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Fusion gene ID: 4467 |
FusionGeneSummary for BRWD1_DSCAM |
Fusion gene summary |
Fusion gene information | Fusion gene name: BRWD1_DSCAM | Fusion gene ID: 4467 | Hgene | Tgene | Gene symbol | BRWD1 | DSCAM | Gene ID | 54014 | 1826 |
Gene name | bromodomain and WD repeat domain containing 1 | DS cell adhesion molecule | |
Synonyms | C21orf107|DCAF19|N143|WDR9|WRD9 | CHD2|CHD2-42|CHD2-52 | |
Cytomap | 21q22.2 | 21q22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | bromodomain and WD repeat-containing protein 1WD repeat protein WDR9-form2WD repeat-containing protein 9transcriptional unit N143 | Down syndrome cell adhesion molecule | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q9NSI6 | O60469 | |
Ensembl transtripts involved in fusion gene | ENST00000333229, ENST00000342449, ENST00000380800, ENST00000341322, ENST00000470108, | ENST00000400454, | |
Fusion gene scores | * DoF score | 14 X 13 X 8=1456 | 9 X 6 X 5=270 |
# samples | 15 | 8 | |
** MAII score | log2(15/1456*10)=-3.27897594970282 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/270*10)=-1.75488750216347 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: BRWD1 [Title/Abstract] AND DSCAM [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | DSCAM | GO:0042327 | positive regulation of phosphorylation | 19196994 |
Tgene | DSCAM | GO:0048842 | positive regulation of axon extension involved in axon guidance | 18585357 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | OV | TCGA-24-2289-01A | BRWD1 | chr21 | 40641825 | - | DSCAM | chr21 | 41385313 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000333229 | ENST00000400454 | BRWD1 | chr21 | 40641825 | - | DSCAM | chr21 | 41385313 | - |
In-frame | ENST00000342449 | ENST00000400454 | BRWD1 | chr21 | 40641825 | - | DSCAM | chr21 | 41385313 | - |
In-frame | ENST00000380800 | ENST00000400454 | BRWD1 | chr21 | 40641825 | - | DSCAM | chr21 | 41385313 | - |
intron-3CDS | ENST00000341322 | ENST00000400454 | BRWD1 | chr21 | 40641825 | - | DSCAM | chr21 | 41385313 | - |
intron-3CDS | ENST00000470108 | ENST00000400454 | BRWD1 | chr21 | 40641825 | - | DSCAM | chr21 | 41385313 | - |
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FusionProtFeatures for BRWD1_DSCAM |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
BRWD1 | DSCAM |
Cell adhesion molecule that plays a role in neuronalself-avoidance. Promotes repulsion between specific neuronalprocesses of either the same cell or the same subtype of cells.Mediates within retinal amacrine and ganglion cell subtypes bothisoneuronal self-avoidance for creating an orderly dendriticarborization and heteroneuronal self-avoidance to maintain themosaic spacing between amacrine and ganglion cell bodies(PubMed:10925149). Receptor for netrin required for axon guidanceindependently of and in collaboration with the receptor DCC. Inspinal chord development plays a role in guiding commissural axonsprojection and pathfinding across the ventral midline to reach thefloor plate upon ligand binding (PubMed:18585357,PubMed:19196994). Enhances netrin-induced phosphorylation of PAK1and FYN (PubMed:15169762). Mediates intracellular signaling bystimulating the activation of MAPK8 and MAP kinase p38(PubMed:18585357, PubMed:19196994). Adhesion molecule thatpromotes lamina-specific synaptic connections in the retina:expressed in specific subsets of interneurons and retinal ganglioncells (RGCs) and promotes synaptic connectivity via homophilicinteractions (By similarity). {ECO:0000250|UniProtKB:F1NY98,ECO:0000269|PubMed:10925149, ECO:0000269|PubMed:15169762,ECO:0000269|PubMed:18585357, ECO:0000269|PubMed:19196994}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 184_223 | 510 | 2321 | Repeat | Note=WD 1 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 226_265 | 510 | 2321 | Repeat | Note=WD 2 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 268_311 | 510 | 2321 | Repeat | Note=WD 3 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 322_365 | 510 | 2321 | Repeat | Note=WD 4 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 366_405 | 510 | 2321 | Repeat | Note=WD 5 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 424_463 | 510 | 2321 | Repeat | Note=WD 6 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 466_506 | 510 | 2321 | Repeat | Note=WD 7 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 184_223 | 510 | 2270 | Repeat | Note=WD 1 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 226_265 | 510 | 2270 | Repeat | Note=WD 2 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 268_311 | 510 | 2270 | Repeat | Note=WD 3 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 322_365 | 510 | 2270 | Repeat | Note=WD 4 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 366_405 | 510 | 2270 | Repeat | Note=WD 5 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 424_463 | 510 | 2270 | Repeat | Note=WD 6 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 466_506 | 510 | 2270 | Repeat | Note=WD 7 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 184_223 | 510 | 2200 | Repeat | Note=WD 1 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 226_265 | 510 | 2200 | Repeat | Note=WD 2 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 268_311 | 510 | 2200 | Repeat | Note=WD 3 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 322_365 | 510 | 2200 | Repeat | Note=WD 4 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 366_405 | 510 | 2200 | Repeat | Note=WD 5 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 424_463 | 510 | 2200 | Repeat | Note=WD 6 |
Hgene | BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 466_506 | 510 | 2200 | Repeat | Note=WD 7 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 1539_1548 | 510 | 2321 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 1687_1692 | 510 | 2321 | Compositional bias | Note=Poly-Glu |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 661_668 | 510 | 2321 | Compositional bias | Note=Poly-Gln |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 821_824 | 510 | 2321 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 1539_1548 | -51 | 121 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 1687_1692 | -51 | 121 | Compositional bias | Note=Poly-Glu |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 661_668 | -51 | 121 | Compositional bias | Note=Poly-Gln |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 821_824 | -51 | 121 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 1539_1548 | 510 | 2270 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 1687_1692 | 510 | 2270 | Compositional bias | Note=Poly-Glu |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 661_668 | 510 | 2270 | Compositional bias | Note=Poly-Gln |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 821_824 | 510 | 2270 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 1539_1548 | 510 | 2200 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 1687_1692 | 510 | 2200 | Compositional bias | Note=Poly-Glu |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 661_668 | 510 | 2200 | Compositional bias | Note=Poly-Gln |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 821_824 | 510 | 2200 | Compositional bias | Note=Poly-Ser |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 1177_1247 | 510 | 2321 | Domain | Bromo 1 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 1330_1400 | 510 | 2321 | Domain | Bromo 2 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 1177_1247 | -51 | 121 | Domain | Bromo 1 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 1330_1400 | -51 | 121 | Domain | Bromo 2 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 1177_1247 | 510 | 2270 | Domain | Bromo 1 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 1330_1400 | 510 | 2270 | Domain | Bromo 2 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 1177_1247 | 510 | 2200 | Domain | Bromo 1 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 1330_1400 | 510 | 2200 | Domain | Bromo 2 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000333229 | - | 15 | 42 | 514_553 | 510 | 2321 | Repeat | Note=WD 8 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 184_223 | -51 | 121 | Repeat | Note=WD 1 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 226_265 | -51 | 121 | Repeat | Note=WD 2 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 268_311 | -51 | 121 | Repeat | Note=WD 3 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 322_365 | -51 | 121 | Repeat | Note=WD 4 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 366_405 | -51 | 121 | Repeat | Note=WD 5 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 424_463 | -51 | 121 | Repeat | Note=WD 6 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 466_506 | -51 | 121 | Repeat | Note=WD 7 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000341322 | - | 1 | 5 | 514_553 | -51 | 121 | Repeat | Note=WD 8 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000342449 | - | 15 | 41 | 514_553 | 510 | 2270 | Repeat | Note=WD 8 |
Hgene | >BRWD1 | chr21:40641825 | chr21:41385313 | ENST00000380800 | - | 15 | 42 | 514_553 | 510 | 2200 | Repeat | Note=WD 8 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1091_1187 | 1895 | 2013 | Domain | Fibronectin type-III 3 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1191_1285 | 1895 | 2013 | Domain | Fibronectin type-III 4 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 125_216 | 1895 | 2013 | Domain | Note=Ig-like C2-type 2 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1285_1377 | 1895 | 2013 | Domain | Note=Ig-like C2-type 10 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1379_1473 | 1895 | 2013 | Domain | Fibronectin type-III 5 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1474_1575 | 1895 | 2013 | Domain | Fibronectin type-III 6 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 225_305 | 1895 | 2013 | Domain | Note=Ig-like C2-type 3 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 313_401 | 1895 | 2013 | Domain | Note=Ig-like C2-type 4 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 39_129 | 1895 | 2013 | Domain | Note=Ig-like C2-type 1 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 407_500 | 1895 | 2013 | Domain | Note=Ig-like C2-type 5 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 504_592 | 1895 | 2013 | Domain | Note=Ig-like C2-type 6 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 596_685 | 1895 | 2013 | Domain | Note=Ig-like C2-type 7 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 690_783 | 1895 | 2013 | Domain | Note=Ig-like C2-type 8 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 787_883 | 1895 | 2013 | Domain | Note=Ig-like C2-type 9 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 885_982 | 1895 | 2013 | Domain | Fibronectin type-III 1 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 987_1086 | 1895 | 2013 | Domain | Fibronectin type-III 2 |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1617_2012 | 1895 | 2013 | Topological domain | Cytoplasmic |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 18_1595 | 1895 | 2013 | Topological domain | Extracellular |
Tgene | DSCAM | chr21:40641825 | chr21:41385313 | ENST00000400454 | - | 31 | 33 | 1596_1616 | 1895 | 2013 | Transmembrane | Helical |
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FusionGeneSequence for BRWD1_DSCAM |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_BRWD1_ENST00000333229_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_627aa MAEPSSARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQICQRIGPMLD KEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHR RILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHT GSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEK IAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVL KVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMVTSYICLHTLEWTFCXTEVVQAPAGTXAXD >In-frame_BRWD1_ENST00000342449_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_627aa MAEPSSARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQICQRIGPMLD KEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHR RILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHT GSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEK IAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVL KVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMVTSYICLHTLEWTFCXTEVVQAPAGTXAXD >In-frame_BRWD1_ENST00000380800_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_627aa MAEPSSARRPVPLIESELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLDWEGNEHNRSYEELVLSNKHVAPDHLLQICQRIGPMLD KEIPPSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRGKQLTGCSTFSTAFPGTMYQHIKMHR RILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHT GSITSLQFSPMAKGSQRYMVSTGADGTVCFWQWDLESLKFSPRPLKFTEKPRPGVQMLCSSFSVGGMFLATGSTDHVIRMYFLGFEAPEK IAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLSSEEERFMKPKVTMIAWNQNDSIVVTAVNDHVL KVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMVTSYICLHTLEWTFCXTEVVQAPAGTXAXD |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_BRWD1_ENST00000333229_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_1883nt ATGGCGGAGCCGTCGTCCGCCCGACGCCCGGTGCCTCTCATCGAGTCGGAGCTGTACTTCCTTATCGCCCGGTACCTATCGGCGGGCCCG TGTCGGAGAGCGGCCCAGGTGCTGGTGCAGGAGCTGGAGCAGTACCAGTTGTTGCCGAAGAGATTGGACTGGGAGGGCAACGAGCACAAC AGGAGCTACGAGGAGTTGGTCTTGTCCAATAAGCATGTGGCTCCTGATCATCTTTTGCAAATCTGCCAGCGCATCGGTCCTATGTTGGAT AAAGAAATTCCACCCAGTATTTCAAGAGTCACTTCTTTACTTGGTGCAGGAAGGCAGTCTTTGCTACGTACAGCAAAAGACTGCAGGCAC ACAGTTTGGAAGGGCTCTGCCTTTGCTGCTCTTCATAGAGGAAGACCTCCTGAAATGCCAGTGAATTATGGTTCCCCACCAAATCTTGTG GAGATACATCGAGGAAAACAACTCACAGGGTGTTCCACTTTTAGTACAGCATTTCCAGGAACTATGTATCAGCATATAAAAATGCACAGA AGGATTCTCGGACATCTATCTGCTGTTTACTGTGTAGCATTTGATAGGACAGGACATAGAATCTTTACAGGTTCAGATGACTGTTTGGTA AAGATTTGGTCAACACATAATGGCCGCTTGTTATCTACATTAAGAGGTCATTCTGCAGAAATTTCAGATATGGCAGTAAACTATGAGAAT ACAATGATTGCTGCGGGGAGCTGTGATAAAATTATTAGAGTGTGGTGCTTGAGAACTTGTGCCCCAGTTGCTGTGCTCCAAGGACACACA GGATCAATTACATCTTTACAGTTTAGCCCGATGGCCAAAGGCTCTCAAAGATACATGGTTTCCACTGGTGCTGATGGGACAGTTTGCTTT TGGCAATGGGATTTAGAATCCTTAAAATTTAGCCCACGTCCCCTGAAGTTCACTGAAAAGCCTAGGCCAGGCGTTCAAATGCTTTGTTCT TCTTTTAGTGTTGGTGGTATGTTTTTAGCCACAGGTAGTACTGATCATGTAATCAGAATGTATTTTTTGGGTTTTGAAGCACCCGAAAAA ATCGCAGAACTTGAAAGCCACACTGATAAAGTAGATAGTATCCAATTTTGTAACAATGGTGATCGGTTCCTAAGTGGTAGCAGAGATGGA ACAGCACGGATTTGGAGATTTGAGCAGTTAGAATGGAGGAGCATTTTATTGGATATGGCTACCAGAATCTCAGGGGACTTATCTTCCGAA GAGGAAAGGTTTATGAAACCTAAAGTAACAATGATAGCTTGGAATCAAAATGATAGCATTGTTGTCACAGCTGTGAATGATCATGTCCTC AAAGTGTGGAATTCTTACACTGGACAACTGCTTCATAACTTAATGGGACATGCTGATGAAGTATTTGTTCTGGAGACACATCCCTTTGAT TCCAGAATTATGTTATCTGCAGGACATGATGGCAGCATATTTATATGGGATATTACAAAAGGTACCAAGATGAAACATTATTTTAATATG GTGACCTCATACATTTGCCTCCATACCTTAGAATGGACTTTTTGTTAAACCGAGGTGGTCCAGGCACCAGCAGGGACCTGAGCTTAGGAC AAGCATGCTTGGAACCTCAGAAAAGCCGGACCCTGAAGCGCCCCACGGTCCTGGAGCCCATCCCGATGGAAGCCGCCTCCTCCGCCTCCT CCACGAGAGAAGGACAGTCGTGGCAGCCGGGGGCCGTGGCCACATTACCTCAGCGGGAGGGAGCAGAGCTGGGACAGGCAGCTAAAATGA >In-frame_BRWD1_ENST00000342449_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_1883nt ATGGCGGAGCCGTCGTCCGCCCGACGCCCGGTGCCTCTCATCGAGTCGGAGCTGTACTTCCTTATCGCCCGGTACCTATCGGCGGGCCCG TGTCGGAGAGCGGCCCAGGTGCTGGTGCAGGAGCTGGAGCAGTACCAGTTGTTGCCGAAGAGATTGGACTGGGAGGGCAACGAGCACAAC AGGAGCTACGAGGAGTTGGTCTTGTCCAATAAGCATGTGGCTCCTGATCATCTTTTGCAAATCTGCCAGCGCATCGGTCCTATGTTGGAT AAAGAAATTCCACCCAGTATTTCAAGAGTCACTTCTTTACTTGGTGCAGGAAGGCAGTCTTTGCTACGTACAGCAAAAGACTGCAGGCAC ACAGTTTGGAAGGGCTCTGCCTTTGCTGCTCTTCATAGAGGAAGACCTCCTGAAATGCCAGTGAATTATGGTTCCCCACCAAATCTTGTG GAGATACATCGAGGAAAACAACTCACAGGGTGTTCCACTTTTAGTACAGCATTTCCAGGAACTATGTATCAGCATATAAAAATGCACAGA AGGATTCTCGGACATCTATCTGCTGTTTACTGTGTAGCATTTGATAGGACAGGACATAGAATCTTTACAGGTTCAGATGACTGTTTGGTA AAGATTTGGTCAACACATAATGGCCGCTTGTTATCTACATTAAGAGGTCATTCTGCAGAAATTTCAGATATGGCAGTAAACTATGAGAAT ACAATGATTGCTGCGGGGAGCTGTGATAAAATTATTAGAGTGTGGTGCTTGAGAACTTGTGCCCCAGTTGCTGTGCTCCAAGGACACACA GGATCAATTACATCTTTACAGTTTAGCCCGATGGCCAAAGGCTCTCAAAGATACATGGTTTCCACTGGTGCTGATGGGACAGTTTGCTTT TGGCAATGGGATTTAGAATCCTTAAAATTTAGCCCACGTCCCCTGAAGTTCACTGAAAAGCCTAGGCCAGGCGTTCAAATGCTTTGTTCT TCTTTTAGTGTTGGTGGTATGTTTTTAGCCACAGGTAGTACTGATCATGTAATCAGAATGTATTTTTTGGGTTTTGAAGCACCCGAAAAA ATCGCAGAACTTGAAAGCCACACTGATAAAGTAGATAGTATCCAATTTTGTAACAATGGTGATCGGTTCCTAAGTGGTAGCAGAGATGGA ACAGCACGGATTTGGAGATTTGAGCAGTTAGAATGGAGGAGCATTTTATTGGATATGGCTACCAGAATCTCAGGGGACTTATCTTCCGAA GAGGAAAGGTTTATGAAACCTAAAGTAACAATGATAGCTTGGAATCAAAATGATAGCATTGTTGTCACAGCTGTGAATGATCATGTCCTC AAAGTGTGGAATTCTTACACTGGACAACTGCTTCATAACTTAATGGGACATGCTGATGAAGTATTTGTTCTGGAGACACATCCCTTTGAT TCCAGAATTATGTTATCTGCAGGACATGATGGCAGCATATTTATATGGGATATTACAAAAGGTACCAAGATGAAACATTATTTTAATATG GTGACCTCATACATTTGCCTCCATACCTTAGAATGGACTTTTTGTTAAACCGAGGTGGTCCAGGCACCAGCAGGGACCTGAGCTTAGGAC AAGCATGCTTGGAACCTCAGAAAAGCCGGACCCTGAAGCGCCCCACGGTCCTGGAGCCCATCCCGATGGAAGCCGCCTCCTCCGCCTCCT CCACGAGAGAAGGACAGTCGTGGCAGCCGGGGGCCGTGGCCACATTACCTCAGCGGGAGGGAGCAGAGCTGGGACAGGCAGCTAAAATGA >In-frame_BRWD1_ENST00000380800_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_1883nt ATGGCGGAGCCGTCGTCCGCCCGACGCCCGGTGCCTCTCATCGAGTCGGAGCTGTACTTCCTTATCGCCCGGTACCTATCGGCGGGCCCG TGTCGGAGAGCGGCCCAGGTGCTGGTGCAGGAGCTGGAGCAGTACCAGTTGTTGCCGAAGAGATTGGACTGGGAGGGCAACGAGCACAAC AGGAGCTACGAGGAGTTGGTCTTGTCCAATAAGCATGTGGCTCCTGATCATCTTTTGCAAATCTGCCAGCGCATCGGTCCTATGTTGGAT AAAGAAATTCCACCCAGTATTTCAAGAGTCACTTCTTTACTTGGTGCAGGAAGGCAGTCTTTGCTACGTACAGCAAAAGACTGCAGGCAC ACAGTTTGGAAGGGCTCTGCCTTTGCTGCTCTTCATAGAGGAAGACCTCCTGAAATGCCAGTGAATTATGGTTCCCCACCAAATCTTGTG GAGATACATCGAGGAAAACAACTCACAGGGTGTTCCACTTTTAGTACAGCATTTCCAGGAACTATGTATCAGCATATAAAAATGCACAGA AGGATTCTCGGACATCTATCTGCTGTTTACTGTGTAGCATTTGATAGGACAGGACATAGAATCTTTACAGGTTCAGATGACTGTTTGGTA AAGATTTGGTCAACACATAATGGCCGCTTGTTATCTACATTAAGAGGTCATTCTGCAGAAATTTCAGATATGGCAGTAAACTATGAGAAT ACAATGATTGCTGCGGGGAGCTGTGATAAAATTATTAGAGTGTGGTGCTTGAGAACTTGTGCCCCAGTTGCTGTGCTCCAAGGACACACA GGATCAATTACATCTTTACAGTTTAGCCCGATGGCCAAAGGCTCTCAAAGATACATGGTTTCCACTGGTGCTGATGGGACAGTTTGCTTT TGGCAATGGGATTTAGAATCCTTAAAATTTAGCCCACGTCCCCTGAAGTTCACTGAAAAGCCTAGGCCAGGCGTTCAAATGCTTTGTTCT TCTTTTAGTGTTGGTGGTATGTTTTTAGCCACAGGTAGTACTGATCATGTAATCAGAATGTATTTTTTGGGTTTTGAAGCACCCGAAAAA ATCGCAGAACTTGAAAGCCACACTGATAAAGTAGATAGTATCCAATTTTGTAACAATGGTGATCGGTTCCTAAGTGGTAGCAGAGATGGA ACAGCACGGATTTGGAGATTTGAGCAGTTAGAATGGAGGAGCATTTTATTGGATATGGCTACCAGAATCTCAGGGGACTTATCTTCCGAA GAGGAAAGGTTTATGAAACCTAAAGTAACAATGATAGCTTGGAATCAAAATGATAGCATTGTTGTCACAGCTGTGAATGATCATGTCCTC AAAGTGTGGAATTCTTACACTGGACAACTGCTTCATAACTTAATGGGACATGCTGATGAAGTATTTGTTCTGGAGACACATCCCTTTGAT TCCAGAATTATGTTATCTGCAGGACATGATGGCAGCATATTTATATGGGATATTACAAAAGGTACCAAGATGAAACATTATTTTAATATG GTGACCTCATACATTTGCCTCCATACCTTAGAATGGACTTTTTGTTAAACCGAGGTGGTCCAGGCACCAGCAGGGACCTGAGCTTAGGAC AAGCATGCTTGGAACCTCAGAAAAGCCGGACCCTGAAGCGCCCCACGGTCCTGGAGCCCATCCCGATGGAAGCCGCCTCCTCCGCCTCCT CCACGAGAGAAGGACAGTCGTGGCAGCCGGGGGCCGTGGCCACATTACCTCAGCGGGAGGGAGCAGAGCTGGGACAGGCAGCTAAAATGA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_BRWD1_ENST00000333229_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_4246nt AGGTCTTTGCCTCCGCGTCACTTTCTCCTCATCGAGTCCCCGGAGGCAGAGAGCTGAGCGAGGTTCGCCTCCCCGGGCGGGACACGAGCT CCGGTCCTCTCTTGGCGCAAACCCCCGCCCCCCGCGGAGGGACTACTTTTCGTCTCCCGCGGAGGAACTACTTCCTCCCCCGCGGAGGCG TCGGTCCAGGCGGCGCGCACGGTATGGCGGCGGCGGCGGCGGCGGCGGCGCGCGCCTGAGAAGAGGGGACGCCAGCCCGGTCAGGCCTCG GCGCGGCCTACACGCTCCGCTCGCTCGCTCGCTCCCGCCTCCCGCCCCGCGCCCGGCCATGGCGGAGCCGTCGTCCGCCCGACGCCCGGT GCCTCTCATCGAGTCGGAGCTGTACTTCCTTATCGCCCGGTACCTATCGGCGGGCCCGTGTCGGAGAGCGGCCCAGGTGCTGGTGCAGGA GCTGGAGCAGTACCAGTTGTTGCCGAAGAGATTGGACTGGGAGGGCAACGAGCACAACAGGAGCTACGAGGAGTTGGTCTTGTCCAATAA GCATGTGGCTCCTGATCATCTTTTGCAAATCTGCCAGCGCATCGGTCCTATGTTGGATAAAGAAATTCCACCCAGTATTTCAAGAGTCAC TTCTTTACTTGGTGCAGGAAGGCAGTCTTTGCTACGTACAGCAAAAGACTGCAGGCACACAGTTTGGAAGGGCTCTGCCTTTGCTGCTCT TCATAGAGGAAGACCTCCTGAAATGCCAGTGAATTATGGTTCCCCACCAAATCTTGTGGAGATACATCGAGGAAAACAACTCACAGGGTG TTCCACTTTTAGTACAGCATTTCCAGGAACTATGTATCAGCATATAAAAATGCACAGAAGGATTCTCGGACATCTATCTGCTGTTTACTG TGTAGCATTTGATAGGACAGGACATAGAATCTTTACAGGTTCAGATGACTGTTTGGTAAAGATTTGGTCAACACATAATGGCCGCTTGTT ATCTACATTAAGAGGTCATTCTGCAGAAATTTCAGATATGGCAGTAAACTATGAGAATACAATGATTGCTGCGGGGAGCTGTGATAAAAT TATTAGAGTGTGGTGCTTGAGAACTTGTGCCCCAGTTGCTGTGCTCCAAGGACACACAGGATCAATTACATCTTTACAGTTTAGCCCGAT GGCCAAAGGCTCTCAAAGATACATGGTTTCCACTGGTGCTGATGGGACAGTTTGCTTTTGGCAATGGGATTTAGAATCCTTAAAATTTAG CCCACGTCCCCTGAAGTTCACTGAAAAGCCTAGGCCAGGCGTTCAAATGCTTTGTTCTTCTTTTAGTGTTGGTGGTATGTTTTTAGCCAC AGGTAGTACTGATCATGTAATCAGAATGTATTTTTTGGGTTTTGAAGCACCCGAAAAAATCGCAGAACTTGAAAGCCACACTGATAAAGT AGATAGTATCCAATTTTGTAACAATGGTGATCGGTTCCTAAGTGGTAGCAGAGATGGAACAGCACGGATTTGGAGATTTGAGCAGTTAGA ATGGAGGAGCATTTTATTGGATATGGCTACCAGAATCTCAGGGGACTTATCTTCCGAAGAGGAAAGGTTTATGAAACCTAAAGTAACAAT GATAGCTTGGAATCAAAATGATAGCATTGTTGTCACAGCTGTGAATGATCATGTCCTCAAAGTGTGGAATTCTTACACTGGACAACTGCT TCATAACTTAATGGGACATGCTGATGAAGTATTTGTTCTGGAGACACATCCCTTTGATTCCAGAATTATGTTATCTGCAGGACATGATGG CAGCATATTTATATGGGATATTACAAAAGGTACCAAGATGAAACATTATTTTAATATGGTGACCTCATACATTTGCCTCCATACCTTAGA ATGGACTTTTTGTTAAACCGAGGTGGTCCAGGCACCAGCAGGGACCTGAGCTTAGGACAAGCATGCTTGGAACCTCAGAAAAGCCGGACC CTGAAGCGCCCCACGGTCCTGGAGCCCATCCCGATGGAAGCCGCCTCCTCCGCCTCCTCCACGAGAGAAGGACAGTCGTGGCAGCCGGGG GCCGTGGCCACATTACCTCAGCGGGAGGGAGCAGAGCTGGGACAGGCAGCTAAAATGAGCAGCTCCCAAGAATCACTGCTCGACTCCCGG GGCCATTTGAAAGGAAACAATCCTTACGCAAAATCTTACACCCTGGTATAACAGACAGCATGACTGGACAGCGGTTGTAAATACAATTCA AACAATTCAATCAAAGCTACCTTTTTTTTACGGAATTCCAATATTTATAATTAAAGAAAATTGCCAAAATATATTAAAAAAAAAAAAGAG AAAATACTGAAACCACAGACAGTGCAAAGACTCTCCTGCTTTTTTTCTGTCTGAGTGTGAGCTCCATCCGCCTGGGCATCTGATTTTTTG GGAAAGAAGTCCAGTTTTATGATCTTCACAGGCTATTGCATTTTTACTGATTTTCTACAAAAGTGCATGGGGGGGATTAATTAAACCTTC TGACTGGAAGTTCTATCACACAAGAGGCAAGAAAGAAAACAGGGTGGGTGGGAAATCAGCCTATTTGTGAATTTAAAAGGAACACCGATT TGCGGGCAGGGGAAAACTTCAGTCACGTTTGCACACCTTTCTTTCCCATTAGAAACCGGGTTCTCAATTTGGTCTTCTTTTGTTGTTAAT TAGGATGAGTGCCGTCAGTGAAGGGGTGGGGGGAATCAATTTGGTTTTCTCTCTTGTTTCTTTTTTAATTTAATGAGACACTCTTTGCAT TTTGTCTAAGCGAAATAAAAAAGAAAAGGTTGTCTGCCTTTATTTCCATGTCTGCTTCTCTCGTCTTCTGCCAGTGGCCTGGTCCTCCTT CCCATTGACACTTCTGTTTGGAAACACCAGGCCTGAACCCAGAGCCCAATTCAATAAACCAGAGTCGATACTAACACCCTGAACTCCTCA GGAATCTCCAGGAAGCACAAAGAAGGTGCAGCTCCTGCTCTCAAGCTGGAGAGGACAAAATGCAGGCTGGTCTCCACCGCAACCAGAGGC CAGCCCAAGTATTCGAAGCCCGTCGCAAAGCTCTGCCCCTTGCCTGCCCATGGCCAGAGTTCAACTGACTGTGGCCTATGGGCCAAATCC AGCCTCCTGCTGTTTTTTAAATAAAGTTTTATTGAAACAAGGCCACATGCACTATTTGCTATTGTCTATGGCTGCTTTCATGGCACAATG GTAGAGCTGAATAGTTGCAGCAGAGATGGTATAGCCCATGAAGCCTAAAATATTTATTACCTGGCCCATTACAGGAAACATTTGCCAGAC CCGTGCTCTGGAGTCTGAAATGTAGCCCCAGCTTGCGTGACAAGGGGCAAGATCGTGCATCTTACCCTCCATGACTTTTCCTATCTCCAC TATGCCTGGTATGCAAATTTGTGATAGACCATCTTAATAAACATTGCCTGAATCCTCTGTAACCAGAGGAAAGTGATGTTCCTCTAAAAT CTAAGTTTTTACTTTCCTTTCCCTCACTTTATCTCCCATGTGGCTCATCCTAAGAGAGAATTTACTCATAAATAGTCGGAACTGCATTCT TTATCCCACAACCCTCACAGGGTTTGCTTTATGAAAGAGGATGTAATCCTCCCCTGGCTGCAACACTCCATTCCAGGCTCACTTCCATAA AATGGAAAGATAAACAGGTCTTTGTGTCAGAGATTTGGCATTAACCAGAAAACATGATCAAATATCCACAGCTGCTCAGTCTCCCAGGCT GAAGATTCTCTACAGGCTTCCATTAAGGCCACCAACATAGACTGGTGCCAGTTATTACCATCTTGGGAACATATTCAGAAATGTCTTTCC TTCCCTCCCTCCCTCCTTCTTTCCCATCCTTTCTTCCTTCTATTTATTTTCCAGGCAGGCCCATTTGTCTGCTTAGATTCAGTGACACAG AATGGGTCCAGGACCATGTCAAGACCACCTGCTGATGCTAGTGTTAGATGACTCCAGGAATGTGAGGTGTGCATCCATGGTTTCAGAATG TAATCCGTGTTGACGTGTACTGTTTGCATACTCTCAGACTGTTTTTTTTTTATGCAAAAGAAATGTTACTTTCTGGGGGAAAAAATTAAA AGTCTATCTTTCATCAACCTAAAACTTCTATATCCCCCAAACATAGAAGTTTACCTTTTTAACATTTTTCTCTCAACCTGTACAAAAATA >In-frame_BRWD1_ENST00000342449_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_3997nt CGCCAGCCCGGTCAGGCCTCGGCGCGGCCTACACGCTCCGCTCGCTCGCTCGCTCCCGCCTCCCGCCCCGCGCCCGGCCATGGCGGAGCC GTCGTCCGCCCGACGCCCGGTGCCTCTCATCGAGTCGGAGCTGTACTTCCTTATCGCCCGGTACCTATCGGCGGGCCCGTGTCGGAGAGC GGCCCAGGTGCTGGTGCAGGAGCTGGAGCAGTACCAGTTGTTGCCGAAGAGATTGGACTGGGAGGGCAACGAGCACAACAGGAGCTACGA GGAGTTGGTCTTGTCCAATAAGCATGTGGCTCCTGATCATCTTTTGCAAATCTGCCAGCGCATCGGTCCTATGTTGGATAAAGAAATTCC ACCCAGTATTTCAAGAGTCACTTCTTTACTTGGTGCAGGAAGGCAGTCTTTGCTACGTACAGCAAAAGACTGCAGGCACACAGTTTGGAA GGGCTCTGCCTTTGCTGCTCTTCATAGAGGAAGACCTCCTGAAATGCCAGTGAATTATGGTTCCCCACCAAATCTTGTGGAGATACATCG AGGAAAACAACTCACAGGGTGTTCCACTTTTAGTACAGCATTTCCAGGAACTATGTATCAGCATATAAAAATGCACAGAAGGATTCTCGG ACATCTATCTGCTGTTTACTGTGTAGCATTTGATAGGACAGGACATAGAATCTTTACAGGTTCAGATGACTGTTTGGTAAAGATTTGGTC AACACATAATGGCCGCTTGTTATCTACATTAAGAGGTCATTCTGCAGAAATTTCAGATATGGCAGTAAACTATGAGAATACAATGATTGC TGCGGGGAGCTGTGATAAAATTATTAGAGTGTGGTGCTTGAGAACTTGTGCCCCAGTTGCTGTGCTCCAAGGACACACAGGATCAATTAC ATCTTTACAGTTTAGCCCGATGGCCAAAGGCTCTCAAAGATACATGGTTTCCACTGGTGCTGATGGGACAGTTTGCTTTTGGCAATGGGA TTTAGAATCCTTAAAATTTAGCCCACGTCCCCTGAAGTTCACTGAAAAGCCTAGGCCAGGCGTTCAAATGCTTTGTTCTTCTTTTAGTGT TGGTGGTATGTTTTTAGCCACAGGTAGTACTGATCATGTAATCAGAATGTATTTTTTGGGTTTTGAAGCACCCGAAAAAATCGCAGAACT TGAAAGCCACACTGATAAAGTAGATAGTATCCAATTTTGTAACAATGGTGATCGGTTCCTAAGTGGTAGCAGAGATGGAACAGCACGGAT TTGGAGATTTGAGCAGTTAGAATGGAGGAGCATTTTATTGGATATGGCTACCAGAATCTCAGGGGACTTATCTTCCGAAGAGGAAAGGTT TATGAAACCTAAAGTAACAATGATAGCTTGGAATCAAAATGATAGCATTGTTGTCACAGCTGTGAATGATCATGTCCTCAAAGTGTGGAA TTCTTACACTGGACAACTGCTTCATAACTTAATGGGACATGCTGATGAAGTATTTGTTCTGGAGACACATCCCTTTGATTCCAGAATTAT GTTATCTGCAGGACATGATGGCAGCATATTTATATGGGATATTACAAAAGGTACCAAGATGAAACATTATTTTAATATGGTGACCTCATA CATTTGCCTCCATACCTTAGAATGGACTTTTTGTTAAACCGAGGTGGTCCAGGCACCAGCAGGGACCTGAGCTTAGGACAAGCATGCTTG GAACCTCAGAAAAGCCGGACCCTGAAGCGCCCCACGGTCCTGGAGCCCATCCCGATGGAAGCCGCCTCCTCCGCCTCCTCCACGAGAGAA GGACAGTCGTGGCAGCCGGGGGCCGTGGCCACATTACCTCAGCGGGAGGGAGCAGAGCTGGGACAGGCAGCTAAAATGAGCAGCTCCCAA GAATCACTGCTCGACTCCCGGGGCCATTTGAAAGGAAACAATCCTTACGCAAAATCTTACACCCTGGTATAACAGACAGCATGACTGGAC AGCGGTTGTAAATACAATTCAAACAATTCAATCAAAGCTACCTTTTTTTTACGGAATTCCAATATTTATAATTAAAGAAAATTGCCAAAA TATATTAAAAAAAAAAAAGAGAAAATACTGAAACCACAGACAGTGCAAAGACTCTCCTGCTTTTTTTCTGTCTGAGTGTGAGCTCCATCC GCCTGGGCATCTGATTTTTTGGGAAAGAAGTCCAGTTTTATGATCTTCACAGGCTATTGCATTTTTACTGATTTTCTACAAAAGTGCATG GGGGGGATTAATTAAACCTTCTGACTGGAAGTTCTATCACACAAGAGGCAAGAAAGAAAACAGGGTGGGTGGGAAATCAGCCTATTTGTG AATTTAAAAGGAACACCGATTTGCGGGCAGGGGAAAACTTCAGTCACGTTTGCACACCTTTCTTTCCCATTAGAAACCGGGTTCTCAATT TGGTCTTCTTTTGTTGTTAATTAGGATGAGTGCCGTCAGTGAAGGGGTGGGGGGAATCAATTTGGTTTTCTCTCTTGTTTCTTTTTTAAT TTAATGAGACACTCTTTGCATTTTGTCTAAGCGAAATAAAAAAGAAAAGGTTGTCTGCCTTTATTTCCATGTCTGCTTCTCTCGTCTTCT GCCAGTGGCCTGGTCCTCCTTCCCATTGACACTTCTGTTTGGAAACACCAGGCCTGAACCCAGAGCCCAATTCAATAAACCAGAGTCGAT ACTAACACCCTGAACTCCTCAGGAATCTCCAGGAAGCACAAAGAAGGTGCAGCTCCTGCTCTCAAGCTGGAGAGGACAAAATGCAGGCTG GTCTCCACCGCAACCAGAGGCCAGCCCAAGTATTCGAAGCCCGTCGCAAAGCTCTGCCCCTTGCCTGCCCATGGCCAGAGTTCAACTGAC TGTGGCCTATGGGCCAAATCCAGCCTCCTGCTGTTTTTTAAATAAAGTTTTATTGAAACAAGGCCACATGCACTATTTGCTATTGTCTAT GGCTGCTTTCATGGCACAATGGTAGAGCTGAATAGTTGCAGCAGAGATGGTATAGCCCATGAAGCCTAAAATATTTATTACCTGGCCCAT TACAGGAAACATTTGCCAGACCCGTGCTCTGGAGTCTGAAATGTAGCCCCAGCTTGCGTGACAAGGGGCAAGATCGTGCATCTTACCCTC CATGACTTTTCCTATCTCCACTATGCCTGGTATGCAAATTTGTGATAGACCATCTTAATAAACATTGCCTGAATCCTCTGTAACCAGAGG AAAGTGATGTTCCTCTAAAATCTAAGTTTTTACTTTCCTTTCCCTCACTTTATCTCCCATGTGGCTCATCCTAAGAGAGAATTTACTCAT AAATAGTCGGAACTGCATTCTTTATCCCACAACCCTCACAGGGTTTGCTTTATGAAAGAGGATGTAATCCTCCCCTGGCTGCAACACTCC ATTCCAGGCTCACTTCCATAAAATGGAAAGATAAACAGGTCTTTGTGTCAGAGATTTGGCATTAACCAGAAAACATGATCAAATATCCAC AGCTGCTCAGTCTCCCAGGCTGAAGATTCTCTACAGGCTTCCATTAAGGCCACCAACATAGACTGGTGCCAGTTATTACCATCTTGGGAA CATATTCAGAAATGTCTTTCCTTCCCTCCCTCCCTCCTTCTTTCCCATCCTTTCTTCCTTCTATTTATTTTCCAGGCAGGCCCATTTGTC TGCTTAGATTCAGTGACACAGAATGGGTCCAGGACCATGTCAAGACCACCTGCTGATGCTAGTGTTAGATGACTCCAGGAATGTGAGGTG TGCATCCATGGTTTCAGAATGTAATCCGTGTTGACGTGTACTGTTTGCATACTCTCAGACTGTTTTTTTTTTATGCAAAAGAAATGTTAC TTTCTGGGGGAAAAAATTAAAAGTCTATCTTTCATCAACCTAAAACTTCTATATCCCCCAAACATAGAAGTTTACCTTTTTAACATTTTT >In-frame_BRWD1_ENST00000380800_chr21_40641825_-_DSCAM_ENST00000400454_chr21_41385313_-_4017nt GCGCGCCTGAGAAGAGGGGACGCCAGCCCGGTCAGGCCTCGGCGCGGCCTACACGCTCCGCTCGCTCGCTCGCTCCCGCCTCCCGCCCCG CGCCCGGCCATGGCGGAGCCGTCGTCCGCCCGACGCCCGGTGCCTCTCATCGAGTCGGAGCTGTACTTCCTTATCGCCCGGTACCTATCG GCGGGCCCGTGTCGGAGAGCGGCCCAGGTGCTGGTGCAGGAGCTGGAGCAGTACCAGTTGTTGCCGAAGAGATTGGACTGGGAGGGCAAC GAGCACAACAGGAGCTACGAGGAGTTGGTCTTGTCCAATAAGCATGTGGCTCCTGATCATCTTTTGCAAATCTGCCAGCGCATCGGTCCT ATGTTGGATAAAGAAATTCCACCCAGTATTTCAAGAGTCACTTCTTTACTTGGTGCAGGAAGGCAGTCTTTGCTACGTACAGCAAAAGAC TGCAGGCACACAGTTTGGAAGGGCTCTGCCTTTGCTGCTCTTCATAGAGGAAGACCTCCTGAAATGCCAGTGAATTATGGTTCCCCACCA AATCTTGTGGAGATACATCGAGGAAAACAACTCACAGGGTGTTCCACTTTTAGTACAGCATTTCCAGGAACTATGTATCAGCATATAAAA ATGCACAGAAGGATTCTCGGACATCTATCTGCTGTTTACTGTGTAGCATTTGATAGGACAGGACATAGAATCTTTACAGGTTCAGATGAC TGTTTGGTAAAGATTTGGTCAACACATAATGGCCGCTTGTTATCTACATTAAGAGGTCATTCTGCAGAAATTTCAGATATGGCAGTAAAC TATGAGAATACAATGATTGCTGCGGGGAGCTGTGATAAAATTATTAGAGTGTGGTGCTTGAGAACTTGTGCCCCAGTTGCTGTGCTCCAA GGACACACAGGATCAATTACATCTTTACAGTTTAGCCCGATGGCCAAAGGCTCTCAAAGATACATGGTTTCCACTGGTGCTGATGGGACA GTTTGCTTTTGGCAATGGGATTTAGAATCCTTAAAATTTAGCCCACGTCCCCTGAAGTTCACTGAAAAGCCTAGGCCAGGCGTTCAAATG CTTTGTTCTTCTTTTAGTGTTGGTGGTATGTTTTTAGCCACAGGTAGTACTGATCATGTAATCAGAATGTATTTTTTGGGTTTTGAAGCA CCCGAAAAAATCGCAGAACTTGAAAGCCACACTGATAAAGTAGATAGTATCCAATTTTGTAACAATGGTGATCGGTTCCTAAGTGGTAGC AGAGATGGAACAGCACGGATTTGGAGATTTGAGCAGTTAGAATGGAGGAGCATTTTATTGGATATGGCTACCAGAATCTCAGGGGACTTA TCTTCCGAAGAGGAAAGGTTTATGAAACCTAAAGTAACAATGATAGCTTGGAATCAAAATGATAGCATTGTTGTCACAGCTGTGAATGAT CATGTCCTCAAAGTGTGGAATTCTTACACTGGACAACTGCTTCATAACTTAATGGGACATGCTGATGAAGTATTTGTTCTGGAGACACAT CCCTTTGATTCCAGAATTATGTTATCTGCAGGACATGATGGCAGCATATTTATATGGGATATTACAAAAGGTACCAAGATGAAACATTAT TTTAATATGGTGACCTCATACATTTGCCTCCATACCTTAGAATGGACTTTTTGTTAAACCGAGGTGGTCCAGGCACCAGCAGGGACCTGA GCTTAGGACAAGCATGCTTGGAACCTCAGAAAAGCCGGACCCTGAAGCGCCCCACGGTCCTGGAGCCCATCCCGATGGAAGCCGCCTCCT CCGCCTCCTCCACGAGAGAAGGACAGTCGTGGCAGCCGGGGGCCGTGGCCACATTACCTCAGCGGGAGGGAGCAGAGCTGGGACAGGCAG CTAAAATGAGCAGCTCCCAAGAATCACTGCTCGACTCCCGGGGCCATTTGAAAGGAAACAATCCTTACGCAAAATCTTACACCCTGGTAT AACAGACAGCATGACTGGACAGCGGTTGTAAATACAATTCAAACAATTCAATCAAAGCTACCTTTTTTTTACGGAATTCCAATATTTATA ATTAAAGAAAATTGCCAAAATATATTAAAAAAAAAAAAGAGAAAATACTGAAACCACAGACAGTGCAAAGACTCTCCTGCTTTTTTTCTG TCTGAGTGTGAGCTCCATCCGCCTGGGCATCTGATTTTTTGGGAAAGAAGTCCAGTTTTATGATCTTCACAGGCTATTGCATTTTTACTG ATTTTCTACAAAAGTGCATGGGGGGGATTAATTAAACCTTCTGACTGGAAGTTCTATCACACAAGAGGCAAGAAAGAAAACAGGGTGGGT GGGAAATCAGCCTATTTGTGAATTTAAAAGGAACACCGATTTGCGGGCAGGGGAAAACTTCAGTCACGTTTGCACACCTTTCTTTCCCAT TAGAAACCGGGTTCTCAATTTGGTCTTCTTTTGTTGTTAATTAGGATGAGTGCCGTCAGTGAAGGGGTGGGGGGAATCAATTTGGTTTTC TCTCTTGTTTCTTTTTTAATTTAATGAGACACTCTTTGCATTTTGTCTAAGCGAAATAAAAAAGAAAAGGTTGTCTGCCTTTATTTCCAT GTCTGCTTCTCTCGTCTTCTGCCAGTGGCCTGGTCCTCCTTCCCATTGACACTTCTGTTTGGAAACACCAGGCCTGAACCCAGAGCCCAA TTCAATAAACCAGAGTCGATACTAACACCCTGAACTCCTCAGGAATCTCCAGGAAGCACAAAGAAGGTGCAGCTCCTGCTCTCAAGCTGG AGAGGACAAAATGCAGGCTGGTCTCCACCGCAACCAGAGGCCAGCCCAAGTATTCGAAGCCCGTCGCAAAGCTCTGCCCCTTGCCTGCCC ATGGCCAGAGTTCAACTGACTGTGGCCTATGGGCCAAATCCAGCCTCCTGCTGTTTTTTAAATAAAGTTTTATTGAAACAAGGCCACATG CACTATTTGCTATTGTCTATGGCTGCTTTCATGGCACAATGGTAGAGCTGAATAGTTGCAGCAGAGATGGTATAGCCCATGAAGCCTAAA ATATTTATTACCTGGCCCATTACAGGAAACATTTGCCAGACCCGTGCTCTGGAGTCTGAAATGTAGCCCCAGCTTGCGTGACAAGGGGCA AGATCGTGCATCTTACCCTCCATGACTTTTCCTATCTCCACTATGCCTGGTATGCAAATTTGTGATAGACCATCTTAATAAACATTGCCT GAATCCTCTGTAACCAGAGGAAAGTGATGTTCCTCTAAAATCTAAGTTTTTACTTTCCTTTCCCTCACTTTATCTCCCATGTGGCTCATC CTAAGAGAGAATTTACTCATAAATAGTCGGAACTGCATTCTTTATCCCACAACCCTCACAGGGTTTGCTTTATGAAAGAGGATGTAATCC TCCCCTGGCTGCAACACTCCATTCCAGGCTCACTTCCATAAAATGGAAAGATAAACAGGTCTTTGTGTCAGAGATTTGGCATTAACCAGA AAACATGATCAAATATCCACAGCTGCTCAGTCTCCCAGGCTGAAGATTCTCTACAGGCTTCCATTAAGGCCACCAACATAGACTGGTGCC AGTTATTACCATCTTGGGAACATATTCAGAAATGTCTTTCCTTCCCTCCCTCCCTCCTTCTTTCCCATCCTTTCTTCCTTCTATTTATTT TCCAGGCAGGCCCATTTGTCTGCTTAGATTCAGTGACACAGAATGGGTCCAGGACCATGTCAAGACCACCTGCTGATGCTAGTGTTAGAT GACTCCAGGAATGTGAGGTGTGCATCCATGGTTTCAGAATGTAATCCGTGTTGACGTGTACTGTTTGCATACTCTCAGACTGTTTTTTTT TTATGCAAAAGAAATGTTACTTTCTGGGGGAAAAAATTAAAAGTCTATCTTTCATCAACCTAAAACTTCTATATCCCCCAAACATAGAAG |
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FusionGenePPI for BRWD1_DSCAM |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
BRWD1 | DDB1, CUL4A, SMARCA4, UBXN7, CALM1, COPS5, APP, CUL3, RDX, APPL1, STAT3, MYO5C, MMGT1 | DSCAM | LGR4 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for BRWD1_DSCAM |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for BRWD1_DSCAM |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | BRWD1 | C0028960 | Oligospermia | 1 | CTD_human |
Tgene | DSCAM | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Tgene | DSCAM | C0236969 | Substance-Related Disorders | 1 | CTD_human |