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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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RelatedDiseases

Fusion gene ID: 6355

FusionGeneSummary for CDC42BPA_ZNF678

check button Fusion gene summary
Fusion gene informationFusion gene name: CDC42BPA_ZNF678
Fusion gene ID: 6355
HgeneTgene
Gene symbol

CDC42BPA

ZNF678

Gene ID

8476

339500

Gene nameCDC42 binding protein kinase alphazinc finger protein 678
SynonymsMRCK|MRCKA|PK428-
Cytomap

1q42.13

1q42.13

Type of geneprotein-codingprotein-coding
Descriptionserine/threonine-protein kinase MRCK alphaCDC42 binding protein kinase alpha (DMPK-like)CDC42 binidng protein kinase betaDMPK-like alphaMRCK alphamyotonic dystrophy kinase-related CDC42-binding kinase alphamyotonic dystrophy kinase-related CDC42-binzinc finger protein 678hypothetical protein MGC42493
Modification date2018051920180403
UniProtAcc

Q5VT25

Q5SXM1

Ensembl transtripts involved in fusion geneENST00000366767, ENST00000366769, 
ENST00000366764, ENST00000334218, 
ENST00000366766, ENST00000535525, 
ENST00000366765, ENST00000488131, 
ENST00000397097, ENST00000343776, 
ENST00000608949, ENST00000465266, 
Fusion gene scores* DoF score11 X 9 X 8=7921 X 1 X 1=1
# samples 111
** MAII scorelog2(11/792*10)=-2.84799690655495
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(1/1*10)=3.32192809488736
Context

PubMed: CDC42BPA [Title/Abstract] AND ZNF678 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneCDC42BPA

GO:0006468

protein phosphorylation

9092543

HgeneCDC42BPA

GO:0031532

actin cytoskeleton reorganization

9418861


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVPRADTCGA-EJ-5499-01ACDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000366767ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000366767ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000366767ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000366767ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
In-frameENST00000366769ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000366769ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000366769ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000366769ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
In-frameENST00000366764ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000366764ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000366764ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000366764ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
In-frameENST00000334218ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000334218ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000334218ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000334218ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
In-frameENST00000366766ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000366766ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000366766ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000366766ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
In-frameENST00000535525ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000535525ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000535525ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000535525ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
In-frameENST00000366765ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-intronENST00000366765ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-5UTRENST00000366765ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
5CDS-3UTRENST00000366765ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
intron-3CDSENST00000488131ENST00000397097CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
intron-intronENST00000488131ENST00000343776CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
intron-5UTRENST00000488131ENST00000608949CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+
intron-3UTRENST00000488131ENST00000465266CDC42BPAchr1

227504706

-ZNF678chr1

227770215

+

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FusionProtFeatures for CDC42BPA_ZNF678


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CDC42BPA

Q5VT25

ZNF678

Q5SXM1

May be involved in transcriptional regulation.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04125_147-115526Zinc fingerC2H2-type 2
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04153_175-115526Zinc fingerC2H2-type 3
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04181_203-115526Zinc fingerC2H2-type 4
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04209_231-115526Zinc fingerC2H2-type 5
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04237_259-115526Zinc fingerC2H2-type 6
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04265_287-115526Zinc fingerC2H2-type 7
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04293_315-115526Zinc fingerC2H2-type 8
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04321_343-115526Zinc fingerC2H2-type 9
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04349_371-115526Zinc fingerC2H2-type 10
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04377_399-115526Zinc fingerC2H2-type 11
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04405_427-115526Zinc fingerC2H2-type 12
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04433_455-115526Zinc fingerC2H2-type 13
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04461_483-115526Zinc fingerC2H2-type 14
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+04489_511-115526Zinc fingerC2H2-type 15%3B degenerate
TgeneZNF678chr1:227504706chr1:227770215ENST00000343776+0497_119-115526Zinc fingerC2H2-type 1

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-137437_820591782Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-137880_943591782Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-135437_820591692Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-135880_943591692Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-137437_820591733Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-137880_943591733Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-137437_820591755Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-137880_943591755Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-135437_820591639Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-135880_943591639Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-136437_820591720Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-136880_943591720Coiled coilOntology_term=ECO:0000255
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-1371082_1201591782DomainPH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-1371227_1499591782DomainCNH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-1371571_1584591782DomainCRIB
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-137344_414591782DomainNote=AGC-kinase C-terminal
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-13777_343591782DomainProtein kinase
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-1351082_1201591692DomainPH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-1351227_1499591692DomainCNH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-1351571_1584591692DomainCRIB
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-135344_414591692DomainNote=AGC-kinase C-terminal
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-13577_343591692DomainProtein kinase
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-1371082_1201591733DomainPH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-1371227_1499591733DomainCNH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-1371571_1584591733DomainCRIB
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-137344_414591733DomainNote=AGC-kinase C-terminal
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-13777_343591733DomainProtein kinase
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-1371082_1201591755DomainPH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-1371227_1499591755DomainCNH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-1371571_1584591755DomainCRIB
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-137344_414591755DomainNote=AGC-kinase C-terminal
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-13777_343591755DomainProtein kinase
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-1351082_1201591639DomainPH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-1351227_1499591639DomainCNH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-1351571_1584591639DomainCRIB
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-135344_414591639DomainNote=AGC-kinase C-terminal
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-13577_343591639DomainProtein kinase
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-1361082_1201591720DomainPH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-1361227_1499591720DomainCNH
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-1361571_1584591720DomainCRIB
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-136344_414591720DomainNote=AGC-kinase C-terminal
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-13677_343591720DomainProtein kinase
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-13783_91591782Nucleotide bindingATP
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-13583_91591692Nucleotide bindingATP
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-13783_91591733Nucleotide bindingATP
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-13783_91591755Nucleotide bindingATP
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-13583_91591639Nucleotide bindingATP
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-13683_91591720Nucleotide bindingATP
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000334218-1371012_1062591782Zinc fingerPhorbol-ester/DAG-type
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366764-1351012_1062591692Zinc fingerPhorbol-ester/DAG-type
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366765-1371012_1062591733Zinc fingerPhorbol-ester/DAG-type
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366766-1371012_1062591755Zinc fingerPhorbol-ester/DAG-type
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366767-1351012_1062591639Zinc fingerPhorbol-ester/DAG-type
HgeneCDC42BPAchr1:227504706chr1:227770215ENST00000366769-1361012_1062591720Zinc fingerPhorbol-ester/DAG-type


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FusionGeneSequence for CDC42BPA_ZNF678


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_CDC42BPA_ENST00000366767_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL

>In-frame_CDC42BPA_ENST00000366769_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL

>In-frame_CDC42BPA_ENST00000366764_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL

>In-frame_CDC42BPA_ENST00000334218_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL

>In-frame_CDC42BPA_ENST00000366766_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL

>In-frame_CDC42BPA_ENST00000535525_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL

>In-frame_CDC42BPA_ENST00000366765_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_630aa
MSGEVRLRQLEQFILDGPAQTNGQCFSVETLLDILICLYDECNNSPLRREKNILEYLEWETHSHYVAQAGLELLPSSDSSAXSSQSSXIT
GTTGIQXCGHRILSRGVGMPGPCPAKFVXGCDVRELQKPGLPGYFILFHSRPFARAGYERFMPKSDTDKTXKLGPXQFALSERLENCEXR
XGAERILQXTYSMFINXKQNLSMYXMWQKFXLEVNPYXTXENSYWREAIQMXRMWQSFQSMFKPNKTXKNSYWRETLQMXRMWQSFXLVV
TTNXPXENSYWRETLQMXXMXQSFXLVVTTNXPXENSXWRETIPMXRMWQSLYPVLKPYTTXENSYWRETLQMQRMLQSLXQVLKPYSTX
ENSYWRETLQVXRMWQRFXXVLTPNXTXENSYWRETLQMXRMWQSLYTVCKPYSSXKNSYWRKTLPMXRMWQNFXSVFTPKXPXENSYWR
ETLQMXRMWQNLYSILKPHSAXKNSYWRETLQMQRMWQSVXQVLKPYSTXENSYWSETLQMXRMWESFXTVLSPNXPXENSYWRETLQMX
RMWQSFLPILNPXXAXENSYXRETLQMXRMWQSLXPVLKPYSSXKNSYWRETLQMXRMWKRFLPILNPXXVXENLYWRGTXQMXKMWQSL


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_CDC42BPA_ENST00000366767_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000366769_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000366764_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000334218_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000366766_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000535525_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000366765_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA


* Fusion transcript sequences (Full-length transcript).
>In-frame_CDC42BPA_ENST00000366767_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1891nt
ATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACA
TTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAG
ACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACA
GGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGA
TGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGA
TTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGG
TAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTT
TAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCG
ATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTC
ACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACT
AACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACA
ACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAA
GAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAAT
TCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATAC
TGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGA
GAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACC
CTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAA
ATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAA
AGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAA
AGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGACAAATGTAAAAAATGTGGCAGTCTTTA

>In-frame_CDC42BPA_ENST00000366769_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_3183nt
TCCGCAAGCCTCCGCCTCTGTGCGGCGGGACTGGAGGAGCCTCGCTGAGCCCAGGGCGCGAGCGCGAGAGGAGAGGGAAGGCGGGGGAGG
GCTGGAAGGGAGAGGAAGGGAGTGGTTGGGAGCCGGGCTGCCGCAGCCTCTAGTCTCCTCAGCCGCGGAAGCGACCCCTCCTCCTGCGCC
GGGCCGCCTCCCTCCTCGCTGTGGAAAGATGCCCTTAGCCCAGGGGTGTGAAGAAGGGGGAGAAGTAGCTGCCAGAGCCGCCCGCGCCGC
CGCCGCAGCTGCTGCTGCTTGTGTCCTTTGAATTCAGAGAAGCACCCCCCCGCCTGGGGCGTCGGGAGCCTCCGGCGCGGCGGCCCGGTG
CGGGTGTCGGGGAGACCGGGCTCTCTGCCCGGCGCGGCGCGGCGCGGCTCGGCCCACGAGCGACCACCGACATGGAGTGGGCTCGGGCGG
CCAAGTAGCCGCTTCTCCGGAGCCCGGTGCCAGTGCCGCCCGCAGCCCGCCTTCCACCCCCGGCCGCGCCGCCGGTCAGGCCCTAGGGTG
AAGCCGGGAGGAAAATGAAGAGTTTTCACCGGAATCCGTTGAAAATAGGACTGACTGCAAAGCCTTAAAGAAAGAAGGACCTCGGGAGGA
GAAACGAAAAGCCGCCTCCGGGCAAGACTTGGCGTGCTCCGAGCCGAGGGGCTGCTTCAGGGACCTCGCCCCCTCCCTTTCCCGCTGGAG
AAATTGCCGCTGATGCATTATCCAAGTGGTGGTTGGGAGGATTTGCAGCAACATTTTTGGTTTTCCCTCCCCCTTCTATGCATTCTGTTT
TTTTCCTCCCTTTTCTGTTTTTCTTCTTCCCGGGAAGTGAATTGCTGATGCAAATCGGACTTTATTCATTAATGATGCAACCGGATTCGT
TTCAGGATTACGTTGCACGAGTTGAATTTTGAATGAAGGAGAAGAGTTTTTTTTTTTTTTTTTAAAGAAGTGTTGACTCTCTAGTTCGTT
GTACTTTTAATTATTATTTTATTTAAATATACGACTTAATTGTATTCTTTTAAAAATGCATTAAGTATATATTTTATGGTAATTTACCCT
CAAAATATATGTATATGGGTGAAATTGAAGACGCTTCAGTTAAGTGAGGTTACTGGTGTGTTGGATGTTTAATTCAGCACCAGCATTGCA
TGACAGTTGTTTGAATAACAAGTGGTTTATTTTTAAAACCATACCTTTTAAAATTTAGGTTCAGATAATAGTAAAAGTCATCATAATAAT
TTAAAGGAAAACCAGCAGAAATCGAAGCAAACATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTC
AGACCAATGGGCAGTGCTTCAGTGTGGAGACATTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAG
AGAAGAACATTCTCGAATACCTAGAATGGGAGACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTT
CTGCCTAATCCTCCCAAAGTTCTTAGATTACAGGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGC
CTGGACCCTGCCCAGCGAAATTTGTATAGGGATGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATT
CAAGACCTTTTGCCAGAGCAGGATATGAAAGATTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCAC
TTAGTGAAAGACTGGAGAACTGTGAATGAAGGTAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAA
ATCTTTCAATGTATTGAATGTGGCAGAAATTTTAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATAC
AAATGTGAAGAATGTGGCAAAGTTTTCAATCGATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGT
GACGAATGTGGCAAAGTTTTTAATTGGTGGTCACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAA
TGTGACAAAGTTTTTAATTGGTGGTCACAACTAACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGC
AAAGCCTTTACCCAGTTCTCAAACCTTACACAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCC
TTTAACAAGTTCTCAAACCTTACTCAACATAAGAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAAT
GAGTGCTCACACCTAACTAGACATAGGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTT
GCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACAC
CTAAGTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACT
CAGCATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACAT
AGGAGAATTCATACTGGAGTGAAACCCTACAAATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGA
ATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCAT
ACTGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGA
GAGAAACGCTACAAATGTAAAGAATGTGGAAAAGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAA

>In-frame_CDC42BPA_ENST00000366764_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_2834nt
GCGGCCCGGTGCGGGTGTCGGGGAGACCGGGCTCTCTGCCCGGCGCGGCGCGGCGCGGCTCGGCCCACGAGCGACCACCGACATGGAGTG
GGCTCGGGCGGCCAAGTAGCCGCTTCTCCGGAGCCCGGTGCCAGTGCCGCCCGCAGCCCGCCTTCCACCCCCGGCCGCGCCGCCGGTCAG
GCCCTAGGGTGAAGCCGGGAGGAAAATGAAGAGTTTTCACCGGAATCCGTTGAAAATAGGACTGACTGCAAAGCCTTAAAGAAAGAAGGA
CCTCGGGAGGAGAAACGAAAAGCCGCCTCCGGGCAAGACTTGGCGTGCTCCGAGCCGAGGGGCTGCTTCAGGGACCTCGCCCCCTCCCTT
TCCCGCTGGAGAAATTGCCGCTGATGCATTATCCAAGTGGTGGTTGGGAGGATTTGCAGCAACATTTTTGGTTTTCCCTCCCCCTTCTAT
GCATTCTGTTTTTTTCCTCCCTTTTCTGTTTTTCTTCTTCCCGGGAAGTGAATTGCTGATGCAAATCGGACTTTATTCATTAATGATGCA
ACCGGATTCGTTTCAGGATTACGTTGCACGAGTTGAATTTTGAATGAAGGAGAAGAGTTTTTTTTTTTTTTTTTAAAGAAGTGTTGACTC
TCTAGTTCGTTGTACTTTTAATTATTATTTTATTTAAATATACGACTTAATTGTATTCTTTTAAAAATGCATTAAGTATATATTTTATGG
TAATTTACCCTCAAAATATATGTATATGGGTGAAATTGAAGACGCTTCAGTTAAGTGAGGTTACTGGTGTGTTGGATGTTTAATTCAGCA
CCAGCATTGCATGACAGTTGTTTGAATAACAAGTGGTTTATTTTTAAAACCATACCTTTTAAAATTTAGGTTCAGATAATAGTAAAAGTC
ATCATAATAATTTAAAGGAAAACCAGCAGAAATCGAAGCAAACATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGA
CGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACATTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCC
ATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAGACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTC
AAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACAGGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGG
AGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGATGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTAT
CTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGATTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTG
ACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGGTAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAA
CTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTTTAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAG
AGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCGATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAAC
CCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTCACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACA
AATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACTAACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTG
AAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAAT
GTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAAGAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCA
ACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCT
TTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATC
GGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCT
CAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCC
TTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAAATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTA
GCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATA
AGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAA
TTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAAAGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATA

>In-frame_CDC42BPA_ENST00000334218_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_2834nt
GCGGCCCGGTGCGGGTGTCGGGGAGACCGGGCTCTCTGCCCGGCGCGGCGCGGCGCGGCTCGGCCCACGAGCGACCACCGACATGGAGTG
GGCTCGGGCGGCCAAGTAGCCGCTTCTCCGGAGCCCGGTGCCAGTGCCGCCCGCAGCCCGCCTTCCACCCCCGGCCGCGCCGCCGGTCAG
GCCCTAGGGTGAAGCCGGGAGGAAAATGAAGAGTTTTCACCGGAATCCGTTGAAAATAGGACTGACTGCAAAGCCTTAAAGAAAGAAGGA
CCTCGGGAGGAGAAACGAAAAGCCGCCTCCGGGCAAGACTTGGCGTGCTCCGAGCCGAGGGGCTGCTTCAGGGACCTCGCCCCCTCCCTT
TCCCGCTGGAGAAATTGCCGCTGATGCATTATCCAAGTGGTGGTTGGGAGGATTTGCAGCAACATTTTTGGTTTTCCCTCCCCCTTCTAT
GCATTCTGTTTTTTTCCTCCCTTTTCTGTTTTTCTTCTTCCCGGGAAGTGAATTGCTGATGCAAATCGGACTTTATTCATTAATGATGCA
ACCGGATTCGTTTCAGGATTACGTTGCACGAGTTGAATTTTGAATGAAGGAGAAGAGTTTTTTTTTTTTTTTTTAAAGAAGTGTTGACTC
TCTAGTTCGTTGTACTTTTAATTATTATTTTATTTAAATATACGACTTAATTGTATTCTTTTAAAAATGCATTAAGTATATATTTTATGG
TAATTTACCCTCAAAATATATGTATATGGGTGAAATTGAAGACGCTTCAGTTAAGTGAGGTTACTGGTGTGTTGGATGTTTAATTCAGCA
CCAGCATTGCATGACAGTTGTTTGAATAACAAGTGGTTTATTTTTAAAACCATACCTTTTAAAATTTAGGTTCAGATAATAGTAAAAGTC
ATCATAATAATTTAAAGGAAAACCAGCAGAAATCGAAGCAAACATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGA
CGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACATTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCC
ATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAGACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTC
AAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACAGGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGG
AGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGATGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTAT
CTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGATTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTG
ACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGGTAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAA
CTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTTTAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAG
AGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCGATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAAC
CCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTCACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACA
AATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACTAACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTG
AAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAAT
GTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAAGAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCA
ACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCT
TTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATC
GGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCT
CAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCC
TTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAAATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTA
GCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATA
AGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAA
TTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAAAGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATA

>In-frame_CDC42BPA_ENST00000366766_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_2834nt
GCGGCCCGGTGCGGGTGTCGGGGAGACCGGGCTCTCTGCCCGGCGCGGCGCGGCGCGGCTCGGCCCACGAGCGACCACCGACATGGAGTG
GGCTCGGGCGGCCAAGTAGCCGCTTCTCCGGAGCCCGGTGCCAGTGCCGCCCGCAGCCCGCCTTCCACCCCCGGCCGCGCCGCCGGTCAG
GCCCTAGGGTGAAGCCGGGAGGAAAATGAAGAGTTTTCACCGGAATCCGTTGAAAATAGGACTGACTGCAAAGCCTTAAAGAAAGAAGGA
CCTCGGGAGGAGAAACGAAAAGCCGCCTCCGGGCAAGACTTGGCGTGCTCCGAGCCGAGGGGCTGCTTCAGGGACCTCGCCCCCTCCCTT
TCCCGCTGGAGAAATTGCCGCTGATGCATTATCCAAGTGGTGGTTGGGAGGATTTGCAGCAACATTTTTGGTTTTCCCTCCCCCTTCTAT
GCATTCTGTTTTTTTCCTCCCTTTTCTGTTTTTCTTCTTCCCGGGAAGTGAATTGCTGATGCAAATCGGACTTTATTCATTAATGATGCA
ACCGGATTCGTTTCAGGATTACGTTGCACGAGTTGAATTTTGAATGAAGGAGAAGAGTTTTTTTTTTTTTTTTTAAAGAAGTGTTGACTC
TCTAGTTCGTTGTACTTTTAATTATTATTTTATTTAAATATACGACTTAATTGTATTCTTTTAAAAATGCATTAAGTATATATTTTATGG
TAATTTACCCTCAAAATATATGTATATGGGTGAAATTGAAGACGCTTCAGTTAAGTGAGGTTACTGGTGTGTTGGATGTTTAATTCAGCA
CCAGCATTGCATGACAGTTGTTTGAATAACAAGTGGTTTATTTTTAAAACCATACCTTTTAAAATTTAGGTTCAGATAATAGTAAAAGTC
ATCATAATAATTTAAAGGAAAACCAGCAGAAATCGAAGCAAACATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGA
CGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACATTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCC
ATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAGACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTC
AAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACAGGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGG
AGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGATGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTAT
CTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGATTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTG
ACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGGTAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAA
CTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTTTAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAG
AGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCGATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAAC
CCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTCACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACA
AATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACTAACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTG
AAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAAT
GTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAAGAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCA
ACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCT
TTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATC
GGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCT
CAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCC
TTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAAATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTA
GCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATA
AGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAA
TTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAAAGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATA

>In-frame_CDC42BPA_ENST00000535525_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_1918nt
GGAAAACCAGCAGAAATCGAAGCAAACATGTCTGGAGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACC
AATGGGCAGTGCTTCAGTGTGGAGACATTACTGGATATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAG
AACATTCTCGAATACCTAGAATGGGAGACGCATTCTCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCC
TAATCCTCCCAAAGTTCTTAGATTACAGGGACTACTGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGA
CCCTGCCCAGCGAAATTTGTATAGGGATGTGATGTTCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGA
CCTTTTGCCAGAGCAGGATATGAAAGATTTATGCCAAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGT
GAAAGACTGGAGAACTGTGAATGAAGGTAAGGGGCAGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTT
TCAATGTATTGAATGTGGCAGAAATTTTAGCTGGAGGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATG
TGAAGAATGTGGCAAAGTTTTCAATCGATGTTCAAACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGA
ATGTGGCAAAGTTTTTAATTGGTGGTCACAACTAACTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGA
CAAAGTTTTTAATTGGTGGTCACAACTAACTAGCCATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGC
CTTTACCCAGTTCTCAAACCTTACACAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAA
CAAGTTCTCAAACCTTACTCAACATAAGAGAATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTG
CTCACACCTAACTAGACATAGGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAG
CCTTACTCGTCATAAAAGAATTCATACTGGAGAAAAACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAG
TAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCA
TAAAAGAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAG
AATTCATACTGGAGTGAAACCCTACAAATGTGAAGAATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCA
TACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGA
AGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAA
ACGCTACAAATGTAAAGAATGTGGAAAAGGTTTTTACCAATCCTCAATCCATAGTAAGTATAAGAGAATTTATACTGGAGAGGAACCTGA

>In-frame_CDC42BPA_ENST00000366765_chr1_227504706_-_ZNF678_ENST00000397097_chr1_227770215_+_2423nt
ATTTGCAGCAACATTTTTGGTTTTCCCTCCCCCTTCTATGCATTCTGTTTTTTTCCTCCCTTTTCTGTTTTTCTTCTTCCCGGGAAGTGA
ATTGCTGATGCAAATCGGACTTTATTCATTAATGATGCAACCGGATTCGTTTCAGGATTACGTTGCACGAGTTGAATTTTGAATGAAGGA
GAAGAGTTTTTTTTTTTTTTTTTAAAGAAGTGTTGACTCTCTAGTTCGTTGTACTTTTAATTATTATTTTATTTAAATATACGACTTAAT
TGTATTCTTTTAAAAATGCATTAAGTATATATTTTATGGTAATTTACCCTCAAAATATATGTATATGGGTGAAATTGAAGACGCTTCAGT
TAAGTGAGGTTACTGGTGTGTTGGATGTTTAATTCAGCACCAGCATTGCATGACAGTTGTTTGAATAACAAGTGGTTTATTTTTAAAACC
ATACCTTTTAAAATTTAGGTTCAGATAATAGTAAAAGTCATCATAATAATTTAAAGGAAAACCAGCAGAAATCGAAGCAAACATGTCTGG
AGAAGTGCGTTTGAGGCAGTTGGAGCAGTTTATTTTGGACGGGCCCGCTCAGACCAATGGGCAGTGCTTCAGTGTGGAGACATTACTGGA
TATACTCATCTGCCTTTATGATGAATGCAATAATTCTCCATTGAGAAGAGAGAAGAACATTCTCGAATACCTAGAATGGGAGACGCATTC
TCACTATGTTGCCCAGGCTGGTCTTGAACTCCTTCCCTCAAGTGATTCTTCTGCCTAATCCTCCCAAAGTTCTTAGATTACAGGGACTAC
TGGCATTCAGTGATGTGGTCATAGAATTCTCTCCAGAGGAGTGGGCATGCCTGGACCCTGCCCAGCGAAATTTGTATAGGGATGTGATGT
TCGAGAACTACAGAAACCTGGTCTCCCTGGCTATTTTATCTTATTCCATTCAAGACCTTTTGCCAGAGCAGGATATGAAAGATTTATGCC
AAAAAGTGACACTGACAAGACATAGAAGCTGGGGCCTTGACAATTTGCACTTAGTGAAAGACTGGAGAACTGTGAATGAAGGTAAGGGGC
AGAAAGAATATTGCAATAGACTTACTCAATGTTCATCAACTAAAAGCAAAATCTTTCAATGTATTGAATGTGGCAGAAATTTTAGCTGGA
GGTCAATCCTTACTGAACATAAGAGAATTCATACTGGAGAGAAGCCATACAAATGTGAAGAATGTGGCAAAGTTTTCAATCGATGTTCAA
ACCTAACAAAACATAAAAGAATTCATACTGGAGAGAAACCCTACAAATGTGACGAATGTGGCAAAGTTTTTAATTGGTGGTCACAACTAA
CTAACCATAAGAAAATTCATACTGGAGAGAAACCCTACAAATGTGATGAATGTGACAAAGTTTTTAATTGGTGGTCACAACTAACTAGCC
ATAAGAAAATTCATAGTGGAGAGAAACCATACCCATGTGAAGAATGTGGCAAAGCCTTTACCCAGTTCTCAAACCTTACACAACATAAGA
GAATTCATACTGGAGAGAAACCCTACAAATGCAAAGAATGTTGCAAAGCCTTTAACAAGTTCTCAAACCTTACTCAACATAAGAGAATTC
ATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAACGTTTTTAATGAGTGCTCACACCTAACTAGACATAGGAGAATTCATACTG
GAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCCTTTACACAGTTTGCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAAA
AACCCTACCAATGTGAAGAATGTGGCAAAACTTTTAATCGGTGTTCACACCTAAGTAGCCATAAGAGAATTCATACTGGAGAGAAACCCT
ACAAATGTGAAGAATGTGGCAGAACCTTTACTCAATTCTCAAACCTCACTCAGCATAAAAGAATTCATACTGGAGAGAAACCCTACAAAT
GCAAAGAATGTGGCAAAGCGTTTAACAAGTTCTCAAGCCTTACTCAACATAGGAGAATTCATACTGGAGTGAAACCCTACAAATGTGAAG
AATGTGGGAAAGTTTTTAAACAGTGCTCTCACCTAACTAGCCATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTG
GCAAAGCTTTTTACCAATCCTCAATCCTTAGTAAGCATAAGAGAATTCATACTGAAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAG
CCTTTAACCAGTTCTCAAGCCTTACTCGTCATAAAAGAATTCATACTGGAGAGAAACGCTACAAATGTAAAGAATGTGGAAAAGGTTTTT


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FusionGenePPI for CDC42BPA_ZNF678


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
CDC42BPACDC42, LGR4, KCTD17, FAM212B, LURAP1L, NTRK1, HDAC1, TGM2, KIF20B, RBM8A, CTDSPL2, CENPQ, SKA3, PTPRM, FAM167A, RPL28, FCGR1A, PPM1A, INO80BZNF678


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for CDC42BPA_ZNF678


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CDC42BPA_ZNF678


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource