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Fusion gene ID: 4676 |
FusionGeneSummary for C12orf52_GRHL2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: C12orf52_GRHL2 | Fusion gene ID: 4676 | Hgene | Tgene | Gene symbol | C12orf52 | GRHL2 | Gene ID | 84934 | 79977 |
Gene name | RBPJ interacting and tubulin associated 1 | grainyhead like transcription factor 2 | |
Synonyms | C12orf52|RITA | BOM|DFNA28|ECTDS|TFCP2L3 | |
Cytomap | 12q24.13 | 8q22.3 | |
Type of gene | protein-coding | protein-coding | |
Description | RBPJ-interacting and tubulin-associated protein 1 | grainyhead-like protein 2 homologbrother of mammalian grainyheadgrainyhead-like 2transcription factor CP2-like 3 | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q6ISB3 | ||
Ensembl transtripts involved in fusion gene | ENST00000549621, ENST00000548278, ENST00000552495, | ENST00000251808, ENST00000395927, ENST00000517674, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 3 X 3 X 3=27 |
# samples | 1 | 3 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(3/27*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: C12orf52 [Title/Abstract] AND GRHL2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | C12orf52 | GO:0045746 | negative regulation of Notch signaling pathway | 21102556 |
Hgene | C12orf52 | GO:0051168 | nuclear export | 21102556 |
Tgene | GRHL2 | GO:0008544 | epidermis development | 23254293 |
Tgene | GRHL2 | GO:0044030 | regulation of DNA methylation | 23254293 |
Tgene | GRHL2 | GO:0045617 | negative regulation of keratinocyte differentiation | 23254293 |
Tgene | GRHL2 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 23814079 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | HNSC | TCGA-CV-7253-01A | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000549621 | ENST00000251808 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
5CDS-5UTR | ENST00000549621 | ENST00000395927 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
5CDS-intron | ENST00000549621 | ENST00000517674 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
In-frame | ENST00000548278 | ENST00000251808 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
5CDS-5UTR | ENST00000548278 | ENST00000395927 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
5CDS-intron | ENST00000548278 | ENST00000517674 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
In-frame | ENST00000552495 | ENST00000251808 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
5CDS-5UTR | ENST00000552495 | ENST00000395927 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
5CDS-intron | ENST00000552495 | ENST00000517674 | C12orf52 | chr12 | 113624853 | + | GRHL2 | chr8 | 102555469 | + |
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FusionProtFeatures for C12orf52_GRHL2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
C12orf52 | GRHL2 |
Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. | Transcription factor playing an important role inprimary neurulation and in epithelial development(PubMed:29309642, PubMed:25152456). Binds directly to theconsensus DNA sequence 5'-AACCGGTT-3' acting as an activator andrepressor on distinct target genes (By similarity). Duringembryogenesis, plays unique and cooperative roles with GRHL3 inestablishing distinct zones of primary neurulation. Essential forclosure 3 (rostral end of the forebrain), functions cooperativelywith GRHL3 in closure 2 (forebrain/midbrain boundary) andposterior neuropore closure (By similarity). Regulates epithelialmorphogenesis acting as a target gene-associated transcriptionalactivator of apical junctional complex components. Up-regulates ofCLDN3 and CLDN4, as well as of RAB25, which increases the CLDN4protein and its localization at tight junctions (By similarity).Comprises an essential component of the transcriptional machinerythat establishes appropriate expression levels of CLDN4 and CDH1in different types of epithelia. Exhibits functional redundancywith GRHL3 in epidermal morphogenetic events and epidermal woundrepair (By similarity). In lung, forms a regulatory loop withNKX2-1 that coordinates lung epithelial cell morphogenesis anddifferentiation (By similarity). In keratinocytes, plays a role intelomerase activation during cellular proliferation, regulatesTERT expression by binding to TERT promoter region and inhibitingDNA methylation at the 5'-CpG island, possibly by interfering withDNMT1 enzyme activity (PubMed:19015635, PubMed:20938050). Inaddition, impairs keratinocyte differentiation and epidermalfunction by inhibiting the expression of genes clustered at theepidermal differentiation complex (EDC) as well as GRHL1 and GRHL3through epigenetic mechanisms (PubMed:23254293).{ECO:0000250|UniProtKB:Q8K5C0, ECO:0000269|PubMed:19015635,ECO:0000269|PubMed:20938050, ECO:0000269|PubMed:20978075,ECO:0000269|PubMed:23254293, ECO:0000269|PubMed:25152456,ECO:0000269|PubMed:29309642, ECO:0000305|PubMed:12175488}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >GRHL2 | chr12:113624853 | chr8:102555469 | ENST00000395927 | + | 0 | 16 | 1_93 | -10 | 610 | Region | Transcription activation |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | GRHL2 | chr12:113624853 | chr8:102555469 | ENST00000251808 | + | 0 | 16 | 1_93 | 6 | 626 | Region | Transcription activation |
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FusionGeneSequence for C12orf52_GRHL2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_C12orf52_ENST00000549621_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_720aa MKTPVELAVSGMQTLGLQHRCRGGYRVKARTSYVDETLFGSPAGTRPTPPDFDPPWVEKANRTRGVGKEASKALGAKGSCETTPSRGSTP TLTPRKKNKYSNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVPRDKRLLSVSKAS DSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTVPVNLSLNQDHLENSKREQYSISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPR GDGEEQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMYDQTSSGTFQYTLEATKSLRQKQGEGP MTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVS FTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQTQC NSSSDGKLAAIPLQKKSDITYFKTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTK RVLLYVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNEDTFILNMESMVEGFKVTLMEIX >In-frame_C12orf52_ENST00000548278_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_720aa MKTPVELAVSGMQTLGLQHRCRGGYRVKARTSYVDETLFGSPAGTRPTPPDFDPPWVEKANRTRGVGKEASKALGAKGSCETTPSRGSTP TLTPRKKNKYSNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAAALGLLYDYYKVPRDKRLLSVSKAS DSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTVPVNLSLNQDHLENSKREQYSISFPESSAIIPVSGITVVKAEDFTPVFMAPPVHYPR GDGEEQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMYDQTSSGTFQYTLEATKSLRQKQGEGP MTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVLDIADYKESFNTIGNIEEIAYNAVS FTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAERKIRDEERKQNRKKGKGQASQTQC NSSSDGKLAAIPLQKKSDITYFKTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTDDEREGGSVLVKRMFRPMEEEFGPVPSKQMKEEGTK RVLLYVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYSNEDTFILNMESMVEGFKVTLMEIX >In-frame_C12orf52_ENST00000552495_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_744aa MLREPRKQGLAGRAHLLSPGTTGSMKTPVELAVSGMQTLGLQHRCRGGYRVKARTSYVDETLFGSPAGTRPTPPDFDPPWVEKANRTRGV GKEASKALGAKGSCETTPSRGSTPTLTPRKKNKYSNKRLVALVPMPSDPPFNTRRAYTSEDEAWKSYLENPLTAATKAMMSINGDEDSAA ALGLLYDYYKVPRDKRLLSVSKASDSQEDQEKRNCLGTSEAQSNLSGGENRVQVLKTVPVNLSLNQDHLENSKREQYSISFPESSAIIPV SGITVVKAEDFTPVFMAPPVHYPRGDGEEQRVVIFEQTQYDVPSLATHSAYLKDDQRSTPDSTYSESFKDAATEKFRSASVGAEEYMYDQ TSSGTFQYTLEATKSLRQKQGEGPMTYLNKGQFYAITLSETGDNKCFRHPISKVRSVVMVVFSEDKNRDEQLKYWKYWHSRQHTAKQRVL DIADYKESFNTIGNIEEIAYNAVSFTWDVNEEAKIFITVNCLSTDFSSQKGVKGLPLMIQIDTYSYNNRSNKPIHRAYCQIKVFCDKGAE RKIRDEERKQNRKKGKGQASQTQCNSSSDGKLAAIPLQKKSDITYFKTMPDLHSQPVLFIPDVHFANLQRTGQVYYNTDDEREGGSVLVK RMFRPMEEEFGPVPSKQMKEEGTKRVLLYVRKETDDVFDALMLKSPTVKGLMEAISEKYGLPVEKIAKLYKKSKKGILVNMDDNIIEHYS |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_C12orf52_ENST00000549621_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_2160nt ATGAAGACCCCCGTGGAGCTGGCCGTCAGTGGGATGCAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGCCAGG ACGTCATATGTGGATGAGACTCTGTTTGGCAGCCCAGCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAAGGCT AACAGAACCAGAGGCGTGGGCAAGGAGGCATCGAAGGCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCACCCCC ACCCTCACACCAAGGAAGAAGAACAAATACAGTAATAAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATACCCGA AGAGCCTACACCAGTGAGGATGAAGCCTGGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGT GATGAGGACAGTGCTGCTGCCCTCGGCCTGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGT GACAGCCAAGAAGACCAGGAGAAAAGAAACTGCCTTGGCACCAGTGAAGCCCAGAGTAATTTGAGTGGAGGAGAAAACCGAGTGCAAGTC CTAAAGACTGTTCCAGTGAACCTTTCCCTAAATCAAGATCACCTGGAGAATTCCAAGCGGGAACAGTACAGCATCAGCTTCCCCGAGAGC TCTGCCATCATCCCGGTGTCGGGAATCACGGTGGTGAAAGCTGAAGATTTCACACCAGTTTTCATGGCCCCACCTGTGCACTATCCCCGG GGAGATGGGGAAGAGCAACGAGTGGTTATCTTTGAACAGACTCAGTATGACGTGCCCTCGCTGGCCACCCACAGCGCCTATCTCAAAGAC GACCAGCGCAGCACTCCGGACAGCACATACAGCGAGAGCTTCAAGGACGCAGCCACAGAGAAATTTCGGAGTGCTTCAGTTGGGGCTGAG GAGTACATGTATGATCAGACATCAAGTGGCACATTTCAGTACACCCTGGAAGCCACCAAATCTCTCCGTCAGAAGCAGGGGGAGGGCCCC ATGACCTACCTCAACAAAGGACAGTTCTATGCCATAACACTCAGCGAGACCGGAGACAACAAATGCTTCCGACACCCCATCAGCAAAGTC AGGAGTGTGGTGATGGTGGTCTTCAGTGAAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACG GCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCC TTTACCTGGGACGTGAATGAAGAGGCGAAGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGA CTTCCTTTGATGATTCAGATTGACACATACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTC TGTGACAAAGGAGCAGAAAGAAAAATCCGAGATGAAGAGCGGAAGCAGAACAGGAAGAAAGGGAAAGGCCAGGCCTCCCAAACTCAATGC AACAGCTCCTCTGATGGGAAGTTGGCTGCCATACCTTTACAGAAGAAGAGTGACATCACCTACTTCAAAACCATGCCTGATCTCCACTCA CAGCCAGTTCTCTTCATACCTGATGTTCACTTTGCAAACCTGCAGAGGACCGGACAGGTGTATTACAACACGGATGATGAACGAGAAGGT GGCAGTGTCCTTGTTAAACGGATGTTCCGGCCCATGGAAGAGGAGTTTGGTCCAGTGCCTTCAAAGCAGATGAAAGAAGAAGGGACAAAG CGAGTGCTCTTGTACGTGAGGAAGGAGACTGACGATGTGTTCGATGCATTGATGTTGAAGTCTCCCACAGTGAAGGGCCTGATGGAAGCG ATATCTGAGAAATATGGGCTGCCCGTGGAGAAGATAGCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCTTGGTGAACATGGATGACAAC ATCATCGAGCACTACTCGAACGAGGACACCTTCATCCTCAACATGGAGAGCATGGTGGAGGGCTTCAAGGTCACGCTCATGGAAATCTAG >In-frame_C12orf52_ENST00000548278_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_2160nt ATGAAGACCCCCGTGGAGCTGGCCGTCAGTGGGATGCAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGCCAGG ACGTCATATGTGGATGAGACTCTGTTTGGCAGCCCAGCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAAGGCT AACAGAACCAGAGGCGTGGGCAAGGAGGCATCGAAGGCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCACCCCC ACCCTCACACCAAGGAAGAAGAACAAATACAGTAATAAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATACCCGA AGAGCCTACACCAGTGAGGATGAAGCCTGGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGT GATGAGGACAGTGCTGCTGCCCTCGGCCTGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGT GACAGCCAAGAAGACCAGGAGAAAAGAAACTGCCTTGGCACCAGTGAAGCCCAGAGTAATTTGAGTGGAGGAGAAAACCGAGTGCAAGTC CTAAAGACTGTTCCAGTGAACCTTTCCCTAAATCAAGATCACCTGGAGAATTCCAAGCGGGAACAGTACAGCATCAGCTTCCCCGAGAGC TCTGCCATCATCCCGGTGTCGGGAATCACGGTGGTGAAAGCTGAAGATTTCACACCAGTTTTCATGGCCCCACCTGTGCACTATCCCCGG GGAGATGGGGAAGAGCAACGAGTGGTTATCTTTGAACAGACTCAGTATGACGTGCCCTCGCTGGCCACCCACAGCGCCTATCTCAAAGAC GACCAGCGCAGCACTCCGGACAGCACATACAGCGAGAGCTTCAAGGACGCAGCCACAGAGAAATTTCGGAGTGCTTCAGTTGGGGCTGAG GAGTACATGTATGATCAGACATCAAGTGGCACATTTCAGTACACCCTGGAAGCCACCAAATCTCTCCGTCAGAAGCAGGGGGAGGGCCCC ATGACCTACCTCAACAAAGGACAGTTCTATGCCATAACACTCAGCGAGACCGGAGACAACAAATGCTTCCGACACCCCATCAGCAAAGTC AGGAGTGTGGTGATGGTGGTCTTCAGTGAAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACG GCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCC TTTACCTGGGACGTGAATGAAGAGGCGAAGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGA CTTCCTTTGATGATTCAGATTGACACATACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTC TGTGACAAAGGAGCAGAAAGAAAAATCCGAGATGAAGAGCGGAAGCAGAACAGGAAGAAAGGGAAAGGCCAGGCCTCCCAAACTCAATGC AACAGCTCCTCTGATGGGAAGTTGGCTGCCATACCTTTACAGAAGAAGAGTGACATCACCTACTTCAAAACCATGCCTGATCTCCACTCA CAGCCAGTTCTCTTCATACCTGATGTTCACTTTGCAAACCTGCAGAGGACCGGACAGGTGTATTACAACACGGATGATGAACGAGAAGGT GGCAGTGTCCTTGTTAAACGGATGTTCCGGCCCATGGAAGAGGAGTTTGGTCCAGTGCCTTCAAAGCAGATGAAAGAAGAAGGGACAAAG CGAGTGCTCTTGTACGTGAGGAAGGAGACTGACGATGTGTTCGATGCATTGATGTTGAAGTCTCCCACAGTGAAGGGCCTGATGGAAGCG ATATCTGAGAAATATGGGCTGCCCGTGGAGAAGATAGCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCTTGGTGAACATGGATGACAAC ATCATCGAGCACTACTCGAACGAGGACACCTTCATCCTCAACATGGAGAGCATGGTGGAGGGCTTCAAGGTCACGCTCATGGAAATCTAG >In-frame_C12orf52_ENST00000552495_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_2232nt ATGCTCAGGGAGCCTCGGAAGCAGGGCCTGGCCGGCAGAGCACACCTGCTGTCACCAGGGACCACAGGCAGCATGAAGACCCCCGTGGAG CTGGCCGTCAGTGGGATGCAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGCCAGGACGTCATATGTGGATGAG ACTCTGTTTGGCAGCCCAGCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAAGGCTAACAGAACCAGAGGCGTG GGCAAGGAGGCATCGAAGGCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCACCCCCACCCTCACACCAAGGAAG AAGAACAAATACAGTAATAAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATACCCGAAGAGCCTACACCAGTGAG GATGAAGCCTGGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGTGATGAGGACAGTGCTGCT GCCCTCGGCCTGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGTGACAGCCAAGAAGACCAG GAGAAAAGAAACTGCCTTGGCACCAGTGAAGCCCAGAGTAATTTGAGTGGAGGAGAAAACCGAGTGCAAGTCCTAAAGACTGTTCCAGTG AACCTTTCCCTAAATCAAGATCACCTGGAGAATTCCAAGCGGGAACAGTACAGCATCAGCTTCCCCGAGAGCTCTGCCATCATCCCGGTG TCGGGAATCACGGTGGTGAAAGCTGAAGATTTCACACCAGTTTTCATGGCCCCACCTGTGCACTATCCCCGGGGAGATGGGGAAGAGCAA CGAGTGGTTATCTTTGAACAGACTCAGTATGACGTGCCCTCGCTGGCCACCCACAGCGCCTATCTCAAAGACGACCAGCGCAGCACTCCG GACAGCACATACAGCGAGAGCTTCAAGGACGCAGCCACAGAGAAATTTCGGAGTGCTTCAGTTGGGGCTGAGGAGTACATGTATGATCAG ACATCAAGTGGCACATTTCAGTACACCCTGGAAGCCACCAAATCTCTCCGTCAGAAGCAGGGGGAGGGCCCCATGACCTACCTCAACAAA GGACAGTTCTATGCCATAACACTCAGCGAGACCGGAGACAACAAATGCTTCCGACACCCCATCAGCAAAGTCAGGAGTGTGGTGATGGTG GTCTTCAGTGAAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACGGCGAAGCAGAGGGTCCTT GACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCCTTTACCTGGGACGTGAAT GAAGAGGCGAAGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGACTTCCTTTGATGATTCAG ATTGACACATACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTCTGTGACAAAGGAGCAGAA AGAAAAATCCGAGATGAAGAGCGGAAGCAGAACAGGAAGAAAGGGAAAGGCCAGGCCTCCCAAACTCAATGCAACAGCTCCTCTGATGGG AAGTTGGCTGCCATACCTTTACAGAAGAAGAGTGACATCACCTACTTCAAAACCATGCCTGATCTCCACTCACAGCCAGTTCTCTTCATA CCTGATGTTCACTTTGCAAACCTGCAGAGGACCGGACAGGTGTATTACAACACGGATGATGAACGAGAAGGTGGCAGTGTCCTTGTTAAA CGGATGTTCCGGCCCATGGAAGAGGAGTTTGGTCCAGTGCCTTCAAAGCAGATGAAAGAAGAAGGGACAAAGCGAGTGCTCTTGTACGTG AGGAAGGAGACTGACGATGTGTTCGATGCATTGATGTTGAAGTCTCCCACAGTGAAGGGCCTGATGGAAGCGATATCTGAGAAATATGGG CTGCCCGTGGAGAAGATAGCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCTTGGTGAACATGGATGACAACATCATCGAGCACTACTCG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_C12orf52_ENST00000549621_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_5867nt GCGGTGACCACGTGACCTCCGCTGAGCTTTCGCCAGTGCCTGCGGCCCTCGGCGGCCTAGTACACACGCACCTGAGTGAGTGGCACCAGA GGACCCTCTCCATGTTTAGGGACCTCCTGGGCCTCAGGAGCGTGGCGCCCGCCCCTGGGCGGACTCCCCCCATCCGCGGGCGCGAATGGT CCGGGCCGCGTCCGCAGTGCTGCTGGCTGCTCCCTGGTTGCTGGGTGCAAAGTGCTGGGTTCTGGGTTTCTGGATTCGCGGGCCGTTCAC ACGTAGCCTGTGCCGGCTCCTCGGGTGAGTCCGTCCGCGCGCGGTGCCCCGGGACGGCCTAGGCTGCCGGGGGTCCGGGGCCCCAGGCAT TCCGGGCTGCAGATTGACGGGGATCCCGGATGCACCGCGCGCCCCCGCGCCCTCACCGACGGGTCCAGACCTGGTGGGAAGAAGGTGCGG GGACGGGTCCCTGAGGATCCCGATGCCTACGAGCCAAGATGCTCAGGTGTGACCTACACATGTGACTTCACCTCAGTTTTGTGATCCGTA AAATGGACAAATTCGAAGCTACTTCACAGTGCTGTTGAGAGGATTAAATGAAACAATGCTTGTAAAGCTCTTTGCAGGAGGGAGCCTCGG AAGCAGGGCCTGGCCGGCAGAGCACACCTGCTGTCACCAGGGACCACAGGCAGCATGAAGACCCCCGTGGAGCTGGCCGTCAGTGGGATG CAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGCCAGGACGTCATATGTGGATGAGACTCTGTTTGGCAGCCCA GCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAAGGCTAACAGAACCAGAGGCGTGGGCAAGGAGGCATCGAAG GCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCACCCCCACCCTCACACCAAGGAAGAAGAACAAATACAGTAAT AAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATACCCGAAGAGCCTACACCAGTGAGGATGAAGCCTGGAAGTCA TACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGTGATGAGGACAGTGCTGCTGCCCTCGGCCTGCTCTAT GACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGTGACAGCCAAGAAGACCAGGAGAAAAGAAACTGCCTT GGCACCAGTGAAGCCCAGAGTAATTTGAGTGGAGGAGAAAACCGAGTGCAAGTCCTAAAGACTGTTCCAGTGAACCTTTCCCTAAATCAA GATCACCTGGAGAATTCCAAGCGGGAACAGTACAGCATCAGCTTCCCCGAGAGCTCTGCCATCATCCCGGTGTCGGGAATCACGGTGGTG AAAGCTGAAGATTTCACACCAGTTTTCATGGCCCCACCTGTGCACTATCCCCGGGGAGATGGGGAAGAGCAACGAGTGGTTATCTTTGAA CAGACTCAGTATGACGTGCCCTCGCTGGCCACCCACAGCGCCTATCTCAAAGACGACCAGCGCAGCACTCCGGACAGCACATACAGCGAG AGCTTCAAGGACGCAGCCACAGAGAAATTTCGGAGTGCTTCAGTTGGGGCTGAGGAGTACATGTATGATCAGACATCAAGTGGCACATTT CAGTACACCCTGGAAGCCACCAAATCTCTCCGTCAGAAGCAGGGGGAGGGCCCCATGACCTACCTCAACAAAGGACAGTTCTATGCCATA ACACTCAGCGAGACCGGAGACAACAAATGCTTCCGACACCCCATCAGCAAAGTCAGGAGTGTGGTGATGGTGGTCTTCAGTGAAGACAAA AACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACGGCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAG GAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCCTTTACCTGGGACGTGAATGAAGAGGCGAAGATTTTC ATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGACTTCCTTTGATGATTCAGATTGACACATACAGTTAT AACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTCTGTGACAAAGGAGCAGAAAGAAAAATCCGAGATGAA GAGCGGAAGCAGAACAGGAAGAAAGGGAAAGGCCAGGCCTCCCAAACTCAATGCAACAGCTCCTCTGATGGGAAGTTGGCTGCCATACCT TTACAGAAGAAGAGTGACATCACCTACTTCAAAACCATGCCTGATCTCCACTCACAGCCAGTTCTCTTCATACCTGATGTTCACTTTGCA AACCTGCAGAGGACCGGACAGGTGTATTACAACACGGATGATGAACGAGAAGGTGGCAGTGTCCTTGTTAAACGGATGTTCCGGCCCATG GAAGAGGAGTTTGGTCCAGTGCCTTCAAAGCAGATGAAAGAAGAAGGGACAAAGCGAGTGCTCTTGTACGTGAGGAAGGAGACTGACGAT GTGTTCGATGCATTGATGTTGAAGTCTCCCACAGTGAAGGGCCTGATGGAAGCGATATCTGAGAAATATGGGCTGCCCGTGGAGAAGATA GCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCTTGGTGAACATGGATGACAACATCATCGAGCACTACTCGAACGAGGACACCTTCATC CTCAACATGGAGAGCATGGTGGAGGGCTTCAAGGTCACGCTCATGGAAATCTAGCCCTGGGTTTGGCATCCGCTTTGGCTGGAGCTCTCA GTGCGTTCCTCCCTGAGAGAGACAGAAGCCCCAGCCCCAGAACCTGGAGACCCATCTCCCCCATCTCACAACTGCTGTTACAAGACCGTG CTGGGGAGTGGGGCAAGGGACAGGCCCCACTGTCGGTGTGCTTGGCCCATCCACTGGCACCTACCACGGAGCTGAAGCCTGAGCCCCTCA GGAAGGTGCCTTAGGCCTGTTGGATTCCTATTTATTGCCCACCTTTTCCTGGAGCCCAGGTCCAGGCCCGCCAGGACTCTGCAGGTCACT GCTAGCTCCAGATGAGACCGTCCAGCGTTCCCCCTTCAAGAGAAACACTCATCCCGAACAGCCTAAAAAATTCCCATCCCTTCTCTCTCA CCCCTCCATATCTATCTCCCGAGTGGCTGGACAAAATGAGCTACGTCTGGGTGCAGTAGTTATAGGTGGGGCAAGAGGTGGATGCCCACT TTCTGGTCAGACACCTTTAGGTTGCTCTGGGGAAGGCTGTCTTGCTAAATACCTCCAGGGTTCCCAGCAAGTGGCCACCAGGCCTTGTAC AGGAAGACATTCAGTCACCGTGTAATTAGTAACACAGAAAGTCTGCCTGTCTGCATTGTACATAGTGTTTATAATATTGTAATAATATAT TTTACCTGTGGTATGTGGGCATGTTTACTGCCACTGGCCTAGAGGAGACACAGACCTGGAGACCGTTTTAATGGGGGTTTTTGCCTCTGT GCCTGTTCAAGAGACTTGCAGGGCTAGGTAGAGGGCCTTTGGGATGTTAAGGTGACTGCAGCTGATGCCAAGATGGACTCTGCAATGGGC ATACCTGGGGGCTCGTTCCCTGTCCCCAGAGGAAGCCCCCTCTCCTTCTCCATGGGCATGACTCTCCTTCGAGGCCACCACGTTTATCTC ACAATGATGTGTTTTGCTTGACTTTCCCTTTGCGCTGTCTCGTGGGAAAGGTCATTCTGTCTGAGACCCCAGCTCCTTCTCCAGCTTTGG CTGCGGGCATGGCCTGAGCTTTCTGGAGAGCCTCTGCAGGGGGTTTGCCATCAGGGCCCTGTGGCTGGGTCTGCTGCAGAGCTCCTTGGC TATCAGGAGAATCCTGGACACTGTACTGTGCCTCCCAGTTTACAAACACGCCCTTCATCTCAAGTGGCCCTTTAAAAGGCCTGCTGCCAT GTGAGAGCTGTGAACAGCTCAGCTCTGAGTCGGCAGGCTGGGGCTTCCTCCTGGGCCACCAGATGGAAAGGGGGTATTGTTTGCCTCACT CCTGGATGCTGCGTTTTAAGGAAGTGAGTGAGAAAGAATGTGCCAAGATACCTGGCTCCTGTGAAACCAGCCTCAGGAGGGAAACTGGGA GAGAGAAGCTGTGGTCTCCTGCTACATGCCCTGGGAGCTGGAAGAGAAAAACACTCCCCTAAACAATCGCAAAATGATGAACCATCATGG GCCACTGTTCTCTTTGAGGGGACAGGTTTAGGGGTTTGCGTTCGCCCTTGTGGGCTGAAGCACTAGCTTTTTGGTAGCTAGACACATCCT GCACCCAAAGGTTCTCTACAAAGGCCCAGATTTGTTTGTAAAGCACTTTGACTCTTACCTGGAGGCCCGCTCTCTAAGGGCTTCCTGCGC TCCCACCTCATCTGTCCCTGAGATGCAGAGCAGGATGGAGGGTCTGCTTCTAGCTCAGCTGTTTCTCCTTGAGGTTGCGGAGGAATTGAA TTGAATGGGACAGAGGGCAGGTGCTGTGGCCAAGAAGATCTCCGAGCAGCAGTGACGGGGCACCTTGCTGTGTGTCCTCTGGGCATGTTA ACCCTTCTGTGGGGCCAAAGGTTTGCATCGTGGATCCAGCTGTGCTCCAGTCTGTCCCCTCCTCCTCCACTCTGACTGCCACGCCCCGGA CCAGCAGCTTGGGGACCCTCCAGGGTACTAATGGGGCTCTGTTCTGAGATGGACAAATTCAGTGTTGGAAATACATGTTGTACTATGCAC TTCCCATGCTCCTAGGGTTAGGAATAGTTTCAAACATGATTGGCAGACATAACAACGGCAAATACTCGGACTGGGGCATAGGACTCCAGA GTAGGAAAAAGACAAAAGATTTGGCAGCCTGACACAGGCAACCTACCCCTCTCTCTCCAGCCTCTTTATGAAACTGTTTGTTTGCCAGTC CTGCCCTAAGGCAGAAGATGAATTGAAGATGCTGTGCATGTTTCCTAAGTCCTTGAGCAATCATGGTGGTGACAATTGCCACAAGGGATA TGAGGCCAGTGCCACCAGAGGGTGGTGCCAAGTGCCACATCCCTTCCGATCCATTCCCCTCTGCATCCTCGGAGCACCCCAGTTTGCCTT TGATGTGTCCGCTGTGTATGTTAGCTGAACTTTGATGAGCAAAATTTCCTGAGCGAAACACTCCAAAGAGATAGGAAAACTTGCCGCCTC TTCTTTTTTGTCCCTTAATCAAACTCAAATAAGCTTAAAAAAAATCCATGGAAGATCATGGACATGTGAAATGAGCATTTTTTTCTTTTT TTTTTTTAACAAAGTCTGAACTGAACAGAACAAGACTTTTTCCTCATACATCTCCAAATTGTTTAAACTTACTTTATGAGTGTTTGTTTA GAAGTTCGGACCAACAGAAAAATGCAGTCAGATGTCATCTTGGAATTGGTTTCTAAAAGAGTAAGGCATGTCCCTGCCCAGAAACTTAGG AAGCATGAAATAAATCAAATGTTTATTTTCCTTCTTATTTAAAATCATGCAAATGCAACAGAAATAGAGGGTTTGTGCCAAATGCTATGA ACGGCCCTTTCTTAAAGACAAGCAAGGGAGATTGATATATGTACAATTTGCTCTCATGTTTTAAAAAAAAAAAGGTAAATGTAACTTAAT AGTTTTGTAAATGGGAGAGGGGGAATCTATAAACTATAAATACAGTTATTTTATTTTTTGTACATTTTTAAGGAGAAAAAATAAATATTC >In-frame_C12orf52_ENST00000548278_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_5875nt GCGGTGACCACGTGACCTCCGCTGAGCTTTCGCCAGTGCCTGCGGCCCTCGGCGGCCTAGTACACACGCACCTGAGTGAGTGGCACCAGA GGACCCTCTCCATGTTTAGGGACCTCCTGGGCCTCAGGAGCGTGGCGCCCGCCCCTGGGCGGACTCCCCCCATCCGCGGGCGCGAATGGT CCGGGCCGCGTCCGCAGTGCTGCTGGCTGCTCCCTGGTTGCTGGGTGCAAAGTGCTGGGTTCTGGGTTTCTGGATTCGCGGGCCGTTCAC ACGTAGCCTGTGCCGGCTCCTCGGGTGAGTCCGTCCGCGCGCGGTGCCCCGGGACGGCCTAGGCTGCCGGGGGTCCGGGGCCCCAGGCAT TCCGGGCTGCAGATTGACGGGGATCCCGGATGCACCGCGCGCCCCCGCGCCCTCACCGACGGGTCCAGACCTGGTGGGAAGAAGGTGCGG GGACGGGTCCCTGAGGATCCCGATGCCTACGAGCCAAGATGCTCAGCTTTATAGGTGTGACCTACACATGTGACTTCACCTCAGTTTTGT GATCCGTAAAATGGACAAATTCGAAGCTACTTCACAGTGCTGTTGAGAGGATTAAATGAAACAATGCTTGTAAAGCTCTTTGCAGGAGGG AGCCTCGGAAGCAGGGCCTGGCCGGCAGAGCACACCTGCTGTCACCAGGGACCACAGGCAGCATGAAGACCCCCGTGGAGCTGGCCGTCA GTGGGATGCAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGCCAGGACGTCATATGTGGATGAGACTCTGTTTG GCAGCCCAGCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAAGGCTAACAGAACCAGAGGCGTGGGCAAGGAGG CATCGAAGGCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCACCCCCACCCTCACACCAAGGAAGAAGAACAAAT ACAGTAATAAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATACCCGAAGAGCCTACACCAGTGAGGATGAAGCCT GGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAATGGTGATGAGGACAGTGCTGCTGCCCTCGGCC TGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGCAAGTGACAGCCAAGAAGACCAGGAGAAAAGAA ACTGCCTTGGCACCAGTGAAGCCCAGAGTAATTTGAGTGGAGGAGAAAACCGAGTGCAAGTCCTAAAGACTGTTCCAGTGAACCTTTCCC TAAATCAAGATCACCTGGAGAATTCCAAGCGGGAACAGTACAGCATCAGCTTCCCCGAGAGCTCTGCCATCATCCCGGTGTCGGGAATCA CGGTGGTGAAAGCTGAAGATTTCACACCAGTTTTCATGGCCCCACCTGTGCACTATCCCCGGGGAGATGGGGAAGAGCAACGAGTGGTTA TCTTTGAACAGACTCAGTATGACGTGCCCTCGCTGGCCACCCACAGCGCCTATCTCAAAGACGACCAGCGCAGCACTCCGGACAGCACAT ACAGCGAGAGCTTCAAGGACGCAGCCACAGAGAAATTTCGGAGTGCTTCAGTTGGGGCTGAGGAGTACATGTATGATCAGACATCAAGTG GCACATTTCAGTACACCCTGGAAGCCACCAAATCTCTCCGTCAGAAGCAGGGGGAGGGCCCCATGACCTACCTCAACAAAGGACAGTTCT ATGCCATAACACTCAGCGAGACCGGAGACAACAAATGCTTCCGACACCCCATCAGCAAAGTCAGGAGTGTGGTGATGGTGGTCTTCAGTG AAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCATACGGCGAAGCAGAGGGTCCTTGACATTGCCG ATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGTTTCCTTTACCTGGGACGTGAATGAAGAGGCGA AGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAAAGGACTTCCTTTGATGATTCAGATTGACACAT ACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGTCTTCTGTGACAAAGGAGCAGAAAGAAAAATCC GAGATGAAGAGCGGAAGCAGAACAGGAAGAAAGGGAAAGGCCAGGCCTCCCAAACTCAATGCAACAGCTCCTCTGATGGGAAGTTGGCTG CCATACCTTTACAGAAGAAGAGTGACATCACCTACTTCAAAACCATGCCTGATCTCCACTCACAGCCAGTTCTCTTCATACCTGATGTTC ACTTTGCAAACCTGCAGAGGACCGGACAGGTGTATTACAACACGGATGATGAACGAGAAGGTGGCAGTGTCCTTGTTAAACGGATGTTCC GGCCCATGGAAGAGGAGTTTGGTCCAGTGCCTTCAAAGCAGATGAAAGAAGAAGGGACAAAGCGAGTGCTCTTGTACGTGAGGAAGGAGA CTGACGATGTGTTCGATGCATTGATGTTGAAGTCTCCCACAGTGAAGGGCCTGATGGAAGCGATATCTGAGAAATATGGGCTGCCCGTGG AGAAGATAGCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCTTGGTGAACATGGATGACAACATCATCGAGCACTACTCGAACGAGGACA CCTTCATCCTCAACATGGAGAGCATGGTGGAGGGCTTCAAGGTCACGCTCATGGAAATCTAGCCCTGGGTTTGGCATCCGCTTTGGCTGG AGCTCTCAGTGCGTTCCTCCCTGAGAGAGACAGAAGCCCCAGCCCCAGAACCTGGAGACCCATCTCCCCCATCTCACAACTGCTGTTACA AGACCGTGCTGGGGAGTGGGGCAAGGGACAGGCCCCACTGTCGGTGTGCTTGGCCCATCCACTGGCACCTACCACGGAGCTGAAGCCTGA GCCCCTCAGGAAGGTGCCTTAGGCCTGTTGGATTCCTATTTATTGCCCACCTTTTCCTGGAGCCCAGGTCCAGGCCCGCCAGGACTCTGC AGGTCACTGCTAGCTCCAGATGAGACCGTCCAGCGTTCCCCCTTCAAGAGAAACACTCATCCCGAACAGCCTAAAAAATTCCCATCCCTT CTCTCTCACCCCTCCATATCTATCTCCCGAGTGGCTGGACAAAATGAGCTACGTCTGGGTGCAGTAGTTATAGGTGGGGCAAGAGGTGGA TGCCCACTTTCTGGTCAGACACCTTTAGGTTGCTCTGGGGAAGGCTGTCTTGCTAAATACCTCCAGGGTTCCCAGCAAGTGGCCACCAGG CCTTGTACAGGAAGACATTCAGTCACCGTGTAATTAGTAACACAGAAAGTCTGCCTGTCTGCATTGTACATAGTGTTTATAATATTGTAA TAATATATTTTACCTGTGGTATGTGGGCATGTTTACTGCCACTGGCCTAGAGGAGACACAGACCTGGAGACCGTTTTAATGGGGGTTTTT GCCTCTGTGCCTGTTCAAGAGACTTGCAGGGCTAGGTAGAGGGCCTTTGGGATGTTAAGGTGACTGCAGCTGATGCCAAGATGGACTCTG CAATGGGCATACCTGGGGGCTCGTTCCCTGTCCCCAGAGGAAGCCCCCTCTCCTTCTCCATGGGCATGACTCTCCTTCGAGGCCACCACG TTTATCTCACAATGATGTGTTTTGCTTGACTTTCCCTTTGCGCTGTCTCGTGGGAAAGGTCATTCTGTCTGAGACCCCAGCTCCTTCTCC AGCTTTGGCTGCGGGCATGGCCTGAGCTTTCTGGAGAGCCTCTGCAGGGGGTTTGCCATCAGGGCCCTGTGGCTGGGTCTGCTGCAGAGC TCCTTGGCTATCAGGAGAATCCTGGACACTGTACTGTGCCTCCCAGTTTACAAACACGCCCTTCATCTCAAGTGGCCCTTTAAAAGGCCT GCTGCCATGTGAGAGCTGTGAACAGCTCAGCTCTGAGTCGGCAGGCTGGGGCTTCCTCCTGGGCCACCAGATGGAAAGGGGGTATTGTTT GCCTCACTCCTGGATGCTGCGTTTTAAGGAAGTGAGTGAGAAAGAATGTGCCAAGATACCTGGCTCCTGTGAAACCAGCCTCAGGAGGGA AACTGGGAGAGAGAAGCTGTGGTCTCCTGCTACATGCCCTGGGAGCTGGAAGAGAAAAACACTCCCCTAAACAATCGCAAAATGATGAAC CATCATGGGCCACTGTTCTCTTTGAGGGGACAGGTTTAGGGGTTTGCGTTCGCCCTTGTGGGCTGAAGCACTAGCTTTTTGGTAGCTAGA CACATCCTGCACCCAAAGGTTCTCTACAAAGGCCCAGATTTGTTTGTAAAGCACTTTGACTCTTACCTGGAGGCCCGCTCTCTAAGGGCT TCCTGCGCTCCCACCTCATCTGTCCCTGAGATGCAGAGCAGGATGGAGGGTCTGCTTCTAGCTCAGCTGTTTCTCCTTGAGGTTGCGGAG GAATTGAATTGAATGGGACAGAGGGCAGGTGCTGTGGCCAAGAAGATCTCCGAGCAGCAGTGACGGGGCACCTTGCTGTGTGTCCTCTGG GCATGTTAACCCTTCTGTGGGGCCAAAGGTTTGCATCGTGGATCCAGCTGTGCTCCAGTCTGTCCCCTCCTCCTCCACTCTGACTGCCAC GCCCCGGACCAGCAGCTTGGGGACCCTCCAGGGTACTAATGGGGCTCTGTTCTGAGATGGACAAATTCAGTGTTGGAAATACATGTTGTA CTATGCACTTCCCATGCTCCTAGGGTTAGGAATAGTTTCAAACATGATTGGCAGACATAACAACGGCAAATACTCGGACTGGGGCATAGG ACTCCAGAGTAGGAAAAAGACAAAAGATTTGGCAGCCTGACACAGGCAACCTACCCCTCTCTCTCCAGCCTCTTTATGAAACTGTTTGTT TGCCAGTCCTGCCCTAAGGCAGAAGATGAATTGAAGATGCTGTGCATGTTTCCTAAGTCCTTGAGCAATCATGGTGGTGACAATTGCCAC AAGGGATATGAGGCCAGTGCCACCAGAGGGTGGTGCCAAGTGCCACATCCCTTCCGATCCATTCCCCTCTGCATCCTCGGAGCACCCCAG TTTGCCTTTGATGTGTCCGCTGTGTATGTTAGCTGAACTTTGATGAGCAAAATTTCCTGAGCGAAACACTCCAAAGAGATAGGAAAACTT GCCGCCTCTTCTTTTTTGTCCCTTAATCAAACTCAAATAAGCTTAAAAAAAATCCATGGAAGATCATGGACATGTGAAATGAGCATTTTT TTCTTTTTTTTTTTTAACAAAGTCTGAACTGAACAGAACAAGACTTTTTCCTCATACATCTCCAAATTGTTTAAACTTACTTTATGAGTG TTTGTTTAGAAGTTCGGACCAACAGAAAAATGCAGTCAGATGTCATCTTGGAATTGGTTTCTAAAAGAGTAAGGCATGTCCCTGCCCAGA AACTTAGGAAGCATGAAATAAATCAAATGTTTATTTTCCTTCTTATTTAAAATCATGCAAATGCAACAGAAATAGAGGGTTTGTGCCAAA TGCTATGAACGGCCCTTTCTTAAAGACAAGCAAGGGAGATTGATATATGTACAATTTGCTCTCATGTTTTAAAAAAAAAAAGGTAAATGT AACTTAATAGTTTTGTAAATGGGAGAGGGGGAATCTATAAACTATAAATACAGTTATTTTATTTTTTGTACATTTTTAAGGAGAAAAAAT >In-frame_C12orf52_ENST00000552495_chr12_113624853_+_GRHL2_ENST00000251808_chr8_102555469_+_5727nt CTCCGCTGAGCTTTCGCCAGTGCCTGCGGCCCTCGGCGGCCTAGTACACACGCACCTGAGTGAGTGGCACCAGAGGACCCTCTCCATGTT TAGGGACCTCCTGGGCCTCAGGAGCGTGGCGCCCGCCCCTGGGCGGACTCCCCCCATCCGCGGGCGCGAATGGTCCGGGCCGCGTCCGCA GTGCTGCTGGCTGCTCCCTGGTTGCTGGGTGCAAAGTGCTGGGTTCTGGGTTTCTGGATTCGCGGGCCGTTCACACGTAGCCTGTGCCGG CTCCTCGGGTGAGTCCGTCCGCGCGCGGTGCCCCGGGACGGCCTAGGCTGCCGGGGGTCCGGGGCCCCAGGCATTCCGGGCTGCAGATTG ACGGGGATCCCGGATGCACCGCGCGCCCCCGCGCCCTCACCGACGGGTCCAGACCTGGTGGGAAGAAGGTGCGGGGACGGGTCCCTGAGG ATCCCGATGCCTACGAGCCAAGATGCTCAGGGAGCCTCGGAAGCAGGGCCTGGCCGGCAGAGCACACCTGCTGTCACCAGGGACCACAGG CAGCATGAAGACCCCCGTGGAGCTGGCCGTCAGTGGGATGCAGACCCTCGGCCTTCAGCACCGCTGCCGAGGTGGCTACCGGGTCAAGGC CAGGACGTCATATGTGGATGAGACTCTGTTTGGCAGCCCAGCAGGCACCCGGCCTACCCCACCGGACTTCGATCCGCCCTGGGTGGAGAA GGCTAACAGAACCAGAGGCGTGGGCAAGGAGGCATCGAAGGCCTTGGGGGCAAAGGGGAGCTGTGAGACCACCCCCTCAAGGGGCAGCAC CCCCACCCTCACACCAAGGAAGAAGAACAAATACAGTAATAAAAGACTAGTGGCCTTAGTGCCCATGCCCAGTGACCCTCCATTCAATAC CCGAAGAGCCTACACCAGTGAGGATGAAGCCTGGAAGTCATACTTGGAGAATCCCCTGACAGCAGCCACCAAGGCCATGATGAGCATTAA TGGTGATGAGGACAGTGCTGCTGCCCTCGGCCTGCTCTATGACTACTACAAGGTTCCTCGAGACAAGAGGCTGCTGTCTGTAAGCAAAGC AAGTGACAGCCAAGAAGACCAGGAGAAAAGAAACTGCCTTGGCACCAGTGAAGCCCAGAGTAATTTGAGTGGAGGAGAAAACCGAGTGCA AGTCCTAAAGACTGTTCCAGTGAACCTTTCCCTAAATCAAGATCACCTGGAGAATTCCAAGCGGGAACAGTACAGCATCAGCTTCCCCGA GAGCTCTGCCATCATCCCGGTGTCGGGAATCACGGTGGTGAAAGCTGAAGATTTCACACCAGTTTTCATGGCCCCACCTGTGCACTATCC CCGGGGAGATGGGGAAGAGCAACGAGTGGTTATCTTTGAACAGACTCAGTATGACGTGCCCTCGCTGGCCACCCACAGCGCCTATCTCAA AGACGACCAGCGCAGCACTCCGGACAGCACATACAGCGAGAGCTTCAAGGACGCAGCCACAGAGAAATTTCGGAGTGCTTCAGTTGGGGC TGAGGAGTACATGTATGATCAGACATCAAGTGGCACATTTCAGTACACCCTGGAAGCCACCAAATCTCTCCGTCAGAAGCAGGGGGAGGG CCCCATGACCTACCTCAACAAAGGACAGTTCTATGCCATAACACTCAGCGAGACCGGAGACAACAAATGCTTCCGACACCCCATCAGCAA AGTCAGGAGTGTGGTGATGGTGGTCTTCAGTGAAGACAAAAACAGAGATGAACAGCTCAAATACTGGAAATACTGGCACTCTCGGCAGCA TACGGCGAAGCAGAGGGTCCTTGACATTGCCGATTACAAGGAGAGCTTTAATACGATTGGAAACATTGAAGAGATTGCATATAATGCTGT TTCCTTTACCTGGGACGTGAATGAAGAGGCGAAGATTTTCATCACCGTGAATTGCTTGAGCACAGATTTCTCCTCCCAAAAAGGGGTGAA AGGACTTCCTTTGATGATTCAGATTGACACATACAGTTATAACAATCGTAGCAATAAACCCATTCATAGAGCTTATTGCCAGATCAAGGT CTTCTGTGACAAAGGAGCAGAAAGAAAAATCCGAGATGAAGAGCGGAAGCAGAACAGGAAGAAAGGGAAAGGCCAGGCCTCCCAAACTCA ATGCAACAGCTCCTCTGATGGGAAGTTGGCTGCCATACCTTTACAGAAGAAGAGTGACATCACCTACTTCAAAACCATGCCTGATCTCCA CTCACAGCCAGTTCTCTTCATACCTGATGTTCACTTTGCAAACCTGCAGAGGACCGGACAGGTGTATTACAACACGGATGATGAACGAGA AGGTGGCAGTGTCCTTGTTAAACGGATGTTCCGGCCCATGGAAGAGGAGTTTGGTCCAGTGCCTTCAAAGCAGATGAAAGAAGAAGGGAC AAAGCGAGTGCTCTTGTACGTGAGGAAGGAGACTGACGATGTGTTCGATGCATTGATGTTGAAGTCTCCCACAGTGAAGGGCCTGATGGA AGCGATATCTGAGAAATATGGGCTGCCCGTGGAGAAGATAGCAAAGCTTTACAAGAAAAGCAAAAAAGGCATCTTGGTGAACATGGATGA CAACATCATCGAGCACTACTCGAACGAGGACACCTTCATCCTCAACATGGAGAGCATGGTGGAGGGCTTCAAGGTCACGCTCATGGAAAT CTAGCCCTGGGTTTGGCATCCGCTTTGGCTGGAGCTCTCAGTGCGTTCCTCCCTGAGAGAGACAGAAGCCCCAGCCCCAGAACCTGGAGA CCCATCTCCCCCATCTCACAACTGCTGTTACAAGACCGTGCTGGGGAGTGGGGCAAGGGACAGGCCCCACTGTCGGTGTGCTTGGCCCAT CCACTGGCACCTACCACGGAGCTGAAGCCTGAGCCCCTCAGGAAGGTGCCTTAGGCCTGTTGGATTCCTATTTATTGCCCACCTTTTCCT GGAGCCCAGGTCCAGGCCCGCCAGGACTCTGCAGGTCACTGCTAGCTCCAGATGAGACCGTCCAGCGTTCCCCCTTCAAGAGAAACACTC ATCCCGAACAGCCTAAAAAATTCCCATCCCTTCTCTCTCACCCCTCCATATCTATCTCCCGAGTGGCTGGACAAAATGAGCTACGTCTGG GTGCAGTAGTTATAGGTGGGGCAAGAGGTGGATGCCCACTTTCTGGTCAGACACCTTTAGGTTGCTCTGGGGAAGGCTGTCTTGCTAAAT ACCTCCAGGGTTCCCAGCAAGTGGCCACCAGGCCTTGTACAGGAAGACATTCAGTCACCGTGTAATTAGTAACACAGAAAGTCTGCCTGT CTGCATTGTACATAGTGTTTATAATATTGTAATAATATATTTTACCTGTGGTATGTGGGCATGTTTACTGCCACTGGCCTAGAGGAGACA CAGACCTGGAGACCGTTTTAATGGGGGTTTTTGCCTCTGTGCCTGTTCAAGAGACTTGCAGGGCTAGGTAGAGGGCCTTTGGGATGTTAA GGTGACTGCAGCTGATGCCAAGATGGACTCTGCAATGGGCATACCTGGGGGCTCGTTCCCTGTCCCCAGAGGAAGCCCCCTCTCCTTCTC CATGGGCATGACTCTCCTTCGAGGCCACCACGTTTATCTCACAATGATGTGTTTTGCTTGACTTTCCCTTTGCGCTGTCTCGTGGGAAAG GTCATTCTGTCTGAGACCCCAGCTCCTTCTCCAGCTTTGGCTGCGGGCATGGCCTGAGCTTTCTGGAGAGCCTCTGCAGGGGGTTTGCCA TCAGGGCCCTGTGGCTGGGTCTGCTGCAGAGCTCCTTGGCTATCAGGAGAATCCTGGACACTGTACTGTGCCTCCCAGTTTACAAACACG CCCTTCATCTCAAGTGGCCCTTTAAAAGGCCTGCTGCCATGTGAGAGCTGTGAACAGCTCAGCTCTGAGTCGGCAGGCTGGGGCTTCCTC CTGGGCCACCAGATGGAAAGGGGGTATTGTTTGCCTCACTCCTGGATGCTGCGTTTTAAGGAAGTGAGTGAGAAAGAATGTGCCAAGATA CCTGGCTCCTGTGAAACCAGCCTCAGGAGGGAAACTGGGAGAGAGAAGCTGTGGTCTCCTGCTACATGCCCTGGGAGCTGGAAGAGAAAA ACACTCCCCTAAACAATCGCAAAATGATGAACCATCATGGGCCACTGTTCTCTTTGAGGGGACAGGTTTAGGGGTTTGCGTTCGCCCTTG TGGGCTGAAGCACTAGCTTTTTGGTAGCTAGACACATCCTGCACCCAAAGGTTCTCTACAAAGGCCCAGATTTGTTTGTAAAGCACTTTG ACTCTTACCTGGAGGCCCGCTCTCTAAGGGCTTCCTGCGCTCCCACCTCATCTGTCCCTGAGATGCAGAGCAGGATGGAGGGTCTGCTTC TAGCTCAGCTGTTTCTCCTTGAGGTTGCGGAGGAATTGAATTGAATGGGACAGAGGGCAGGTGCTGTGGCCAAGAAGATCTCCGAGCAGC AGTGACGGGGCACCTTGCTGTGTGTCCTCTGGGCATGTTAACCCTTCTGTGGGGCCAAAGGTTTGCATCGTGGATCCAGCTGTGCTCCAG TCTGTCCCCTCCTCCTCCACTCTGACTGCCACGCCCCGGACCAGCAGCTTGGGGACCCTCCAGGGTACTAATGGGGCTCTGTTCTGAGAT GGACAAATTCAGTGTTGGAAATACATGTTGTACTATGCACTTCCCATGCTCCTAGGGTTAGGAATAGTTTCAAACATGATTGGCAGACAT AACAACGGCAAATACTCGGACTGGGGCATAGGACTCCAGAGTAGGAAAAAGACAAAAGATTTGGCAGCCTGACACAGGCAACCTACCCCT CTCTCTCCAGCCTCTTTATGAAACTGTTTGTTTGCCAGTCCTGCCCTAAGGCAGAAGATGAATTGAAGATGCTGTGCATGTTTCCTAAGT CCTTGAGCAATCATGGTGGTGACAATTGCCACAAGGGATATGAGGCCAGTGCCACCAGAGGGTGGTGCCAAGTGCCACATCCCTTCCGAT CCATTCCCCTCTGCATCCTCGGAGCACCCCAGTTTGCCTTTGATGTGTCCGCTGTGTATGTTAGCTGAACTTTGATGAGCAAAATTTCCT GAGCGAAACACTCCAAAGAGATAGGAAAACTTGCCGCCTCTTCTTTTTTGTCCCTTAATCAAACTCAAATAAGCTTAAAAAAAATCCATG GAAGATCATGGACATGTGAAATGAGCATTTTTTTCTTTTTTTTTTTTAACAAAGTCTGAACTGAACAGAACAAGACTTTTTCCTCATACA TCTCCAAATTGTTTAAACTTACTTTATGAGTGTTTGTTTAGAAGTTCGGACCAACAGAAAAATGCAGTCAGATGTCATCTTGGAATTGGT TTCTAAAAGAGTAAGGCATGTCCCTGCCCAGAAACTTAGGAAGCATGAAATAAATCAAATGTTTATTTTCCTTCTTATTTAAAATCATGC AAATGCAACAGAAATAGAGGGTTTGTGCCAAATGCTATGAACGGCCCTTTCTTAAAGACAAGCAAGGGAGATTGATATATGTACAATTTG CTCTCATGTTTTAAAAAAAAAAAGGTAAATGTAACTTAATAGTTTTGTAAATGGGAGAGGGGGAATCTATAAACTATAAATACAGTTATT |
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FusionGenePPI for C12orf52_GRHL2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
C12orf52 | GRHL2 | GRHL3, APP, LMO4, GRHL1, FOXA1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for C12orf52_GRHL2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for C12orf52_GRHL2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | GRHL2 | C4014987 | ECTODERMAL DYSPLASIA/SHORT STATURE SYNDROME | 1 | ORPHANET;UNIPROT |