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Fusion gene ID: 5767 |
FusionGeneSummary for CCDC113_CPNE2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: CCDC113_CPNE2 | Fusion gene ID: 5767 | Hgene | Tgene | Gene symbol | CCDC113 | CPNE2 | Gene ID | 29070 | 221184 |
| Gene name | coiled-coil domain containing 113 | copine 2 | |
| Synonyms | HSPC065 | COPN2|CPN2 | |
| Cytomap | 16q21 | 16q13 | |
| Type of gene | protein-coding | protein-coding | |
| Description | coiled-coil domain-containing protein 113 | copine-2copine II | |
| Modification date | 20180519 | 20180523 | |
| UniProtAcc | Q9H0I3 | Q96FN4 | |
| Ensembl transtripts involved in fusion gene | ENST00000219299, ENST00000443128, ENST00000566498, | ENST00000290776, ENST00000537605, ENST00000535318, ENST00000565874, ENST00000565951, | |
| Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 3 X 3 X 2=18 |
| # samples | 1 | 4 | |
| ** MAII score | log2(1/1*10)=3.32192809488736 | log2(4/18*10)=1.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: CCDC113 [Title/Abstract] AND CPNE2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | CESC | TCGA-EK-A2PM-01A | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000219299 | ENST00000290776 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000219299 | ENST00000537605 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000219299 | ENST00000535318 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000219299 | ENST00000565874 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| 5CDS-3UTR | ENST00000219299 | ENST00000565951 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000443128 | ENST00000290776 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000443128 | ENST00000537605 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000443128 | ENST00000535318 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| In-frame | ENST00000443128 | ENST00000565874 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| 5CDS-3UTR | ENST00000443128 | ENST00000565951 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| intron-3CDS | ENST00000566498 | ENST00000290776 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| intron-3CDS | ENST00000566498 | ENST00000537605 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| intron-3CDS | ENST00000566498 | ENST00000535318 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| intron-3CDS | ENST00000566498 | ENST00000565874 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
| intron-3UTR | ENST00000566498 | ENST00000565951 | CCDC113 | chr16 | 58301490 | + | CPNE2 | chr16 | 57179997 | + |
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FusionProtFeatures for CCDC113_CPNE2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| CCDC113 | CPNE2 |
| Component of centriolar satellites contributing toprimary cilium formation. {ECO:0000269|PubMed:25074808}. | Calcium-dependent phospholipid-binding protein thatplays a role in calcium-mediated intracellular processes. Exhibitscalcium-dependent cell membrane binding properties.{ECO:0000250|UniProtKB:P59108}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | CCDC113 | chr16:58301490 | chr16:57179997 | ENST00000219299 | + | 7 | 9 | 95_243 | 297 | 378 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | CCDC113 | chr16:58301490 | chr16:57179997 | ENST00000443128 | + | 6 | 8 | 95_243 | 243 | 324 | Coiled coil | Ontology_term=ECO:0000255 |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >CCDC113 | chr16:58301490 | chr16:57179997 | ENST00000219299 | + | 7 | 9 | 280_354 | 297 | 378 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >CCDC113 | chr16:58301490 | chr16:57179997 | ENST00000443128 | + | 6 | 8 | 280_354 | 243 | 324 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000290776 | + | 13 | 16 | 10_115 | 434 | 549 | Domain | C2 1 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000290776 | + | 13 | 16 | 141_246 | 434 | 549 | Domain | C2 2 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000290776 | + | 13 | 16 | 305_507 | 434 | 549 | Domain | VWFA |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000535318 | + | 14 | 17 | 10_115 | 434 | 549 | Domain | C2 1 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000535318 | + | 14 | 17 | 141_246 | 434 | 549 | Domain | C2 2 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000535318 | + | 14 | 17 | 305_507 | 434 | 549 | Domain | VWFA |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000565874 | + | 12 | 15 | 10_115 | 434 | 549 | Domain | C2 1 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000565874 | + | 12 | 15 | 141_246 | 434 | 549 | Domain | C2 2 |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000565874 | + | 12 | 15 | 305_507 | 434 | 549 | Domain | VWFA |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000290776 | + | 13 | 16 | 247_304 | 434 | 549 | Region | Linker region |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000535318 | + | 14 | 17 | 247_304 | 434 | 549 | Region | Linker region |
| Tgene | CPNE2 | chr16:58301490 | chr16:57179997 | ENST00000565874 | + | 12 | 15 | 247_304 | 434 | 549 | Region | Linker region |
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FusionGeneSequence for CCDC113_CPNE2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000290776_chr16_57179997_+_412aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000537605_chr16_57179997_+_412aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000535318_chr16_57179997_+_412aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000565874_chr16_57179997_+_412aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQFRGRRRSKSRTGMD RGVGLTADQKLELVQKEVADMKDDLRHTRANAERDLQHHEAIIEEAEIRWSEVSREVHEFEKDILKAISKKKGSILATQKVMKYIEDMNR RRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLETIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEI YLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQASKLPMSIIIVGVGNADFAAMEFLDGDSRMLRSHTGEE >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000290776_chr16_57179997_+_358aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000537605_chr16_57179997_+_358aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000535318_chr16_57179997_+_358aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000565874_chr16_57179997_+_358aa MTDDESESVLSDSHEGSELELPVIQLCGLVEELSYVNSALKTETEMFEKYYAKLEPRDQRPPRLSEIKISAADYAQAIIEEAEIRWSEVS REVHEFEKDILKAISKKKGSILATQKVMKYIEDMNRRRDNMKEKLRLKNVSLKVQRKKMLLQLRQKEEVSEALHDVDFQQLKIENAQFLE TIEARNQELTQLKLSSGNTLQVLNAYKSKLHKAMEIYLNLDKEILLRKELLEKIEKETLQVEEQYFILLIITDGVISDMEETRHAVVQAS |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000290776_chr16_57179997_+_1236nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGAC CGTGGGGTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCA AATGCGGAACGCGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTT GAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGC CGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAG GAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAAT CAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATA TACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTC ATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATC ATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAG GCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTG >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000537605_chr16_57179997_+_1236nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGAC CGTGGGGTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCA AATGCGGAACGCGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTT GAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGC CGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAG GAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAAT CAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATA TACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTC ATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATC ATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAG GCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTG >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000535318_chr16_57179997_+_1236nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGAC CGTGGGGTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCA AATGCGGAACGCGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTT GAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGC CGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAG GAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAAT CAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATA TACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTC ATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATC ATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAG GCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTG >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000565874_chr16_57179997_+_1236nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGAC CGTGGGGTAGGCCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCA AATGCGGAACGCGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTT GAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGC CGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAG GAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAAT CAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATA TACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTC ATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATC ATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAG GCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTG >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000290776_chr16_57179997_+_1074nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCG AGAGAAGTGCATGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATAC ATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTT TTACAATTGAGGCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAG ACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTT CACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAA GTAGAGGAGCAGTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCC AAGCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGC TCCCACACGGGGGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAA >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000537605_chr16_57179997_+_1074nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCG AGAGAAGTGCATGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATAC ATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTT TTACAATTGAGGCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAG ACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTT CACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAA GTAGAGGAGCAGTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCC AAGCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGC TCCCACACGGGGGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAA >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000535318_chr16_57179997_+_1074nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCG AGAGAAGTGCATGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATAC ATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTT TTACAATTGAGGCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAG ACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTT CACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAA GTAGAGGAGCAGTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCC AAGCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGC TCCCACACGGGGGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAA >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000565874_chr16_57179997_+_1074nt ATGACTGATGATGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTG GAGGAGCTCAGCTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGA CCTCCACGATTATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCG AGAGAAGTGCATGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATAC ATTGAGGACATGAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTT TTACAATTGAGGCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAG ACAATTGAAGCAAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTT CACAAGGCAATGGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAA GTAGAGGAGCAGTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCC AAGCTGCCCATGTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGC TCCCACACGGGGGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000290776_chr16_57179997_+_1623nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG GACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGCCAAACTGGCTTCCTCTCC TCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGAATAAAATTTTTACAATCA >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000537605_chr16_57179997_+_1621nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG GACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGCCAAACTGGCTTCCTCTCC TCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGAATAAAATTTTTACAATCA >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000535318_chr16_57179997_+_1623nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG GACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGCCAAACTGGCTTCCTCTCC TCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGAATAAAATTTTTACAATCA >In-frame_CCDC113_ENST00000219299_chr16_58301490_+_CPNE2_ENST00000565874_chr16_57179997_+_1452nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGTTTCGAGGCAGGCGTAGATCCAAATCCCGGACAGGTATGGACCGTGGGGTAGG CCTGACTGCCGACCAAAAACTTGAGCTGGTACAAAAAGAGGTTGCGGACATGAAGGATGACTTACGACACACAAGGGCAAATGCGGAACG CGACCTGCAGCATCACGAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCATGAGTTTGAAAAAGATAT TCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACATGAACCGCCGGAGGGATAA TATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAGGCAGAAGGAAGAGGTGAG TGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGCAAGGAATCAAGAACTGAC CCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAATGGAAATATACCTCAATCT GGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCAGTACTTCATCCTCCTCAT CATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCATGTCCATCATCATCGTGGG CGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGGGGAGGAGGCAGCCCGCGA TATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGCGGAGCTGCCCCAACAAGT TGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAGCAGCATGTCAGCTGAGCC TCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTTTTTTATTTTTTACAACCG >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000290776_chr16_57179997_+_1461nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT TTTTATTTTTTACAACCGGACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGC CAAACTGGCTTCCTCTCCTCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGA >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000537605_chr16_57179997_+_1459nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT TTTTATTTTTTACAACCGGACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGC CAAACTGGCTTCCTCTCCTCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGA >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000535318_chr16_57179997_+_1461nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT TTTTATTTTTTACAACCGGACCTCCACCCCCAACTTCCTCCAGCCCAGCTGGGCTTCCTTTGTTGGAGTCAACTGTTGATGCTTCCAGGC CAAACTGGCTTCCTCTCCTCCTCTCCCCACCTTTGCCATTCTTAAGTATTGAATGTACTTTGTATAATTTTAGTGGAATTGTTATTGAGA >In-frame_CCDC113_ENST00000443128_chr16_58301490_+_CPNE2_ENST00000565874_chr16_57179997_+_1290nt GCAGCCGGAGTGACGCGTGGCCGCCGGCACCCGGAGCTCCTGGGCACACGGCATTGGCAGGGGCCGCTTCGGCAGAGTGATGACTGATGA TGAGTCCGAGAGCGTCCTCTCCGACTCCCATGAAGGGTCGGAGCTGGAGCTGCCTGTTATCCAGCTGTGCGGGCTGGTGGAGGAGCTCAG CTATGTAAACTCTGCTCTCAAAACTGAGACTGAGATGTTTGAGAAATATTACGCTAAACTGGAGCCCAGGGATCAGCGACCTCCACGATT ATCAGAAATTAAAATATCAGCAGCAGATTATGCACAGGCGATCATTGAGGAGGCTGAAATTCGATGGAGTGAAGTTTCGAGAGAAGTGCA TGAGTTTGAAAAAGATATTCTAAAAGCCATATCCAAGAAGAAAGGGAGTATTTTGGCCACTCAGAAAGTGATGAAATACATTGAGGACAT GAACCGCCGGAGGGATAATATGAAGGAGAAATTACGTTTGAAAAATGTTTCTCTCAAAGTTCAGAGGAAAAAAATGCTTTTACAATTGAG GCAGAAGGAAGAGGTGAGTGAGGCCCTTCACGATGTTGATTTTCAGCAGTTGAAGATAGAGAACGCTCAATTTCTTGAGACAATTGAAGC AAGGAATCAAGAACTGACCCAGCTAAAGCTGTCATCTGGAAACACTCTGCAGGTTCTCAATGCCTACAAAAGCAAGCTTCACAAGGCAAT GGAAATATACCTCAATCTGGACAAGGAGATCTTGCTGAGAAAAGAGCTACTTGAAAAAATTGAAAAAGAAACACTACAAGTAGAGGAGCA GTACTTCATCCTCCTCATCATCACGGACGGGGTCATCAGTGACATGGAGGAGACACGGCATGCCGTGGTGCAGGCTTCCAAGCTGCCCAT GTCCATCATCATCGTGGGCGTGGGCAATGCGGACTTCGCTGCCATGGAGTTCCTGGATGGGGACAGCCGCATGCTGCGCTCCCACACGGG GGAGGAGGCAGCCCGCGATATTGTGCAGTTCGTTCCCTTTCGAGAGTTCCGCAACGCAGCAAAAGAGACCTTGGCCAAAGCTGTGCTGGC GGAGCTGCCCCAACAAGTTGTGCAGTATTTCAAGCATAAAAACCTGCCCCCCACCAACTCGGAGCCCGCCTGAGCTCCAGTGCCCAGCAG CAGCATGTCAGCTGAGCCTCCTGCCCTCCCCCAGGAACATGCACGCTCACTCTGCTTCCTTGTGGGTGGCCTTTTTTTACCGATCCCCTT |
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FusionGenePPI for CCDC113_CPNE2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| CCDC113 | GIT1, HAP1, IMMT, PFN2, SMYD1, LTBR | CPNE2 | IKBKG, CDKN1A, ANXA7, TERF2IP, COPS5, S100A16, BAG3, REL, TRIM27, UBA3, SORBS3, LNX1, TMEM185A, SEC23B, MCM2, HIP1, RABEP2, USP24, MLLT4, DNM1L, RABGEF1, NEK1, PIBF1, TXLNG, EBF3, TXLNA, OSBPL3, ZDBF2, DDI2, POLR2M, NUPL1, RPAP2, NEK3, INTS3, NUP54, POLR2J, POLR2D, POLR2A, EIF3H, SUPT5H, HDGF, EIF3A, NOC2L, ZNF318, RNF138, POLR2I, NUP62, POLR2B, UBE2A |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for CCDC113_CPNE2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CCDC113_CPNE2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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