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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 5850

FusionGeneSummary for CCDC40_ANAPC11

check button Fusion gene summary
Fusion gene informationFusion gene name: CCDC40_ANAPC11
Fusion gene ID: 5850
HgeneTgene
Gene symbol

CCDC40

ANAPC11

Gene ID

55036

51529

Gene namecoiled-coil domain containing 40anaphase promoting complex subunit 11
SynonymsCILD15|FAP172APC11|Apc11p|HSPC214
Cytomap

17q25.3

17q25.3

Type of geneprotein-codingprotein-coding
Descriptioncoiled-coil domain-containing protein 40anaphase-promoting complex subunit 11APC11 anaphase promoting complex subunit 11 homologanaphase promoting complex subunit 11 (yeast APC11 homolog)cyclosome subunit 11hepatocellular carcinoma-associated RING finger protein
Modification date2018052320180523
UniProtAcc

Q4G0X9

Q9NYG5

Ensembl transtripts involved in fusion geneENST00000374877, ENST00000397545, 
ENST00000269318, ENST00000374876, 
ENST00000573903, 
ENST00000571570, 
ENST00000572639, ENST00000579978, 
ENST00000344877, ENST00000582222, 
ENST00000577425, ENST00000571024, 
ENST00000574924, ENST00000572851, 
ENST00000357385, ENST00000584314, 
ENST00000571874, ENST00000578550, 
ENST00000577747, ENST00000579133, 
ENST00000392376, ENST00000583839, 
ENST00000578544, ENST00000575195, 
Fusion gene scores* DoF score2 X 1 X 2=42 X 2 X 2=8
# samples 22
** MAII scorelog2(2/4*10)=2.32192809488736log2(2/8*10)=1.32192809488736
Context

PubMed: CCDC40 [Title/Abstract] AND ANAPC11 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
TgeneANAPC11

GO:0016567

protein ubiquitination

11739784

TgeneANAPC11

GO:0070979

protein K11-linked ubiquitination

18485873


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDBRCATCGA-BH-A0H7-01ACCDC40chr17

78011985

+ANAPC11chr17

79857796

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
Frame-shiftENST00000374877ENST00000571570CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000374877ENST00000572639CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000374877ENST00000579978CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
In-frameENST00000374877ENST00000344877CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374877ENST00000582222CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000577425CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000571024CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000574924CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000572851CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000357385CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374877ENST00000584314CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374877ENST00000571874CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374877ENST00000578550CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374877ENST00000577747CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000579133CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000392376CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000583839CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000578544CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374877ENST00000575195CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000397545ENST00000571570CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000397545ENST00000572639CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000397545ENST00000579978CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
In-frameENST00000397545ENST00000344877CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000397545ENST00000582222CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000577425CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000571024CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000574924CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000572851CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000357385CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000397545ENST00000584314CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000397545ENST00000571874CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000397545ENST00000578550CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000397545ENST00000577747CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000579133CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000392376CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000583839CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000578544CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000397545ENST00000575195CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000269318ENST00000571570CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000269318ENST00000572639CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000269318ENST00000579978CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
In-frameENST00000269318ENST00000344877CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000269318ENST00000582222CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000577425CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000571024CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000574924CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000572851CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000357385CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000269318ENST00000584314CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000269318ENST00000571874CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000269318ENST00000578550CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000269318ENST00000577747CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000579133CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000392376CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000583839CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000578544CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000269318ENST00000575195CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000374876ENST00000571570CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000374876ENST00000572639CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
Frame-shiftENST00000374876ENST00000579978CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
In-frameENST00000374876ENST00000344877CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374876ENST00000582222CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000577425CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000571024CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000574924CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000572851CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000357385CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374876ENST00000584314CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374876ENST00000571874CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374876ENST00000578550CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-intronENST00000374876ENST00000577747CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000579133CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000392376CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000583839CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000578544CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
5CDS-3UTRENST00000374876ENST00000575195CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3CDSENST00000573903ENST00000571570CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3CDSENST00000573903ENST00000572639CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3CDSENST00000573903ENST00000579978CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3CDSENST00000573903ENST00000344877CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-intronENST00000573903ENST00000582222CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000577425CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000571024CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000574924CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000572851CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000357385CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-intronENST00000573903ENST00000584314CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-intronENST00000573903ENST00000571874CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-intronENST00000573903ENST00000578550CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-intronENST00000573903ENST00000577747CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000579133CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000392376CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000583839CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000578544CCDC40chr17

78011985

+ANAPC11chr17

79857796

+
intron-3UTRENST00000573903ENST00000575195CCDC40chr17

78011985

+ANAPC11chr17

79857796

+

Top

FusionProtFeatures for CCDC40_ANAPC11


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
CCDC40

Q4G0X9

ANAPC11

Q9NYG5

Together with the cullin protein ANAPC2, constitutes thecatalytic component of the anaphase promoting complex/cyclosome(APC/C), a cell cycle-regulated E3 ubiquitin ligase that controlsprogression through mitosis and the G1 phase of the cell cycle.The APC/C complex acts by mediating ubiquitination and subsequentdegradation of target proteins: it mainly mediates the formationof 'Lys-11'-linked polyubiquitin chains and, to a lower extent,the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitinchains. May recruit the E2 ubiquitin-conjugating enzymes to thecomplex. {ECO:0000269|PubMed:11739784,ECO:0000269|PubMed:18485873}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for CCDC40_ANAPC11


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_CCDC40_ENST00000374877_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_79aa

>In-frame_CCDC40_ENST00000397545_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_79aa

>In-frame_CCDC40_ENST00000269318_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_79aa

>In-frame_CCDC40_ENST00000374876_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_79aa


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_CCDC40_ENST00000374877_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_239nt
ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCAC
ATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACATGCATTGCATCCTCAAGTGGCTGCACG

>In-frame_CCDC40_ENST00000397545_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_239nt
ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCAC
ATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACATGCATTGCATCCTCAAGTGGCTGCACG

>In-frame_CCDC40_ENST00000269318_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_239nt
ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCAC
ATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACATGCATTGCATCCTCAAGTGGCTGCACG

>In-frame_CCDC40_ENST00000374876_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_239nt
ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCAC
ATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACATGCATTGCATCCTCAAGTGGCTGCACG


* Fusion transcript sequences (Full-length transcript).
>In-frame_CCDC40_ENST00000374877_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_734nt
GTTGACAGCGTCGCCTAGCAACGGGAAATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGA
GAGAAGGAAGGGAATAATGAAAGCCACATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACA
TGCATTGCATCCTCAAGTGGCTGCACGCACAGCAGGTGCAGCAGCACTGCCCCATGTGCCGCCAGGAATGGAAGTTCAAGGAGTGAGGCC
CGACCTGGCTCTCGCTGGAGGGGCATCCTGAGACTCCTTCCTCATGCTGGCGCCGATGGCTGCTGGGGACAGCGCCCCTGAGCTGCAACA
AGGTGGAAACAAGGGCTGGAGCTGCGTTTGTTTTGCCATCACTATGTTGACACTTTTATCCAATAAGTGAAAACTCATTAAACTACTCAA
ATCTTGCTGGAGGCCTCTGGGTGCCTGTGTTCTCGGCATATAGATGTGGTCTCGGTGTGTTTTGATATGAAAACTCTCATGAATAAACAT
CTCCGTGAAACGCCAAGGCCCTCGTCAAACCCTGAGTCATGACTGGGAGGAGAAGGAGCAGGATCAGACGGTAGAGCCTGGGGCATGCTC
TTCAGGCATGCTCTTGCCTGCTGGATTGCCGGCGGCGGCCCTGGGACCCTCCCTCAGGCTGGCTCTGAGGGACCCTGGCTGTGCAAAGCT

>In-frame_CCDC40_ENST00000397545_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_734nt
GTTGACAGCGTCGCCTAGCAACGGGAAATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGA
GAGAAGGAAGGGAATAATGAAAGCCACATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACA
TGCATTGCATCCTCAAGTGGCTGCACGCACAGCAGGTGCAGCAGCACTGCCCCATGTGCCGCCAGGAATGGAAGTTCAAGGAGTGAGGCC
CGACCTGGCTCTCGCTGGAGGGGCATCCTGAGACTCCTTCCTCATGCTGGCGCCGATGGCTGCTGGGGACAGCGCCCCTGAGCTGCAACA
AGGTGGAAACAAGGGCTGGAGCTGCGTTTGTTTTGCCATCACTATGTTGACACTTTTATCCAATAAGTGAAAACTCATTAAACTACTCAA
ATCTTGCTGGAGGCCTCTGGGTGCCTGTGTTCTCGGCATATAGATGTGGTCTCGGTGTGTTTTGATATGAAAACTCTCATGAATAAACAT
CTCCGTGAAACGCCAAGGCCCTCGTCAAACCCTGAGTCATGACTGGGAGGAGAAGGAGCAGGATCAGACGGTAGAGCCTGGGGCATGCTC
TTCAGGCATGCTCTTGCCTGCTGGATTGCCGGCGGCGGCCCTGGGACCCTCCCTCAGGCTGGCTCTGAGGGACCCTGGCTGTGCAAAGCT

>In-frame_CCDC40_ENST00000269318_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_718nt
AGCAACGGGAAATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATA
ATGAAAGCCACATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACATGCATTGCATCCTCAA
GTGGCTGCACGCACAGCAGGTGCAGCAGCACTGCCCCATGTGCCGCCAGGAATGGAAGTTCAAGGAGTGAGGCCCGACCTGGCTCTCGCT
GGAGGGGCATCCTGAGACTCCTTCCTCATGCTGGCGCCGATGGCTGCTGGGGACAGCGCCCCTGAGCTGCAACAAGGTGGAAACAAGGGC
TGGAGCTGCGTTTGTTTTGCCATCACTATGTTGACACTTTTATCCAATAAGTGAAAACTCATTAAACTACTCAAATCTTGCTGGAGGCCT
CTGGGTGCCTGTGTTCTCGGCATATAGATGTGGTCTCGGTGTGTTTTGATATGAAAACTCTCATGAATAAACATCTCCGTGAAACGCCAA
GGCCCTCGTCAAACCCTGAGTCATGACTGGGAGGAGAAGGAGCAGGATCAGACGGTAGAGCCTGGGGCATGCTCTTCAGGCATGCTCTTG

>In-frame_CCDC40_ENST00000374876_chr17_78011985_+_ANAPC11_ENST00000344877_chr17_79857796_+_712nt
GGGAAATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAGATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAA
GCCACATGGCAAGGTGCCCGGCGACGACTGCCCGCTGGTGTGGGGCCAGTGCTCCCACTGCTTCCACATGCATTGCATCCTCAAGTGGCT
GCACGCACAGCAGGTGCAGCAGCACTGCCCCATGTGCCGCCAGGAATGGAAGTTCAAGGAGTGAGGCCCGACCTGGCTCTCGCTGGAGGG
GCATCCTGAGACTCCTTCCTCATGCTGGCGCCGATGGCTGCTGGGGACAGCGCCCCTGAGCTGCAACAAGGTGGAAACAAGGGCTGGAGC
TGCGTTTGTTTTGCCATCACTATGTTGACACTTTTATCCAATAAGTGAAAACTCATTAAACTACTCAAATCTTGCTGGAGGCCTCTGGGT
GCCTGTGTTCTCGGCATATAGATGTGGTCTCGGTGTGTTTTGATATGAAAACTCTCATGAATAAACATCTCCGTGAAACGCCAAGGCCCT
CGTCAAACCCTGAGTCATGACTGGGAGGAGAAGGAGCAGGATCAGACGGTAGAGCCTGGGGCATGCTCTTCAGGCATGCTCTTGCCTGCT


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FusionGenePPI for CCDC40_ANAPC11


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
CCDC40APP, TRAF5, ANKRD26, UNC13B, CENPH, HMMR, VPS53, TNIP2, COG4, FAM83D, STIM1, TMTC4, PSMC3, KIAA0319L, CYTH2, CYTH1, PCM1, POTEI, PSMD9, GTF2H2C, VAPB, VAPA, PACRG, IFT122, DCAF7, IFT43, TTC21BANAPC11CDC27, ANAPC10, ANAPC2, CDC20, CUL5, UBE2U, ANAPC4, FBXO5, UBE2C, UBE2D1, UBE2D2, UBE2S, FZR1, UBE2K, CCNB1, RNF111, TRIM65, MAK, ZAP70, CAPN11, NKD2, MLKL, CDC23, CDC16, BIRC6, CCNA2, UBC, ANAPC11, PTTG1, E2F1, UBE2L1, TRIM25, UBE2D3


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for CCDC40_ANAPC11


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CCDC40_ANAPC11


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneCCDC40C0022521Kartagener Syndrome1CTD_human;ORPHANET