal |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000549260 | + | 1 | 3 | 38_352 | 34 | 348 | Topological domain | Lumenal |
| Hgene | >CHST11 | chr12:104851292 | chr12:104459945 | ENST00000303694 | + | 1 | 3 | 17_37 | -147 | 353 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | HCFC2 | chr12:104851292 | chr12:104459945 | ENST00000229330 | + | 0 | 15 | 34_79 | 54 | 793 | Repeat | Note=Kelch 1 |
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FusionGeneSequence for CHST11_HCFC2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_CHST11_ENST00000547956_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_778aa MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSMLHPATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQA SRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTA VIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSS FSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHV KWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILY PSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSE VDETYALPATKISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVP GTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYC >In-frame_CHST11_ENST00000549260_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_773aa MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQTTNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLW KKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCK KDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLN LDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEV STVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLAS NASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETY ALPATKISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYR FRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTS >In-frame_CHST11_ENST00000303694_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_778aa MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQSMLHPATNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQA SRWLWKKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTA VIYCKKDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSS FSYLNLDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHV KWDEVSTVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILY PSLASNASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSE VDETYALPATKISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVP GTGYRFRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYC >In-frame_CHST11_ENST00000546689_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_773aa MKPALLEVMRMNRICRMVLATCLGSFILVIFYFQTTNQWFLPAVRGDIPPGCAAHGFVCDGTRILVFGGMVEYGRYSNELYELQASRWLW KKVKPHPPPSGLPPCPRLGHSFSLYGNKCYLFGGLANESEDSNNNVPRYLNDFYELELQHGSGVVGWSIPVTKGVVPSPRESHTAVIYCK KDSGSPKMYVFGGMCGARLDDLWQLDLETMSWSKPETKGTVPLPRSLHTASVIGNKMYIFGGWVPHKGENTETSPHDCEWRCTSSFSYLN LDTTEWTTLVSDSQEDKKNSRPRPRAGHCAVAIGTRLYFWSGRDGYKKALNSQVCCKDLWYLDTEKPPAPSQVQLIKATTNSFHVKWDEV STVEGYLLQLSTDLPYQAASSDSSAAPNMQGVRMDPHRQGSNNIVPNSINDTINSTKTEQPATKETSMKNKPDFKALTDSNAILYPSLAS NASNHNSHVVDMLRKNEGPHTSANVGVLSSCLDVRTVIPETSVSSTVSSTQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETY ALPATKISRVETHATATPFSKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPKGKQSISKVGNADVPDYSLLKKQDLVPGTGYR FRVAAINGCGIGPFSKISEFKTCIPGFPGAPSAVRISKNVEGIHLSWEPPTSPSGNILEYSAYLAIRTAQIQDNPSQLVFMRIYCGLKTS |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_CHST11_ENST00000547956_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_2334nt ATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATC TTCTATTTCCAAAGTATGTTGCACCCAGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCAT GGATTTGTCTGTGATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCA AGTCGTTGGTTATGGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATAT GGTAACAAATGCTATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAG TTGGAGCTACAGCATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCT GTTATATATTGCAAAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTT GACTTAGAAACTATGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAAC AAGATGTACATTTTTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCA TTTTCTTACCTAAATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGA GCTGGCCACTGTGCTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGC TGCAAGGATCTTTGGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTC AAGTGGGATGAAGTGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCA GCACCAAATATGCAAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGC ACAAAAACTGAACAGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATAT CCATCTTTGGCATCAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTA GGTGTTCTAAGTAGTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACC CAGCAGACCATTAAAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAA GTTGATGAAACATATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCA AATCCAGTGGCCACAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTAT TTGCTGCCAAAAGGGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCA GGCACAGGATACAGATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCT GGTTTTCCTGGAGCTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGA AATATTTTGGAATATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGT GGTCTTAAGACATCATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATA >In-frame_CHST11_ENST00000549260_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_2319nt ATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATC TTCTATTTCCAAACTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGAT GGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGG AAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTAT TTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCAT GGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAA AAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATG TCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTT GGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAAT CTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCT GTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGG TATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTG TCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAA GGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAG CCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCA AATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGT TGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAA ACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATAT GCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACA GTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGG AAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGA TTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCT CCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATAT TCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCA TGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAA >In-frame_CHST11_ENST00000303694_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_2334nt ATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATC TTCTATTTCCAAAGTATGTTGCACCCAGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCAT GGATTTGTCTGTGATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCA AGTCGTTGGTTATGGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATAT GGTAACAAATGCTATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAG TTGGAGCTACAGCATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCT GTTATATATTGCAAAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTT GACTTAGAAACTATGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAAC AAGATGTACATTTTTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCA TTTTCTTACCTAAATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGA GCTGGCCACTGTGCTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGC TGCAAGGATCTTTGGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTC AAGTGGGATGAAGTGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCA GCACCAAATATGCAAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGC ACAAAAACTGAACAGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATAT CCATCTTTGGCATCAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTA GGTGTTCTAAGTAGTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACC CAGCAGACCATTAAAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAA GTTGATGAAACATATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCA AATCCAGTGGCCACAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTAT TTGCTGCCAAAAGGGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCA GGCACAGGATACAGATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCT GGTTTTCCTGGAGCTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGA AATATTTTGGAATATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGT GGTCTTAAGACATCATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATA >In-frame_CHST11_ENST00000546689_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_2319nt ATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATC TTCTATTTCCAAACTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGAT GGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGG AAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTAT TTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCAT GGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAA AAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATG TCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTT GGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAAT CTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCT GTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGG TATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTG TCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAA GGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAG CCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCA AATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGT TGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAA ACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATAT GCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACA GTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGG AAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGA TTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCT CCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATAT TCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCA TGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_CHST11_ENST00000547956_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_3819nt GTATGTTGCACCCAGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTG ATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTAT GGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCT ATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGC ATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCA AAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTA TGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTT TTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAA ATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTG CTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTT GGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAG TGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGC AAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAAC AGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCAT CAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTA GTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTA AAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACAT ATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCA CAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAG GGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACA GATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAG CTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAAT ATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACAT CATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATG AAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAG CTATTGTGATGATGATTATTTATTAGTAACTGGTTATGAAGATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGA ACTTGAGTTTGTAAATTGTTCTTAAAATGTATTTGCTGAATTATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTA TATGAGTTCTTCCTTACAGATATAGCTCTTTTATAAAGAAAAACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCT TTTATAAGGGCTGTGTAACCCAGTCATCCTAGAGTTATTGAGATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAA ATGTTCTCTACATTGTAAATGTCCTACCTTTGAGTACTCCTTCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTAT TGGATAATATGTGTGATACTATAATAATTCTAATAGTTATTTGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAA AGAGGCAAGTTTAGAAACTGCTTTTGAACTTTTATTATTTTCCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCT TACCAGGCCAATATATTTGAATATATTTTTGGCCAAAGCACTTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAG CAGTTTATCTTTTAGGTCCCTTTCAGCACTAAGGTTTTGTGTTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAAT GGCTCTAATTTTGCTTTTGCTAAAATTAAAATCTTCATAATTGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGC ACCTTAACAGGACACAAGTTTTAAAATAGTGTTTTAAACATTTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTT TACCTTGAAATTGTATAAACTTTTTTACTATGAAAATATAAGCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATA GGCATTATAAACACTCTGCTACAGGTAACTTGTTTTAAACCTTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATAT ACAGAGCAATAATTGCAGAAAAGATATTTCAAACTAAGAGCTTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACC TTATGCCAGTTTAGGTTGACTGAGTAGCTATGTCCTCAAATTTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTG ATATATATGTGTGTTCCAGTTACTAATTTAAAGTGTATAGAATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAG TATTTGTAATTAATGTGTCTCACTAATTAAGTTTCTCTTGAAGAAAATATGCAAATTGTTAGACACATAATGAGTGGTTTCCAAACTCTA >In-frame_CHST11_ENST00000549260_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_4348nt ATATATAGATCGTTGGAGCGCAATGAAGTAGCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGC GGCGGCGGCACCACCATCACCGCTCGCACCCCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCG GAGCGGCGAGGAGGAGGAGCAGGAGCGCGCAGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCT GCCCGGGCTGGGGGCTCCGAGAGCGGCCGCGAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTC CGGTCCGCGCGGCGGGGTCCCTGCTCCTGCGCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCA GCGCTGCTGGAAGTGATGAGGATGAACAGAATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTC CAAACTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGATGGTACCAGA ATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGGAAAAAAGTG AAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTATTTGTTTGGT GGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCATGGCTCTGGT GTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAAAAAGATTCT GGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATGTCATGGTCA AAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTTGGTGGATGG GTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAATCTGGATACA ACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCTGTTGCAATC GGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGGTATCTTGAT ACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTGTCTACAGTT GAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAAGGAGTCAGG ATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAGCCAGCCACA AAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCAAATGCTTCT AATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGTTGCCTGGAT GTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAAACTGAATCA TCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATATGCACTGCCT GCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCG GGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGGAAGCAAAGC ATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGATTCAGGGTT GCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCTCCTTCTGCA GTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATATTCAGCCTAC TTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCATGTATAGTA ACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAAAAGGGATAT GGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAGCTATTGTGATG ATGATTATTTATTAGTAACTGGTTATGAAGATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGAACTTGAGTTTG TAAATTGTTCTTAAAATGTATTTGCTGAATTATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTATATGAGTTCTT CCTTACAGATATAGCTCTTTTATAAAGAAAAACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCTTTTATAAGGGC TGTGTAACCCAGTCATCCTAGAGTTATTGAGATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAAATGTTCTCTAC ATTGTAAATGTCCTACCTTTGAGTACTCCTTCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTATTGGATAATATG TGTGATACTATAATAATTCTAATAGTTATTTGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAAAGAGGCAAGTT TAGAAACTGCTTTTGAACTTTTATTATTTTCCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCTTACCAGGCCAA TATATTTGAATATATTTTTGGCCAAAGCACTTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAGCAGTTTATCTT TTAGGTCCCTTTCAGCACTAAGGTTTTGTGTTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAATGGCTCTAATTT TGCTTTTGCTAAAATTAAAATCTTCATAATTGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGCACCTTAACAGG ACACAAGTTTTAAAATAGTGTTTTAAACATTTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTTTACCTTGAAAT TGTATAAACTTTTTTACTATGAAAATATAAGCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATAGGCATTATAAA CACTCTGCTACAGGTAACTTGTTTTAAACCTTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATATACAGAGCAATA ATTGCAGAAAAGATATTTCAAACTAAGAGCTTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACCTTATGCCAGTT TAGGTTGACTGAGTAGCTATGTCCTCAAATTTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTGATATATATGTG TGTTCCAGTTACTAATTTAAAGTGTATAGAATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAGTATTTGTAATT AATGTGTCTCACTAATTAAGTTTCTCTTGAAGAAAATATGCAAATTGTTAGACACATAATGAGTGGTTTCCAAACTCTAAAGATAAAATA >In-frame_CHST11_ENST00000303694_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_3819nt GTATGTTGCACCCAGCTACGAATCAGTGGTTTCTGCCAGCTGTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTG ATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATATGGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTAT GGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCTCCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCT ATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAACAATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGC ATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAAGGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCA AAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGAATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTA TGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTTCCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTT TTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACTTCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAA ATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCTCAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTG CTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGAGATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTT GGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTACAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAG TGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGACTTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGC AAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAACATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAAC AGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGACTTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCAT CAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTAAGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTA GTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTATCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTA AAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGATGAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACAT ATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACATGCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCA CAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATTTTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAG GGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCTGACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACA GATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCTTTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAG CTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATCCACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAAT ATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGATAATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACAT CATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATTGATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATG AAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAAGGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAG CTATTGTGATGATGATTATTTATTAGTAACTGGTTATGAAGATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGA ACTTGAGTTTGTAAATTGTTCTTAAAATGTATTTGCTGAATTATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTA TATGAGTTCTTCCTTACAGATATAGCTCTTTTATAAAGAAAAACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCT TTTATAAGGGCTGTGTAACCCAGTCATCCTAGAGTTATTGAGATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAA ATGTTCTCTACATTGTAAATGTCCTACCTTTGAGTACTCCTTCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTAT TGGATAATATGTGTGATACTATAATAATTCTAATAGTTATTTGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAA AGAGGCAAGTTTAGAAACTGCTTTTGAACTTTTATTATTTTCCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCT TACCAGGCCAATATATTTGAATATATTTTTGGCCAAAGCACTTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAG CAGTTTATCTTTTAGGTCCCTTTCAGCACTAAGGTTTTGTGTTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAAT GGCTCTAATTTTGCTTTTGCTAAAATTAAAATCTTCATAATTGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGC ACCTTAACAGGACACAAGTTTTAAAATAGTGTTTTAAACATTTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTT TACCTTGAAATTGTATAAACTTTTTTACTATGAAAATATAAGCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATA GGCATTATAAACACTCTGCTACAGGTAACTTGTTTTAAACCTTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATAT ACAGAGCAATAATTGCAGAAAAGATATTTCAAACTAAGAGCTTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACC TTATGCCAGTTTAGGTTGACTGAGTAGCTATGTCCTCAAATTTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTG ATATATATGTGTGTTCCAGTTACTAATTTAAAGTGTATAGAATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAG TATTTGTAATTAATGTGTCTCACTAATTAAGTTTCTCTTGAAGAAAATATGCAAATTGTTAGACACATAATGAGTGGTTTCCAAACTCTA >In-frame_CHST11_ENST00000546689_chr12_104851292_+_HCFC2_ENST00000229330_chr12_104459945_+_4318nt GCCTTTGGAGAGAAGGGAGAGGGCCCGTCGGACAGCCACAGCGGCCAGCGCAGCGGCAGCGGCGGCGGCACCACCATCACCGCTCGCACC CCAGCCGCCCGGCCCGCGACCAGGCAGCGGCGGCCGCCGGCGGGATCGGAGGAGGCGGCGGAGCGGCGAGGAGGAGGAGCAGGAGCGCGC AGCCAGCGGGTCCACGCATCTCAGCACTTCCAGACCAACTCCGGCACCTTCCACACCCCTGCCCGGGCTGGGGGCTCCGAGAGCGGCCGC GAAGCGACTCCGATCCTCCCTCTGAGCCTTGCTCAGCTCTGCCCCGCGCCTCCCGGGCTCCGGTCCGCGCGGCGGGGTCCCTGCTCCTGC GCCCCGGGCGCGCTTCCCGGACACCCCGGTCCCCGCAGCCAGGACAAAGCCATGAAGCCAGCGCTGCTGGAAGTGATGAGGATGAACAGA ATCTGCCGGATGGTGCTGGCCACTTGCTTGGGATCCTTTATCCTGGTCATCTTCTATTTCCAAACTACGAATCAGTGGTTTCTGCCAGCT GTTAGAGGAGATATCCCTCCAGGCTGTGCTGCCCATGGATTTGTCTGTGATGGTACCAGAATATTAGTATTTGGGGGAATGGTTGAATAT GGAAGATACAGCAATGAGTTATATGAGTTACAAGCAAGTCGTTGGTTATGGAAAAAAGTGAAACCCCATCCCCCTCCTTCTGGTTTACCT CCTTGTCCTCGGCTTGGACATAGCTTCTCTTTATATGGTAACAAATGCTATTTGTTTGGTGGCCTGGCAAACGAAAGCGAAGATTCAAAC AATAATGTTCCCAGATATTTAAATGATTTTTATGAGTTGGAGCTACAGCATGGCTCTGGTGTTGTGGGTTGGAGCATTCCAGTGACTAAA GGGGTTGTGCCTTCTCCAAGAGAATCCCACACAGCTGTTATATATTGCAAAAAAGATTCTGGAAGTCCTAAAATGTATGTTTTTGGTGGA ATGTGTGGTGCTCGCCTGGATGACCTATGGCAGCTTGACTTAGAAACTATGTCATGGTCAAAACCAGAAACTAAAGGGACAGTGCCACTT CCACGAAGCCTTCATACAGCCAGTGTTATAGGAAACAAGATGTACATTTTTGGTGGATGGGTCCCACATAAGGGGGAAAATACTGAGACT TCACCTCATGATTGTGAATGGAGATGTACCAGTTCATTTTCTTACCTAAATCTGGATACAACAGAGTGGACCACCCTAGTATCAGATTCT CAGGAAGATAAAAAAAATTCAAGACCAAGACCAAGAGCTGGCCACTGTGCTGTTGCAATCGGCACTCGATTGTATTTTTGGAGTGGAAGA GATGGCTACAAAAAAGCACTGAATAGTCAAGTTTGCTGCAAGGATCTTTGGTATCTTGATACTGAGAAACCACCGGCACCATCTCAAGTA CAGCTGATCAAAGCCACTACCAACTCCTTTCATGTCAAGTGGGATGAAGTGTCTACAGTTGAGGGCTATCTTTTGCAGTTGAGTACAGAC TTGCCATACCAAGCTGCATCATCAGATTCTTCAGCAGCACCAAATATGCAAGGAGTCAGGATGGACCCTCACAGACAAGGCAGTAATAAC ATCGTTCCTAACAGTATCAATGATACAATAAACAGCACAAAAACTGAACAGCCAGCCACAAAAGAAACTTCAATGAAAAACAAACCAGAC TTTAAAGCACTGACGGATTCTAATGCCATTTTATATCCATCTTTGGCATCAAATGCTTCTAATCATAATAGTCATGTGGTGGATATGCTA AGGAAAAATGAAGGTCCTCACACTTCAGCAAATGTAGGTGTTCTAAGTAGTTGCCTGGATGTAAGAACAGTAATTCCTGAAACATCTGTA TCCAGTACTGTTTCCAGCACACAAACTATGGTAACCCAGCAGACCATTAAAACTGAATCATCCAGTACAAATGGGGCAGTTGTTAAAGAT GAAACTTCACTAACAACATTCAGTACCAAATCTGAAGTTGATGAAACATATGCACTGCCTGCAACGAAGATCAGCCGTGTAGAGACACAT GCTACAGCAACGCCGTTTTCTAAAGAGACTCCTTCAAATCCAGTGGCCACAGTGAAAGCGGGAGAACGACAATGGTGTGATGTGGGAATT TTTAAAAATAATACAGCTTTGGTGAGCCAGTTTTATTTGCTGCCAAAAGGGAAGCAAAGCATCTCAAAGGTAGGAAATGCAGATGTACCT GACTACAGCTTGCTTAAGAAACAAGATCTTGTTCCAGGCACAGGATACAGATTCAGGGTTGCTGCAATCAATGGTTGTGGGATAGGTCCT TTCAGCAAAATCAGTGAATTTAAAACTTGTATTCCTGGTTTTCCTGGAGCTCCTTCTGCAGTCAGAATTTCAAAGAATGTTGAAGGTATC CACCTTTCCTGGGAACCTCCAACCTCACCTTCTGGAAATATTTTGGAATATTCAGCCTACTTGGCTATCCGCACAGCACAGATACAAGAT AATCCAAGTCAACTTGTGTTCATGAGGATTTATTGTGGTCTTAAGACATCATGTATAGTAACTGCTGGGCAACTTGCAAATGCACATATT GATTATACATCCAGGCCTGCCATTGTGTTCAGGATATCAGCAAAGAATGAAAAGGGATATGGACCAGCTACACAAGTTCGGTGGCTTCAA GGTAACAATAAGAAAGCACCTTTAAATTGAATTGGTTTTTTTACTGAAGCTATTGTGATGATGATTATTTATTAGTAACTGGTTATGAAG ATTTGTCATTTAAAAGAGTATTCTCTGGCTGTATTTCCAGCAGTTATGAACTTGAGTTTGTAAATTGTTCTTAAAATGTATTTGCTGAAT TATAGATCCAAATAAAAGAAAAGAAGCAAAGACTCTCTGAAAATTAGTATATGAGTTCTTCCTTACAGATATAGCTCTTTTATAAAGAAA AACAGTGAAATTAAGATAAAAGCTAGAAAGCTTTATTACCCCAATATCTTTTATAAGGGCTGTGTAACCCAGTCATCCTAGAGTTATTGA GATGATTCTGGTAACTGGCTGTTGTATACTATGCTGTCTTATATAGTAAATGTTCTCTACATTGTAAATGTCCTACCTTTGAGTACTCCT TCTATCTTTATTCTATATGAGCAGTGTTCCTCTAACAACTGTCTTCTATTGGATAATATGTGTGATACTATAATAATTCTAATAGTTATT TGATTCCTTTCTTTGTTTACAGTTAGCACAGAGCTTAAGAAATTAAAAAAGAGGCAAGTTTAGAAACTGCTTTTGAACTTTTATTATTTT CCAAGAATCATGGTAAAATACAACAAGAACAATGAGTTTTCTTGATTCTTACCAGGCCAATATATTTGAATATATTTTTGGCCAAAGCAC TTAACTTATCTGGCCCTCATTTTCCTCATAACAGATGAGGGAGTTAAAGCAGTTTATCTTTTAGGTCCCTTTCAGCACTAAGGTTTTGTG TTTTTAGTAGAAGTGAAGTATGTCCCTGAACATTTTCATCTGTCTTAATGGCTCTAATTTTGCTTTTGCTAAAATTAAAATCTTCATAAT TGAATTCAAAATTAAAGTATATGTCCTCCTATTGGAGAAAAAAACAAGCACCTTAACAGGACACAAGTTTTAAAATAGTGTTTTAAACAT TTGTAAGATTTTTGTAAATGCTCTAAATGTTTTATTTTTGCATTGTTTTTACCTTGAAATTGTATAAACTTTTTTACTATGAAAATATAA GCATTAGACAGCTAACTCAGGTTCCATTACAACCTTAAAGATACAGATAGGCATTATAAACACTCTGCTACAGGTAACTTGTTTTAAACC TTTTAGGAATTTCATGGTTCCACTGCCTATTTAAATCTGGAATTAATATACAGAGCAATAATTGCAGAAAAGATATTTCAAACTAAGAGC TTCAATAACTGCAGGGGCACAGGTCTATCTTTTTTTATACCACATAACCTTATGCCAGTTTAGGTTGACTGAGTAGCTATGTCCTCAAAT TTCATGTATGATACCCCCCAGCAAAGATGGATTTAATTGTGCAGAATTGATATATATGTGTGTTCCAGTTACTAATTTAAAGTGTATAGA ATATTTTAATATATAATTTTTGTAAAGAACTGGGATTTTTATACTACAGTATTTGTAATTAATGTGTCTCACTAATTAAGTTTCTCTTGA 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FusionGenePPI for CHST11_HCFC2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| CHST11 | HLA-DPA1, SDF4, YWHAE, SLC2A12, TRIM25 | HCFC2 | HCFC1, KMT2A, MEN1, RBBP5, WDR5, ASH2L, IRF2, THAP2, CREB3, ZNF131, KMT2B, CXXC1, SETD1A, DIDO1, BOD1L1, CCT2, CCT6B, CCT7, TUBA4A, CCT6A, TCP1, CCT5, NFE2L3, HSPA8, NUDCD3, CCT4, CCT3, TUBB8, OGT, KIAA0232, HELZ |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CHST11_HCFC2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CHST11_HCFC2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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