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Fusion gene ID: 5884 |
FusionGeneSummary for CCDC64_GALNT9 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CCDC64_GALNT9 | Fusion gene ID: 5884 | Hgene | Tgene | Gene symbol | CCDC64 | GALNT9 | Gene ID | 92558 | 50614 |
| Gene name | BICD family like cargo adaptor 1 | polypeptide N-acetylgalactosaminyltransferase 9 | |
| Synonyms | BICDR-1|BICDR1|CCDC64|CCDC64A|H_267D11.1 | GALNAC-T9|GALNACT9 | |
| Cytomap | 12q24.23 | 12q24.33 | |
| Type of gene | protein-coding | protein-coding | |
| Description | BICD family-like cargo adapter 1BICD-related protein 1Bicaudal D related 1WUGSC:H_267D11.1bicaudal D-related protein 1coiled-coil domain containing 64coiled-coil domain-containing protein 64A | polypeptide N-acetylgalactosaminyltransferase 9GalNAc transferase 9UDP-GalNAc: polypeptide N-acetylgalactosaminyltransferase 9UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)polypeptide GalNAc transferase | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q9HCQ5 | ||
| Ensembl transtripts involved in fusion gene | ENST00000397558, ENST00000446727, ENST00000257583, ENST00000546857, | ENST00000535228, ENST00000328957, ENST00000397325, ENST00000541995, ENST00000535208, | |
| Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 4 X 3 X 4=48 |
| # samples | 2 | 4 | |
| ** MAII score | log2(2/8*10)=1.32192809488736 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: CCDC64 [Title/Abstract] AND GALNT9 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | BRCA | TCGA-B6-A0RH-01A | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000397558 | ENST00000535228 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| In-frame | ENST00000397558 | ENST00000328957 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| 5CDS-5UTR | ENST00000397558 | ENST00000397325 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| 5CDS-5UTR | ENST00000397558 | ENST00000541995 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| 5CDS-intron | ENST00000397558 | ENST00000535208 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-3CDS | ENST00000446727 | ENST00000535228 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-3CDS | ENST00000446727 | ENST00000328957 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-5UTR | ENST00000446727 | ENST00000397325 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-5UTR | ENST00000446727 | ENST00000541995 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-intron | ENST00000446727 | ENST00000535208 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-3CDS | ENST00000257583 | ENST00000535228 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-3CDS | ENST00000257583 | ENST00000328957 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-5UTR | ENST00000257583 | ENST00000397325 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-5UTR | ENST00000257583 | ENST00000541995 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-intron | ENST00000257583 | ENST00000535208 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-3CDS | ENST00000546857 | ENST00000535228 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-3CDS | ENST00000546857 | ENST00000328957 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-5UTR | ENST00000546857 | ENST00000397325 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-5UTR | ENST00000546857 | ENST00000541995 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
| intron-intron | ENST00000546857 | ENST00000535208 | CCDC64 | chr12 | 120436540 | + | GALNT9 | chr12 | 132688235 | - |
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FusionProtFeatures for CCDC64_GALNT9 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CCDC64 | GALNT9 |
| Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. | Catalyzes the initial reaction in O-linkedoligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on theprotein receptor. Does not glycosylate apomucin or SDC3.{ECO:0000269|PubMed:10978536, ECO:0000269|PubMed:12407114}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000397325 | - | 1 | 7 | 464_600 | -7 | 238 | Domain | Ricin B-type lectin |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000541995 | - | 0 | 6 | 464_600 | -7 | 238 | Domain | Ricin B-type lectin |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000397325 | - | 1 | 7 | 150_261 | -7 | 238 | Region | Note=Catalytic subdomain A |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000397325 | - | 1 | 7 | 318_380 | -7 | 238 | Region | Note=Catalytic subdomain B |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000541995 | - | 0 | 6 | 150_261 | -7 | 238 | Region | Note=Catalytic subdomain A |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000541995 | - | 0 | 6 | 318_380 | -7 | 238 | Region | Note=Catalytic subdomain B |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000397325 | - | 1 | 7 | 1_6 | -7 | 238 | Topological domain | Cytoplasmic |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000397325 | - | 1 | 7 | 30_603 | -7 | 238 | Topological domain | Lumenal |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000541995 | - | 0 | 6 | 1_6 | -7 | 238 | Topological domain | Cytoplasmic |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000541995 | - | 0 | 6 | 30_603 | -7 | 238 | Topological domain | Lumenal |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000397325 | - | 1 | 7 | 7_29 | -7 | 238 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| Tgene | >GALNT9 | chr12:120436540 | chr12:132688235 | ENST00000541995 | - | 0 | 6 | 7_29 | -7 | 238 | Transmembrane | Helical%3B Signal-anchor for type II membrane protein |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >CCDC64 | chr12:120436540 | chr12:132688235 | ENST00000397558 | + | 2 | 9 | 118_376 | 215 | 574 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >CCDC64 | chr12:120436540 | chr12:132688235 | ENST00000397558 | + | 2 | 9 | 440_525 | 215 | 574 | Coiled coil | Ontology_term=ECO:0000255 |
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FusionGeneSequence for CCDC64_GALNT9 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_CCDC64_ENST00000397558_chr12_120436540_+_GALNT9_ENST00000535228_chr12_132688235_-_460aa MSAFCLGLVGRASAPAEPDSACCMELPAAAGDAVRSPAAAAALIFPGGSGELELALEEELALLAAGERPSDPGEHPQAEPGSLAEGAGPQ PPPSQDPELLSVIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELESDVKQLQDE LERQQIHLREADREKSRAVQELSEQNQRLLDQLSRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYM AWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEMRVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYS ADGLLQLGPLGSTAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDANFGLRLVVQRCSGQKWMI >In-frame_CCDC64_ENST00000397558_chr12_120436540_+_GALNT9_ENST00000328957_chr12_132688235_-_460aa MSAFCLGLVGRASAPAEPDSACCMELPAAAGDAVRSPAAAAALIFPGGSGELELALEEELALLAAGERPSDPGEHPQAEPGSLAEGAGPQ PPPSQDPELLSVIRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELESDVKQLQDE LERQQIHLREADREKSRAVQELSEQNQRLLDQLSRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDDFKSHVYM AWNIPMSNPGVDFGDVSERLALRQRLKCRSFKWYLENVYPEMRVYNNTLTYGEVRNSKASAYCLDQGAEDGDRAILYPCHGMSSQLVRYS ADGLLQLGPLGSTAFLPDSKCLVDDGTGRMPTLKKCEDVARPTQRLWDFTQSGPIVSRATGRCLEVEMSKDANFGLRLVVQRCSGQKWMI |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_CCDC64_ENST00000397558_chr12_120436540_+_GALNT9_ENST00000535228_chr12_132688235_-_1380nt ATGTCCGCTTTCTGCCTGGGCTTGGTCGGCCGCGCTTCAGCACCCGCCGAGCCGGACAGCGCCTGCTGCATGGAGCTGCCCGCCGCGGCC GGGGACGCAGTCCGGAGTCCCGCCGCCGCCGCCGCCCTCATCTTCCCCGGGGGCTCCGGGGAGCTAGAACTGGCGTTAGAGGAGGAGCTG GCGCTGCTGGCGGCCGGGGAGCGGCCGTCCGACCCCGGGGAACACCCTCAGGCCGAGCCTGGGTCTCTGGCCGAGGGGGCCGGACCGCAG CCGCCGCCCTCCCAGGACCCCGAGCTGCTGTCGGTGATCCGACAGAAGGAGAAGGATCTGGTGTTGGCGGCCCGGCTGGGTAAGGCGCTG CTCGAGAGGAACCAGGACATGAGCCGGCAGTACGAGCAGATGCATAAGGAGCTGACAGACAAGCTCGAGCACTTAGAGCAAGAGAAACAT GAATTGAGAAGACGATTTGAGAACCGAGAAGGGGAGTGGGAAGGCCGAGTGTCAGAGCTGGAGAGTGATGTGAAGCAGCTACAGGATGAG TTGGAGAGGCAGCAGATTCATCTGCGGGAAGCAGATCGAGAAAAATCACGGGCTGTCCAGGAACTGTCGGAACAGAACCAAAGGCTATTG GATCAGCTCAGCAGGGTGTGGCAGTGTGGCGGCAGCATGGAGGTGCTGCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAGGAAGCCC TACAACAACGACATTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCGCCGAGGTGTGGATGGATGACTTCAAGTCCCACGTGTACATG GCCTGGAACATCCCCATGTCGAACCCAGGGGTGGACTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCAGC TTCAAGTGGTACCTGGAGAACGTGTACCCGGAGATGAGGGTCTACAACAACACCCTCACGTACGGAGAGGTGAGAAACAGCAAAGCCAGT GCCTACTGTCTGGACCAGGGAGCGGAGGACGGCGACCGGGCGATCCTCTACCCCTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAGC GCTGATGGACTGCTGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATG CCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGTGAGCCGGGCCACG GGCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGGGCAGAAGTGGATGATC >In-frame_CCDC64_ENST00000397558_chr12_120436540_+_GALNT9_ENST00000328957_chr12_132688235_-_1380nt ATGTCCGCTTTCTGCCTGGGCTTGGTCGGCCGCGCTTCAGCACCCGCCGAGCCGGACAGCGCCTGCTGCATGGAGCTGCCCGCCGCGGCC GGGGACGCAGTCCGGAGTCCCGCCGCCGCCGCCGCCCTCATCTTCCCCGGGGGCTCCGGGGAGCTAGAACTGGCGTTAGAGGAGGAGCTG GCGCTGCTGGCGGCCGGGGAGCGGCCGTCCGACCCCGGGGAACACCCTCAGGCCGAGCCTGGGTCTCTGGCCGAGGGGGCCGGACCGCAG CCGCCGCCCTCCCAGGACCCCGAGCTGCTGTCGGTGATCCGACAGAAGGAGAAGGATCTGGTGTTGGCGGCCCGGCTGGGTAAGGCGCTG CTCGAGAGGAACCAGGACATGAGCCGGCAGTACGAGCAGATGCATAAGGAGCTGACAGACAAGCTCGAGCACTTAGAGCAAGAGAAACAT GAATTGAGAAGACGATTTGAGAACCGAGAAGGGGAGTGGGAAGGCCGAGTGTCAGAGCTGGAGAGTGATGTGAAGCAGCTACAGGATGAG TTGGAGAGGCAGCAGATTCATCTGCGGGAAGCAGATCGAGAAAAATCACGGGCTGTCCAGGAACTGTCGGAACAGAACCAAAGGCTATTG GATCAGCTCAGCAGGGTGTGGCAGTGTGGCGGCAGCATGGAGGTGCTGCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAGGAAGCCC TACAACAACGACATTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCGCCGAGGTGTGGATGGATGACTTCAAGTCCCACGTGTACATG GCCTGGAACATCCCCATGTCGAACCCAGGGGTGGACTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCAGC TTCAAGTGGTACCTGGAGAACGTGTACCCGGAGATGAGGGTCTACAACAACACCCTCACGTACGGAGAGGTGAGAAACAGCAAAGCCAGT GCCTACTGTCTGGACCAGGGAGCGGAGGACGGCGACCGGGCGATCCTCTACCCCTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAGC GCTGATGGACTGCTGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATG CCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGTGAGCCGGGCCACG GGCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGGGCAGAAGTGGATGATC |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_CCDC64_ENST00000397558_chr12_120436540_+_GALNT9_ENST00000535228_chr12_132688235_-_1978nt ATGTCCGCTTTCTGCCTGGGCTTGGTCGGCCGCGCTTCAGCACCCGCCGAGCCGGACAGCGCCTGCTGCATGGAGCTGCCCGCCGCGGCC GGGGACGCAGTCCGGAGTCCCGCCGCCGCCGCCGCCCTCATCTTCCCCGGGGGCTCCGGGGAGCTAGAACTGGCGTTAGAGGAGGAGCTG GCGCTGCTGGCGGCCGGGGAGCGGCCGTCCGACCCCGGGGAACACCCTCAGGCCGAGCCTGGGTCTCTGGCCGAGGGGGCCGGACCGCAG CCGCCGCCCTCCCAGGACCCCGAGCTGCTGTCGGTGATCCGACAGAAGGAGAAGGATCTGGTGTTGGCGGCCCGGCTGGGTAAGGCGCTG CTCGAGAGGAACCAGGACATGAGCCGGCAGTACGAGCAGATGCATAAGGAGCTGACAGACAAGCTCGAGCACTTAGAGCAAGAGAAACAT GAATTGAGAAGACGATTTGAGAACCGAGAAGGGGAGTGGGAAGGCCGAGTGTCAGAGCTGGAGAGTGATGTGAAGCAGCTACAGGATGAG TTGGAGAGGCAGCAGATTCATCTGCGGGAAGCAGATCGAGAAAAATCACGGGCTGTCCAGGAACTGTCGGAACAGAACCAAAGGCTATTG GATCAGCTCAGCAGGGTGTGGCAGTGTGGCGGCAGCATGGAGGTGCTGCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAGGAAGCCC TACAACAACGACATTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCGCCGAGGTGTGGATGGATGACTTCAAGTCCCACGTGTACATG GCCTGGAACATCCCCATGTCGAACCCAGGGGTGGACTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCAGC TTCAAGTGGTACCTGGAGAACGTGTACCCGGAGATGAGGGTCTACAACAACACCCTCACGTACGGAGAGGTGAGAAACAGCAAAGCCAGT GCCTACTGTCTGGACCAGGGAGCGGAGGACGGCGACCGGGCGATCCTCTACCCCTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAGC GCTGATGGACTGCTGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATG CCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGTGAGCCGGGCCACG GGCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGGGCAGAAGTGGATGATC AGAAACTGGATCAAACACGCACGGCACTGACCCCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGC TGAGTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGGGGCCGGGGTGTGGCTG AGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCGAGGGAGGGCGTCTGGGGACAGTGAT GCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCCCACGC CCCATAGGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC CAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAG >In-frame_CCDC64_ENST00000397558_chr12_120436540_+_GALNT9_ENST00000328957_chr12_132688235_-_1978nt ATGTCCGCTTTCTGCCTGGGCTTGGTCGGCCGCGCTTCAGCACCCGCCGAGCCGGACAGCGCCTGCTGCATGGAGCTGCCCGCCGCGGCC GGGGACGCAGTCCGGAGTCCCGCCGCCGCCGCCGCCCTCATCTTCCCCGGGGGCTCCGGGGAGCTAGAACTGGCGTTAGAGGAGGAGCTG GCGCTGCTGGCGGCCGGGGAGCGGCCGTCCGACCCCGGGGAACACCCTCAGGCCGAGCCTGGGTCTCTGGCCGAGGGGGCCGGACCGCAG CCGCCGCCCTCCCAGGACCCCGAGCTGCTGTCGGTGATCCGACAGAAGGAGAAGGATCTGGTGTTGGCGGCCCGGCTGGGTAAGGCGCTG CTCGAGAGGAACCAGGACATGAGCCGGCAGTACGAGCAGATGCATAAGGAGCTGACAGACAAGCTCGAGCACTTAGAGCAAGAGAAACAT GAATTGAGAAGACGATTTGAGAACCGAGAAGGGGAGTGGGAAGGCCGAGTGTCAGAGCTGGAGAGTGATGTGAAGCAGCTACAGGATGAG TTGGAGAGGCAGCAGATTCATCTGCGGGAAGCAGATCGAGAAAAATCACGGGCTGTCCAGGAACTGTCGGAACAGAACCAAAGGCTATTG GATCAGCTCAGCAGGGTGTGGCAGTGTGGCGGCAGCATGGAGGTGCTGCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAGGAAGCCC TACAACAACGACATTGACTACTATGCCAAGCGCAACGCCCTGCGCGCCGCCGAGGTGTGGATGGATGACTTCAAGTCCCACGTGTACATG GCCTGGAACATCCCCATGTCGAACCCAGGGGTGGACTTCGGGGACGTGTCTGAGAGGCTGGCCCTGCGTCAGAGGCTGAAGTGTCGCAGC TTCAAGTGGTACCTGGAGAACGTGTACCCGGAGATGAGGGTCTACAACAACACCCTCACGTACGGAGAGGTGAGAAACAGCAAAGCCAGT GCCTACTGTCTGGACCAGGGAGCGGAGGACGGCGACCGGGCGATCCTCTACCCCTGCCACGGGATGTCCTCCCAGCTGGTGCGGTACAGC GCTGATGGACTGCTGCAGCTGGGGCCTCTGGGCTCCACAGCCTTCTTGCCTGACTCCAAGTGTCTGGTGGATGACGGCACGGGCCGCATG CCCACCCTGAAGAAGTGTGAGGATGTGGCGCGGCCAACACAGCGGCTGTGGGACTTCACCCAGAGTGGCCCCATTGTGAGCCGGGCCACG GGCCGCTGCCTGGAGGTGGAGATGTCCAAAGATGCCAACTTTGGGCTCCGGCTGGTGGTACAGAGGTGCTCGGGGCAGAAGTGGATGATC AGAAACTGGATCAAACACGCACGGCACTGACCCCACCTCCGCCCGGACCCCCACAGACCTCGGGAAGGCGCTGGGCCGAGCCAGTGTGGC TGAGTGACCGGGGTGTGCCCGGCAGACACAGCAGGACAGGGCTCTATGTGCGGCCAGGACAGCAGAGGCTGAGGGGCCGGGGTGTGGCTG AGTGACCAGGGTGTCACCCACTGCATCTGGAGTACAGCTTCTCCTAGGACAGGCGGCTCTACCCGAGGGAGGGCGTCTGGGGACAGTGAT GCCAACTCAAACACGTGCCTTCTCCACGGTATCTCCTGGCCAGGCTGCTGGGACAGCCGCCGCCTCTGCATGTACCACAGCCCCCCACGC CCCATAGGGAGGCCAAGCCCCGGACCATGCACCAGGCTGCACCCTGGTGTCTTCCACCCGCAGGCCTCCCATGCTCCAAGCAGCCTCCCC CAGCACTTGCGGCCGCTCAGCCCTCCAACCAAGACCTAAGTCACACATCATAATGCAGCTCCTTGTGGTCTGGTAAGAGGGGTGCTGGAG |
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FusionGenePPI for CCDC64_GALNT9 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| CCDC64 | HSPB1 | GALNT9 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CCDC64_GALNT9 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CCDC64_GALNT9 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
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