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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 715

FusionGeneSummary for ADAM9_MTL5

check button Fusion gene summary
Fusion gene informationFusion gene name: ADAM9_MTL5
Fusion gene ID: 715
HgeneTgene
Gene symbol

ADAM9

MTL5

Gene ID

8754

9633

Gene nameADAM metallopeptidase domain 9testis expressed metallothionein like protein
SynonymsCORD9|MCMP|MDC9|MltngCXCDC2|MTL5|MTLT
Cytomap

8p11.22

11q13.3

Type of geneprotein-codingprotein-coding
Descriptiondisintegrin and metalloproteinase domain-containing protein 9ADAM metallopeptidase domain 9 (meltrin gamma)cellular disintegrin-related proteincone rod dystrophy 9metalloprotease/disintegrin/cysteine-rich protein 9myeloma cell metalloproteinasetesminCXC domain containing 2metallothionein-like 5, testis-specific (tesmin)testis-specific metallothionein-like protein
Modification date2018051920180329
UniProtAcc

Q13443

Ensembl transtripts involved in fusion geneENST00000487273, ENST00000466936, 
ENST00000481513, ENST00000484143, 
ENST00000255087, ENST00000540869, 
ENST00000443940, ENST00000544963, 
Fusion gene scores* DoF score13 X 7 X 9=8194 X 4 X 4=64
# samples 144
** MAII scorelog2(14/819*10)=-2.54843662469604
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(4/64*10)=-0.678071905112638
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: ADAM9 [Title/Abstract] AND MTL5 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneADAM9

GO:0000186

activation of MAPKK activity

17704059

HgeneADAM9

GO:0006509

membrane protein ectodomain proteolysis

9920899

HgeneADAM9

GO:0034612

response to tumor necrosis factor

11831872

HgeneADAM9

GO:0050714

positive regulation of protein secretion

17704059


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVBLCATCGA-LT-A8JT-01AADAM9chr8

38928922

+MTL5chr11

68483407

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000487273ENST00000255087ADAM9chr8

38928922

+MTL5chr11

68483407

-
5CDS-intronENST00000487273ENST00000540869ADAM9chr8

38928922

+MTL5chr11

68483407

-
5CDS-intronENST00000487273ENST00000443940ADAM9chr8

38928922

+MTL5chr11

68483407

-
5CDS-intronENST00000487273ENST00000544963ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-3CDSENST00000466936ENST00000255087ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000466936ENST00000540869ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000466936ENST00000443940ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000466936ENST00000544963ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-3CDSENST00000481513ENST00000255087ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000481513ENST00000540869ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000481513ENST00000443940ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000481513ENST00000544963ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-3CDSENST00000484143ENST00000255087ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000484143ENST00000540869ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000484143ENST00000443940ADAM9chr8

38928922

+MTL5chr11

68483407

-
intron-intronENST00000484143ENST00000544963ADAM9chr8

38928922

+MTL5chr11

68483407

-

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FusionProtFeatures for ADAM9_MTL5


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
ADAM9

Q13443

MTL5

Cleaves and releases a number of molecules withimportant roles in tumorigenesis and angiogenesis, such as TEK,KDR, EPHB4, CD40, VCAM1 and CDH5. May mediate cell-cell, cell-matrix interactions and regulate the motility of cells viainteractions with integrins. {ECO:0000250|UniProtKB:Q61072}. Isoform 2: May act as alpha-secretase for amyloidprecursor protein (APP). {ECO:0000269|PubMed:12054541}. Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522212_406565820DomainPeptidase M12B
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522414_501565820DomainDisintegrin
TgeneMTL5chr8:38928922chr11:68483407ENST00000443940-05292_405-29252DomainCRC
TgeneMTL5chr8:38928922chr11:68483407ENST00000544963-06292_405-27307DomainCRC

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522505_634565820Compositional biasNote=Cys-rich
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522790_795565820Compositional biasNote=Poly-Pro
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522644_698565820DomainEGF-like
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+152229_697565820Topological domainExtracellular
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522719_819565820Topological domainCytoplasmic
HgeneADAM9chr8:38928922chr11:68483407ENST00000487273+1522698_718565820TransmembraneHelical
TgeneMTL5chr8:38928922chr11:68483407ENST00000255087-510292_405305509DomainCRC


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FusionGeneSequence for ADAM9_MTL5


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_ADAM9_ENST00000487273_chr8_38928922_+_MTL5_ENST00000255087_chr11_68483407_-_769aa
MGSGARFPSGTLRVRWLLLLGLVGPVLGAARPGFQQTSHLSSYEIITPWRLTRERREAPRPYSKQVSYVIQAEGKEHIIHLERNKDLLPE
DFVVYTYNKEGTLITDHPNIQNHCHYRGYVEGVHNSSIALSDCFGLRGLLHLENASYGIEPLQNSSHFEHIIYRMDDVYKEPLKCGVSNK
DIEKETAKDEEEEPPSMTQLLRRRRAVLPQTRYVELFIVVDKERYDMMGRNQTAVREEMILLANYLDSMYIMLNIRIVLVGLEIWTNGNL
INIVGGAGDVLGNFVQWREKFLITRRRHDSAQLVLKKGFGGTAGMAFVGTVCSRSHAGGINVFGQITVETFASIVAHELGHNLGMNHDDG
RDCSCGAKSCIMNSGASGSRNFSSCSAEDFEKLTLNKGGNCLLNIPKPDEAYSAPSCGNKLVDAGEECDCGTPKECELDPCCEGSTCKLK
SFAECAYGDCCKDCRFLPGGTLCRGKTSECDVPEYCNGSSQFCQPDVFIQNGYPCQNNKAYCYNGMCQYYDAQCQVIFGSKAKAAPKDCF
IEVNSKGDRFGNCGFSGNEYKKCATGYCDCFASGDFCNNCNCNNCCNNLHHDIERFKAIKACLGRNPEAFQPKIGKGQLGNVKPQHNKGC
NCRRSGCLKNYCECYEAQIMCSSICKCIGCKNYEESPERKTLMSMPNYMQTGGLEGSHYLPPTKFSGLPRFSHDRRPSSCISWEVVEATC


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_ADAM9_ENST00000487273_chr8_38928922_+_MTL5_ENST00000255087_chr11_68483407_-_2307nt
ATGGGGTCTGGCGCGCGCTTTCCCTCGGGGACCCTTCGTGTCCGGTGGTTGCTGTTGCTTGGCCTGGTGGGCCCAGTCCTCGGTGCGGCG
CGGCCAGGCTTTCAACAGACCTCACATCTTTCTTCTTATGAAATTATAACTCCTTGGAGATTAACTAGAGAAAGAAGAGAAGCCCCTAGG
CCCTATTCAAAACAAGTATCTTATGTTATTCAGGCTGAAGGAAAAGAGCATATTATTCACTTGGAAAGGAACAAAGACCTTTTGCCTGAA
GATTTTGTGGTTTATACTTACAACAAGGAAGGGACTTTAATCACTGACCATCCCAATATACAGAATCATTGTCATTATCGGGGCTATGTG
GAGGGAGTTCATAATTCATCCATTGCTCTTAGCGACTGTTTTGGACTCAGAGGATTGCTGCATTTAGAGAATGCGAGTTATGGGATTGAA
CCCCTGCAGAACAGCTCTCATTTTGAGCACATCATTTATCGAATGGATGATGTCTACAAAGAGCCTCTGAAATGTGGAGTTTCCAACAAG
GATATAGAGAAAGAAACTGCAAAGGATGAAGAGGAAGAGCCTCCCAGCATGACTCAGCTACTTCGAAGAAGAAGAGCTGTCTTGCCACAG
ACCCGGTATGTGGAGCTGTTCATTGTCGTAGACAAGGAAAGGTATGACATGATGGGAAGAAATCAGACTGCTGTGAGAGAAGAGATGATT
CTCCTGGCAAACTACTTGGATAGTATGTATATTATGTTAAATATTCGAATTGTGCTAGTTGGACTGGAGATTTGGACCAATGGAAACCTG
ATCAACATAGTTGGGGGTGCTGGTGATGTGCTGGGGAACTTCGTGCAGTGGCGGGAAAAGTTTCTTATCACACGTCGGAGACATGACAGT
GCACAGCTAGTTCTAAAGAAAGGTTTTGGTGGAACTGCAGGAATGGCATTTGTGGGAACAGTGTGTTCAAGGAGCCACGCAGGCGGGATT
AATGTGTTTGGACAAATCACTGTGGAGACATTTGCTTCCATTGTTGCTCATGAATTGGGTCATAATCTTGGAATGAATCACGATGATGGG
AGAGATTGTTCCTGTGGAGCAAAGAGCTGCATCATGAATTCAGGAGCATCGGGTTCCAGAAACTTTAGCAGTTGCAGTGCAGAGGACTTT
GAGAAGTTAACTTTAAATAAAGGAGGAAACTGCCTTCTTAATATTCCAAAGCCTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAG
TTGGTGGACGCTGGGGAAGAGTGTGACTGTGGTACTCCAAAGGAATGTGAATTGGACCCTTGCTGCGAAGGAAGTACCTGTAAGCTTAAA
TCATTTGCTGAGTGTGCATATGGTGACTGTTGTAAAGACTGTCGGTTCCTTCCAGGAGGTACTTTATGCCGAGGAAAAACCAGTGAGTGT
GATGTTCCAGAGTACTGCAATGGTTCTTCTCAGTTCTGTCAGCCAGATGTTTTTATTCAGAATGGATATCCTTGCCAGAATAACAAAGCC
TATTGCTACAACGGCATGTGCCAGTATTATGATGCTCAATGTCAAGTCATCTTTGGCTCAAAAGCCAAGGCTGCCCCCAAAGATTGTTTC
ATTGAAGTGAATTCTAAAGGTGACAGATTTGGCAATTGTGGTTTCTCTGGCAATGAATACAAGAAGTGTGCCACTGGGTACTGTGACTGC
TTTGCCAGTGGGGACTTTTGCAACAACTGCAATTGTAATAATTGTTGCAACAACTTGCATCATGATATTGAACGGTTTAAAGCCATTAAG
GCATGTCTTGGTAGAAATCCAGAAGCTTTCCAGCCAAAAATTGGGAAGGGCCAATTGGGCAATGTCAAGCCCCAGCACAACAAAGGGTGC
AACTGCAGGAGGTCAGGCTGCCTGAAGAATTACTGCGAGTGCTATGAGGCCCAAATTATGTGTTCTTCTATTTGCAAATGCATTGGTTGC
AAAAATTATGAAGAAAGCCCAGAACGAAAGACACTAATGAGCATGCCAAACTACATGCAGACTGGAGGTTTGGAAGGCAGCCATTACCTG
CCACCAACGAAATTTTCAGGACTTCCAAGATTCAGTCACGATAGGCGGCCTTCCTCATGCATCTCCTGGGAGGTGGTGGAGGCCACATGC
GCCTGCCTGCTTGCTCAGGGAGAAGAGGCCGAGAAAGAACACTGCTCCAAGTGCCTGGCAGAGCAGATGATCCTGGAGGAATTTGGAAGG


* Fusion transcript sequences (Full-length transcript).
>In-frame_ADAM9_ENST00000487273_chr8_38928922_+_MTL5_ENST00000255087_chr11_68483407_-_3253nt
CGGCAGGGTTGGAAAATGATGGAAGAGGCGGAGGTGGAGGCGACCGAGTGCTGAGAGGAACCTGCGGAATCGGCCGAGATGGGGTCTGGC
GCGCGCTTTCCCTCGGGGACCCTTCGTGTCCGGTGGTTGCTGTTGCTTGGCCTGGTGGGCCCAGTCCTCGGTGCGGCGCGGCCAGGCTTT
CAACAGACCTCACATCTTTCTTCTTATGAAATTATAACTCCTTGGAGATTAACTAGAGAAAGAAGAGAAGCCCCTAGGCCCTATTCAAAA
CAAGTATCTTATGTTATTCAGGCTGAAGGAAAAGAGCATATTATTCACTTGGAAAGGAACAAAGACCTTTTGCCTGAAGATTTTGTGGTT
TATACTTACAACAAGGAAGGGACTTTAATCACTGACCATCCCAATATACAGAATCATTGTCATTATCGGGGCTATGTGGAGGGAGTTCAT
AATTCATCCATTGCTCTTAGCGACTGTTTTGGACTCAGAGGATTGCTGCATTTAGAGAATGCGAGTTATGGGATTGAACCCCTGCAGAAC
AGCTCTCATTTTGAGCACATCATTTATCGAATGGATGATGTCTACAAAGAGCCTCTGAAATGTGGAGTTTCCAACAAGGATATAGAGAAA
GAAACTGCAAAGGATGAAGAGGAAGAGCCTCCCAGCATGACTCAGCTACTTCGAAGAAGAAGAGCTGTCTTGCCACAGACCCGGTATGTG
GAGCTGTTCATTGTCGTAGACAAGGAAAGGTATGACATGATGGGAAGAAATCAGACTGCTGTGAGAGAAGAGATGATTCTCCTGGCAAAC
TACTTGGATAGTATGTATATTATGTTAAATATTCGAATTGTGCTAGTTGGACTGGAGATTTGGACCAATGGAAACCTGATCAACATAGTT
GGGGGTGCTGGTGATGTGCTGGGGAACTTCGTGCAGTGGCGGGAAAAGTTTCTTATCACACGTCGGAGACATGACAGTGCACAGCTAGTT
CTAAAGAAAGGTTTTGGTGGAACTGCAGGAATGGCATTTGTGGGAACAGTGTGTTCAAGGAGCCACGCAGGCGGGATTAATGTGTTTGGA
CAAATCACTGTGGAGACATTTGCTTCCATTGTTGCTCATGAATTGGGTCATAATCTTGGAATGAATCACGATGATGGGAGAGATTGTTCC
TGTGGAGCAAAGAGCTGCATCATGAATTCAGGAGCATCGGGTTCCAGAAACTTTAGCAGTTGCAGTGCAGAGGACTTTGAGAAGTTAACT
TTAAATAAAGGAGGAAACTGCCTTCTTAATATTCCAAAGCCTGATGAAGCCTATAGTGCTCCCTCCTGTGGTAATAAGTTGGTGGACGCT
GGGGAAGAGTGTGACTGTGGTACTCCAAAGGAATGTGAATTGGACCCTTGCTGCGAAGGAAGTACCTGTAAGCTTAAATCATTTGCTGAG
TGTGCATATGGTGACTGTTGTAAAGACTGTCGGTTCCTTCCAGGAGGTACTTTATGCCGAGGAAAAACCAGTGAGTGTGATGTTCCAGAG
TACTGCAATGGTTCTTCTCAGTTCTGTCAGCCAGATGTTTTTATTCAGAATGGATATCCTTGCCAGAATAACAAAGCCTATTGCTACAAC
GGCATGTGCCAGTATTATGATGCTCAATGTCAAGTCATCTTTGGCTCAAAAGCCAAGGCTGCCCCCAAAGATTGTTTCATTGAAGTGAAT
TCTAAAGGTGACAGATTTGGCAATTGTGGTTTCTCTGGCAATGAATACAAGAAGTGTGCCACTGGGTACTGTGACTGCTTTGCCAGTGGG
GACTTTTGCAACAACTGCAATTGTAATAATTGTTGCAACAACTTGCATCATGATATTGAACGGTTTAAAGCCATTAAGGCATGTCTTGGT
AGAAATCCAGAAGCTTTCCAGCCAAAAATTGGGAAGGGCCAATTGGGCAATGTCAAGCCCCAGCACAACAAAGGGTGCAACTGCAGGAGG
TCAGGCTGCCTGAAGAATTACTGCGAGTGCTATGAGGCCCAAATTATGTGTTCTTCTATTTGCAAATGCATTGGTTGCAAAAATTATGAA
GAAAGCCCAGAACGAAAGACACTAATGAGCATGCCAAACTACATGCAGACTGGAGGTTTGGAAGGCAGCCATTACCTGCCACCAACGAAA
TTTTCAGGACTTCCAAGATTCAGTCACGATAGGCGGCCTTCCTCATGCATCTCCTGGGAGGTGGTGGAGGCCACATGCGCCTGCCTGCTT
GCTCAGGGAGAAGAGGCCGAGAAAGAACACTGCTCCAAGTGCCTGGCAGAGCAGATGATCCTGGAGGAATTTGGAAGGTGCTTATCACAG
ATTCTCCACACTGAGTTTAAATCTAAGGGATTGAAAATGGAGTAGAGTATAAAGTGTGAATGCATGTTGATTTTGTCTTAGTCTAGAAAT
CTCTAGTTTAGAAAGGATGTTTAGGGGAACATGAGGCTGGCTCTGCAGCAACAACCAGGCTCCCCTGCATCCCTGGGCCCAGGGAGTTTA
CTCAGAGCTCTCTGAAGATGTGGCAACCCATGCCCCCTTTTCTGAGGAGGTGCATGGCCTGAGCATTGTTTGTCTGGCCCAGAGGAGAGA
GCTTGGGTTCCCATAGTCCTGGGAGAGTGTCTGCAGGGCGGCGGAGGGCAGAGCAGGGCAGGGGAGGGCACAGCAGGCCCTGCGAAGGGC
AGAGCGGGGCAGGGGAGGGCAGAGCAGGCCCTGCGGAGAGCTCACTCTGGTCGACTCTTCCTCTCAGAGAATGTTGCTCTGGAGGCTGCT
CTGCATGAAAACCCTAATGGTTTCTTGTTTGTTTTTCAAATTATTTAGAAATAAGTTCTCCGGATGGGCTGTTGTGATACCACTTAAAAT
CTCTAGAGAACTACTGAACACCTAAAGATTTTCTGTAGCGTAGATATTTCCCCAGAGGCACGCGAACTGTCAGTCTTTCCTAAGGCCCCC
GGGAGACGCAGGCAATGGGGCCTCGCAGGCCAGGCTTGCACCAGCATGTCTTGAGTTAGAGGACTTAAAATTATCCAGTTTCTTCTGTGT
TTCTACTTGAATTGTGGAAAAGCTCTATTATCCAATTAACTTCTCCATAATTATTGTTGTAATATTATTATTGTTTGTAAAACATGGTTC
ACATAACTAGCTTGTGGAAACCAGCAGGTAAAATGAATTCTTAAGTTGACGCTTTTGGTTCTGTTGTAAAGCAAAGATGAATAAAAATTT


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FusionGenePPI for ADAM9_MTL5


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
ADAM9MAD2L2, SH3GL2, SNX9, PRKCD, CDH1, RNF2, CD1B, FIGF, TMEM25, PTPRK, GPHA2, CLPSL1, NUDC, KIF2C, ITGAV, ITGB5, SCGB1D4, ADAM32, LYZL2, INSL5, SLAMF1, LYZL1MTL5


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for ADAM9_MTL5


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ADAM9_MTL5


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneADAM9C0033578Prostatic Neoplasms1CTD_human