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Fusion gene ID: 43459 |
FusionGeneSummary for ZNF571_TSHZ3 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ZNF571_TSHZ3 | Fusion gene ID: 43459 | Hgene | Tgene | Gene symbol | ZNF571 | TSHZ3 | Gene ID | 51276 | 57616 |
Gene name | zinc finger protein 571 | teashirt zinc finger homeobox 3 | |
Synonyms | HSPC059 | TSH3|ZNF537 | |
Cytomap | 19q13.12 | 19q12 | |
Type of gene | protein-coding | protein-coding | |
Description | zinc finger protein 571 | teashirt homolog 3teashirt family zinc finger 3zinc finger protein 537 | |
Modification date | 20180522 | 20180523 | |
UniProtAcc | Q7Z3V5 | Q63HK5 | |
Ensembl transtripts involved in fusion gene | ENST00000590751, ENST00000328550, ENST00000593133, ENST00000451802, ENST00000358744, | ENST00000240587, ENST00000558569, | |
Fusion gene scores | * DoF score | 2 X 1 X 1=2 | 4 X 3 X 4=48 |
# samples | 2 | 4 | |
** MAII score | log2(2/2*10)=3.32192809488736 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ZNF571 [Title/Abstract] AND TSHZ3 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation | Transcription factor involved fusion gene, inframe and retained DNA-binding domain. |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | TSHZ3 | GO:0045892 | negative regulation of transcription, DNA-templated | 19343227 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUSC | TCGA-37-A5EN-01A | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000590751 | ENST00000240587 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
5CDS-intron | ENST00000590751 | ENST00000558569 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
Frame-shift | ENST00000328550 | ENST00000240587 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
5CDS-intron | ENST00000328550 | ENST00000558569 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
Frame-shift | ENST00000593133 | ENST00000240587 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
5CDS-intron | ENST00000593133 | ENST00000558569 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
Frame-shift | ENST00000451802 | ENST00000240587 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
5CDS-intron | ENST00000451802 | ENST00000558569 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
In-frame | ENST00000358744 | ENST00000240587 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
5CDS-intron | ENST00000358744 | ENST00000558569 | ZNF571 | chr19 | 38077569 | - | TSHZ3 | chr19 | 31770658 | - |
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FusionProtFeatures for ZNF571_TSHZ3 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ZNF571 | TSHZ3 |
May be involved in transcriptional regulation. | Transcriptional regulator involved in developmentalprocesses. Function in association with APBB1, SET and HDACfactors as a transcriptional repressor, that inhibits theexpression of CASP4. TSHZ3-mediated transcription repressioninvolves the recruitment of histone deacetylases HDAC1 and HDAC2.Associates with chromatin in a region surrounding the CASP4transcriptional start site(s) (PubMed:19343227). Regulates thedevelopment of neurons involved in both respiratory rhythm andairflow control. Promotes maintenance of nucleus ambiguus (nA)motoneurons, which govern upper airway function, and establishes arespiratory rhythm generator (RRG) activity compatible withsurvival at birth. Involved in the differentiation of the proximaluretic smooth muscle cells during developmental processes.Involved in the up-regulation of myocardin, that directs theexpression of smooth muscle cells in the proximal ureter (Bysimilarity). Involved in the modulation of glutamatergic synaptictransmission and long-term synaptic potentiation (By similarity).{ECO:0000250|UniProtKB:Q8CGV9, ECO:0000269|PubMed:19343227}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 606_630 | 13 | 1082 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 142_164 | 13 | 1082 | Compositional bias | Note=Ser-rich |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 493_496 | 13 | 1082 | Compositional bias | Note=Poly-Glu |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 891_961 | 13 | 1082 | DNA binding | Homeobox%3B atypical |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 1041_1064 | 13 | 1082 | Zinc finger | C2H2-type 5 |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 214_238 | 13 | 1082 | Zinc finger | C2H2-type 1 |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 275_299 | 13 | 1082 | Zinc finger | C2H2-type 2 |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 386_404 | 13 | 1082 | Zinc finger | C2H2-type 3%3B atypical |
Tgene | >TSHZ3 | chr19:38077569 | chr19:31770658 | ENST00000240587 | - | 0 | 2 | 976_998 | 13 | 1082 | Zinc finger | C2H2-type 4 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 6_84 | 3 | 1776 | Domain | KRAB |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 6_84 | 3 | 610 | Domain | KRAB |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 6_84 | 3 | 610 | Domain | KRAB |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 6_84 | 3 | 610 | Domain | KRAB |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 139_161 | 3 | 1776 | Zinc finger | C2H2-type 1 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 164_189 | 3 | 1776 | Zinc finger | C2H2-type 2%3B atypical |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 195_217 | 3 | 1776 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 223_245 | 3 | 1776 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 251_273 | 3 | 1776 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 279_301 | 3 | 1776 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 307_329 | 3 | 1776 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 335_357 | 3 | 1776 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 363_385 | 3 | 1776 | Zinc finger | C2H2-type 9 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 391_413 | 3 | 1776 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 419_441 | 3 | 1776 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 447_469 | 3 | 1776 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 474_496 | 3 | 1776 | Zinc finger | C2H2-type 13 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 502_524 | 3 | 1776 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 530_552 | 3 | 1776 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 558_580 | 3 | 1776 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000328550 | - | 2 | 5 | 586_608 | 3 | 1776 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 139_161 | 3 | 610 | Zinc finger | C2H2-type 1 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 164_189 | 3 | 610 | Zinc finger | C2H2-type 2%3B atypical |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 195_217 | 3 | 610 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 223_245 | 3 | 610 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 251_273 | 3 | 610 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 279_301 | 3 | 610 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 307_329 | 3 | 610 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 335_357 | 3 | 610 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 363_385 | 3 | 610 | Zinc finger | C2H2-type 9 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 391_413 | 3 | 610 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 419_441 | 3 | 610 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 447_469 | 3 | 610 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 474_496 | 3 | 610 | Zinc finger | C2H2-type 13 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 502_524 | 3 | 610 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 530_552 | 3 | 610 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 558_580 | 3 | 610 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000358744 | - | 3 | 5 | 586_608 | 3 | 610 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 139_161 | 3 | 610 | Zinc finger | C2H2-type 1 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 164_189 | 3 | 610 | Zinc finger | C2H2-type 2%3B atypical |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 195_217 | 3 | 610 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 223_245 | 3 | 610 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 251_273 | 3 | 610 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 279_301 | 3 | 610 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 307_329 | 3 | 610 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 335_357 | 3 | 610 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 363_385 | 3 | 610 | Zinc finger | C2H2-type 9 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 391_413 | 3 | 610 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 419_441 | 3 | 610 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 447_469 | 3 | 610 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 474_496 | 3 | 610 | Zinc finger | C2H2-type 13 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 502_524 | 3 | 610 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 530_552 | 3 | 610 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 558_580 | 3 | 610 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000451802 | - | 2 | 4 | 586_608 | 3 | 610 | Zinc finger | C2H2-type 17 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 139_161 | 3 | 610 | Zinc finger | C2H2-type 1 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 164_189 | 3 | 610 | Zinc finger | C2H2-type 2%3B atypical |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 195_217 | 3 | 610 | Zinc finger | C2H2-type 3 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 223_245 | 3 | 610 | Zinc finger | C2H2-type 4 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 251_273 | 3 | 610 | Zinc finger | C2H2-type 5 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 279_301 | 3 | 610 | Zinc finger | C2H2-type 6 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 307_329 | 3 | 610 | Zinc finger | C2H2-type 7 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 335_357 | 3 | 610 | Zinc finger | C2H2-type 8 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 363_385 | 3 | 610 | Zinc finger | C2H2-type 9 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 391_413 | 3 | 610 | Zinc finger | C2H2-type 10 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 419_441 | 3 | 610 | Zinc finger | C2H2-type 11 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 447_469 | 3 | 610 | Zinc finger | C2H2-type 12 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 474_496 | 3 | 610 | Zinc finger | C2H2-type 13 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 502_524 | 3 | 610 | Zinc finger | C2H2-type 14 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 530_552 | 3 | 610 | Zinc finger | C2H2-type 15 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 558_580 | 3 | 610 | Zinc finger | C2H2-type 16 |
Hgene | >ZNF571 | chr19:38077569 | chr19:31770658 | ENST00000593133 | - | 2 | 4 | 586_608 | 3 | 610 | Zinc finger | C2H2-type 17 |
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FusionGeneSequence for ZNF571_TSHZ3 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ZNF571_ENST00000590751_chr19_38077569_-_TSHZ3_ENST00000240587_chr19_31770658_-_1071aa MPHPMFPKSXRLLPWWTKVXTQRSIRQMESPRPSTCARRRSSPGPAPATRTPRPPSFPAMKWTASHTSVRPVTEWLTLKAAPSRTKRRPR RSRSHWKTRLCRIAWSRXRPCTTTSSPTPTGPTSTSTCTSPPRRRTTAAAAAAVAAAAAVAAGASTGTRAPWLRRCSRCHRAACSRSPAS SAPCSCTGRAASSMAPSSRGPASSAVRTAALPTTPWWSXRCTXTRRGITATTTMRPITTTPSAGPSLANAPCWKWKGRKTPRRCXSACTV ATPLSPCRIXVSIXSKQNTTKKCLXRNPSLLSPPKSSLPLGRKLPWSWSSPAPQIPQVEPPKPPSQTPTMHFRRTPTLTSRQIIGTATRM GPAMHGTLRPGSRRSXSAWSVGARMTPCRSSLPTXWSLATSSRSPTLLXKRGSPLWRRLSHLPSQPCWMRRSSPCPWQPPPSRPPPIHLP ASPQNXMWRSRRKSTRRKRSLTRNLSKKTSLAKKRRSVTSLPNTITXLKMTXKRVPRGGLISSNPWKTQXHPQSTRPRTALLAGGAIPAS MPPTNFPTXXSCPWARRGRARPXNPCLATVRLSPRRKTRPWSLHPAARRPPCPRQTFMPWRSWXKRSLRKLPKWRRRXRSRMGSFPRPSG PLPPHVAAKSGNPSRWRHPAMGASAARRTAPAPRGMGARMGAPSLSRWRMARSWXSPXPAVXVAARPSSPTTRLNSLLLTLXAPCSQSXT FTWARPPSPPCLPWTPXACFSRXATAWRRRLLWPPRRPCSPRRQTTSTAISTTSTTTSPXTXQKGRVTKAAPWVQCFCHPRPQPRQPPHP RXQRQRHLPSYHSCQTRRYARMPCQIYPICXRTXQRATRQNPPLLPASPRSLTLTGPLWRRLRSRRPPRRGRAASQTGTPSTSXSSRPSL PPASGRPQKGSTSCQTXAPRSGCISPGSPGCPXPPSATGWPTXNTSFEGQVEQSSSKTWTLATPSSFVTIVRPKSGLLPRTSVTXSHTXA >In-frame_ZNF571_ENST00000358744_chr19_38077569_-_TSHZ3_ENST00000240587_chr19_31770658_-_1071aa MPHPMFPKSXRLLPWWTKVXTQRSIRQMESPRPSTCARRRSSPGPAPATRTPRPPSFPAMKWTASHTSVRPVTEWLTLKAAPSRTKRRPR RSRSHWKTRLCRIAWSRXRPCTTTSSPTPTGPTSTSTCTSPPRRRTTAAAAAAVAAAAAVAAGASTGTRAPWLRRCSRCHRAACSRSPAS SAPCSCTGRAASSMAPSSRGPASSAVRTAALPTTPWWSXRCTXTRRGITATTTMRPITTTPSAGPSLANAPCWKWKGRKTPRRCXSACTV ATPLSPCRIXVSIXSKQNTTKKCLXRNPSLLSPPKSSLPLGRKLPWSWSSPAPQIPQVEPPKPPSQTPTMHFRRTPTLTSRQIIGTATRM GPAMHGTLRPGSRRSXSAWSVGARMTPCRSSLPTXWSLATSSRSPTLLXKRGSPLWRRLSHLPSQPCWMRRSSPCPWQPPPSRPPPIHLP ASPQNXMWRSRRKSTRRKRSLTRNLSKKTSLAKKRRSVTSLPNTITXLKMTXKRVPRGGLISSNPWKTQXHPQSTRPRTALLAGGAIPAS MPPTNFPTXXSCPWARRGRARPXNPCLATVRLSPRRKTRPWSLHPAARRPPCPRQTFMPWRSWXKRSLRKLPKWRRRXRSRMGSFPRPSG PLPPHVAAKSGNPSRWRHPAMGASAARRTAPAPRGMGARMGAPSLSRWRMARSWXSPXPAVXVAARPSSPTTRLNSLLLTLXAPCSQSXT FTWARPPSPPCLPWTPXACFSRXATAWRRRLLWPPRRPCSPRRQTTSTAISTTSTTTSPXTXQKGRVTKAAPWVQCFCHPRPQPRQPPHP RXQRQRHLPSYHSCQTRRYARMPCQIYPICXRTXQRATRQNPPLLPASPRSLTLTGPLWRRLRSRRPPRRGRAASQTGTPSTSXSSRPSL PPASGRPQKGSTSCQTXAPRSGCISPGSPGCPXPPSATGWPTXNTSFEGQVEQSSSKTWTLATPSSFVTIVRPKSGLLPRTSVTXSHTXA |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ZNF571_ENST00000590751_chr19_38077569_-_TSHZ3_ENST00000240587_chr19_31770658_-_3215nt ATGCCCCACCCTATGTTTCCGAAGAGTTAAAGGCTGCTGCCCTGGTGGACGAAGGTTTAGACCCAGAGGAGCATACGGCAGATGGAGAGC CCTCGGCCAAGTACATGTGCCCGGAGAAGGAGCTCGCCAGGGCCTGCCCCAGCTACCAGAACTCCCCGGCCGCCGAGTTTTCCTGCCATG AAATGGACAGCGAGTCACACATCAGTGAGACCAGTGACCGAATGGCTGACTTTGAAAGCGGCTCCATCAAGAACGAAGAGGAGACCAAGG AGGTCACGGTCCCACTGGAAGACACGACTGTGTCGGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTCTCCAACTCCTACT GGTCCAACCTCAACCTCAACCTGCACCAGCCCTCCTCGGAGAAGAACAACGGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCTGTG GCAGCGGGAGCTTCGACTGGCACCAGAGCGCCATGGCTAAGACGCTGCAGCAGGTGTCACAGAGCCGCATGCTCCCGGAGCCCAGCCTCT TCAGCACCGTGCAGCTGTACCGGCAGAGCAGCAAGCTCTATGGCTCCATCTTCACGGGGGCCAGCAAGTTCCGCTGTAAGGACTGCAGCG CTGCCTACGACACCCTGGTGGAGTTGACGGTGCACATGAACGAGACGGGGCATTACCGCGACGACAACCATGAGACCGATAACAACAACC CCAAGCGCTGGTCCAAGCCTCGCAAACGCTCCTTGCTGGAAATGGAAGGGAAGGAAGACGCCCAGAAGGTGCTGAAGTGCATGTACTGTG GCCACTCCTTTGAGTCCCTGCAGGATTTGAGTGTCCATATGATCAAAACAAAACACTACCAAAAAGTGCCTCTGAAGGAACCCGTCACTC CTGTCGCCGCCAAAATCATCCCTGCCACTCGGAAGAAAGCTTCCCTGGAGCTGGAGCTCCCCAGCTCCCCAGATTCCACAGGTGGAACCC CCAAAGCCACCATCTCAGACACCAACGATGCACTTCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAATG GGGCCAGCTATGCATGGCACTTTGAGGCCCGGAAGTCGCAGATCCTGAAGTGCATGGAGTGTGGGAGCTCGCATGACACCCTGCAGGAGC TCACTGCCCACATGATGGTCACTGGCCACTTCATCAAGGTCACCAACTCTGCTATGAAAAAGGGGAAGCCCATTGTGGAGACGCCTGTCA CACCTACCATCACAACCCTGCTGGATGAGAAGGTCCAGTCCGTGCCCCTGGCAGCCACCACCTTCACGTCCCCCTCCAATACACCTGCCA GCATCTCCCCAAAACTGAATGTGGAGGTCAAGAAGGAAGTCGACAAGGAGAAAGCGGTCACTGACGAGAAACCTAAGCAAAAAGACAAGC CTGGCGAAGAAGAGGAGAAGTGTGACATCTCTTCCAAATACCATTACTTGACTGAAAATGACTTAGAAGAGAGTCCCAAGGGGGGGCTTG ATATCCTCAAATCCTTGGAAAACACAGTGACATCCGCAATCAACAAGGCCCAGAACGGCACTCCTAGCTGGGGGGGCTATCCCAGCATCC ATGCCGCCTACCAACTTCCCAACATGATGAAGTTGTCCCTGGGCTCGTCGGGGAAGAGCACGCCCCTGAAACCCATGTTTGGCAACAGTG AGATTGTCTCCCCGACGAAAAACCAGACCCTGGTCTCTCCACCCAGCAGCCAGACGTCCCCCATGCCCAAGACAAACTTTCATGCCATGG AGGAGCTGGTGAAAAAGGTCACTGAGAAAGTTGCCAAAGTGGAGGAGAAGATGAAGGAGCCGGATGGGAAGCTTTCCCCGCCCAAGCGGG CCACTCCCTCCCCATGTAGCAGCGAAGTCGGGGAACCCATCAAGATGGAGGCATCCAGCGATGGGGGCTTCCGCAGCCAGGAGAACAGCC CCAGCCCCCCGCGGGATGGGTGCAAGGATGGGAGCCCCCTCGCTGAGCCGGTGGAGAATGGCAAGGAGCTGGTGAAGCCCCTAGCCAGCA GTTTGAGTGGCAGCACGGCCATCATCACCGACCACCCGCCTGAACAGCCTTTTGTTAACCCTTTGAGCGCCCTGCAGTCAGTCATGAACA TTCACCTGGGCAAGGCCGCCAAGCCCTCCCTGCCTGCCCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGCCTGGCGGAGAAGG CTGCTGTGGCCACCCCGCCGCCCCTGCAGTCCAAGAAGGCAGACCACCTCGACCGCTATTTCTACCACGTCAACAACGACCAGCCCATAG ACTTGACAAAAGGGAAGAGTGACAAAGGCTGCTCCTTGGGTTCAGTGCTTCTGTCACCCACGTCCACAGCCCCGGCAACCTCCTCATCCA CGGTGACAACGGCAAAGACATCTGCCGTCGTATCATTCATGTCAAACTCGCCGCTACGCGAGAATGCCTTGTCAGATATATCCGATATGC TGAAGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCCGAGAAGTCTGACATTGACGGGGCCACTCTGGAGG AGGCTGAGGAGTCGACGCCCGCCCAGAAGAGGAAGGGCCGCCAGTCAAACTGGAACCCCCAGCACCTCCTGATCCTCCAGGCCCAGTTTG CCGCCAGCCTCCGGCAGACCTCAGAAGGGAAGTACATCATGTCAGACCTGAGCCCCCAGGAGCGGATGCATATCTCCAGGTTCACCGGGC TGTCCATGACCACCATCAGCCACTGGCTGGCCAACGTGAAATACCAGCTTCGAAGGACAGGTGGAACAAAGTTCCTCAAAAACTTGGACA CTGGCCACCCCGTCTTCTTTTGTAACGATTGTGCGTCCCAAATCAGGACTCCTTCCACGTACATCAGTCACCTAGAGTCACACTTAGGCT TCCGGCTACGGGACTTATCCAAACTGTCCACCGAACAGATTAACAGTCAGATAGCACAAACCAAGTCACCGTCAGAAAAAATGGTGACGT CCTCCCCCGAGGAAGACCTGGGGACTTCCTATCAGTGCAAACTTTGCAATCGGACCTTTGCCAGCAAGCACGCTGTTAAACTTCACCTTA >In-frame_ZNF571_ENST00000358744_chr19_38077569_-_TSHZ3_ENST00000240587_chr19_31770658_-_3215nt ATGCCCCACCCTATGTTTCCGAAGAGTTAAAGGCTGCTGCCCTGGTGGACGAAGGTTTAGACCCAGAGGAGCATACGGCAGATGGAGAGC CCTCGGCCAAGTACATGTGCCCGGAGAAGGAGCTCGCCAGGGCCTGCCCCAGCTACCAGAACTCCCCGGCCGCCGAGTTTTCCTGCCATG AAATGGACAGCGAGTCACACATCAGTGAGACCAGTGACCGAATGGCTGACTTTGAAAGCGGCTCCATCAAGAACGAAGAGGAGACCAAGG AGGTCACGGTCCCACTGGAAGACACGACTGTGTCGGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTCTCCAACTCCTACT GGTCCAACCTCAACCTCAACCTGCACCAGCCCTCCTCGGAGAAGAACAACGGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCTGTG GCAGCGGGAGCTTCGACTGGCACCAGAGCGCCATGGCTAAGACGCTGCAGCAGGTGTCACAGAGCCGCATGCTCCCGGAGCCCAGCCTCT TCAGCACCGTGCAGCTGTACCGGCAGAGCAGCAAGCTCTATGGCTCCATCTTCACGGGGGCCAGCAAGTTCCGCTGTAAGGACTGCAGCG CTGCCTACGACACCCTGGTGGAGTTGACGGTGCACATGAACGAGACGGGGCATTACCGCGACGACAACCATGAGACCGATAACAACAACC CCAAGCGCTGGTCCAAGCCTCGCAAACGCTCCTTGCTGGAAATGGAAGGGAAGGAAGACGCCCAGAAGGTGCTGAAGTGCATGTACTGTG GCCACTCCTTTGAGTCCCTGCAGGATTTGAGTGTCCATATGATCAAAACAAAACACTACCAAAAAGTGCCTCTGAAGGAACCCGTCACTC CTGTCGCCGCCAAAATCATCCCTGCCACTCGGAAGAAAGCTTCCCTGGAGCTGGAGCTCCCCAGCTCCCCAGATTCCACAGGTGGAACCC CCAAAGCCACCATCTCAGACACCAACGATGCACTTCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAATG GGGCCAGCTATGCATGGCACTTTGAGGCCCGGAAGTCGCAGATCCTGAAGTGCATGGAGTGTGGGAGCTCGCATGACACCCTGCAGGAGC TCACTGCCCACATGATGGTCACTGGCCACTTCATCAAGGTCACCAACTCTGCTATGAAAAAGGGGAAGCCCATTGTGGAGACGCCTGTCA CACCTACCATCACAACCCTGCTGGATGAGAAGGTCCAGTCCGTGCCCCTGGCAGCCACCACCTTCACGTCCCCCTCCAATACACCTGCCA GCATCTCCCCAAAACTGAATGTGGAGGTCAAGAAGGAAGTCGACAAGGAGAAAGCGGTCACTGACGAGAAACCTAAGCAAAAAGACAAGC CTGGCGAAGAAGAGGAGAAGTGTGACATCTCTTCCAAATACCATTACTTGACTGAAAATGACTTAGAAGAGAGTCCCAAGGGGGGGCTTG ATATCCTCAAATCCTTGGAAAACACAGTGACATCCGCAATCAACAAGGCCCAGAACGGCACTCCTAGCTGGGGGGGCTATCCCAGCATCC ATGCCGCCTACCAACTTCCCAACATGATGAAGTTGTCCCTGGGCTCGTCGGGGAAGAGCACGCCCCTGAAACCCATGTTTGGCAACAGTG AGATTGTCTCCCCGACGAAAAACCAGACCCTGGTCTCTCCACCCAGCAGCCAGACGTCCCCCATGCCCAAGACAAACTTTCATGCCATGG AGGAGCTGGTGAAAAAGGTCACTGAGAAAGTTGCCAAAGTGGAGGAGAAGATGAAGGAGCCGGATGGGAAGCTTTCCCCGCCCAAGCGGG CCACTCCCTCCCCATGTAGCAGCGAAGTCGGGGAACCCATCAAGATGGAGGCATCCAGCGATGGGGGCTTCCGCAGCCAGGAGAACAGCC CCAGCCCCCCGCGGGATGGGTGCAAGGATGGGAGCCCCCTCGCTGAGCCGGTGGAGAATGGCAAGGAGCTGGTGAAGCCCCTAGCCAGCA GTTTGAGTGGCAGCACGGCCATCATCACCGACCACCCGCCTGAACAGCCTTTTGTTAACCCTTTGAGCGCCCTGCAGTCAGTCATGAACA TTCACCTGGGCAAGGCCGCCAAGCCCTCCCTGCCTGCCCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGCCTGGCGGAGAAGG CTGCTGTGGCCACCCCGCCGCCCCTGCAGTCCAAGAAGGCAGACCACCTCGACCGCTATTTCTACCACGTCAACAACGACCAGCCCATAG ACTTGACAAAAGGGAAGAGTGACAAAGGCTGCTCCTTGGGTTCAGTGCTTCTGTCACCCACGTCCACAGCCCCGGCAACCTCCTCATCCA CGGTGACAACGGCAAAGACATCTGCCGTCGTATCATTCATGTCAAACTCGCCGCTACGCGAGAATGCCTTGTCAGATATATCCGATATGC TGAAGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCCGAGAAGTCTGACATTGACGGGGCCACTCTGGAGG AGGCTGAGGAGTCGACGCCCGCCCAGAAGAGGAAGGGCCGCCAGTCAAACTGGAACCCCCAGCACCTCCTGATCCTCCAGGCCCAGTTTG CCGCCAGCCTCCGGCAGACCTCAGAAGGGAAGTACATCATGTCAGACCTGAGCCCCCAGGAGCGGATGCATATCTCCAGGTTCACCGGGC TGTCCATGACCACCATCAGCCACTGGCTGGCCAACGTGAAATACCAGCTTCGAAGGACAGGTGGAACAAAGTTCCTCAAAAACTTGGACA CTGGCCACCCCGTCTTCTTTTGTAACGATTGTGCGTCCCAAATCAGGACTCCTTCCACGTACATCAGTCACCTAGAGTCACACTTAGGCT TCCGGCTACGGGACTTATCCAAACTGTCCACCGAACAGATTAACAGTCAGATAGCACAAACCAAGTCACCGTCAGAAAAAATGGTGACGT CCTCCCCCGAGGAAGACCTGGGGACTTCCTATCAGTGCAAACTTTGCAATCGGACCTTTGCCAGCAAGCACGCTGTTAAACTTCACCTTA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ZNF571_ENST00000590751_chr19_38077569_-_TSHZ3_ENST00000240587_chr19_31770658_-_5001nt GTCTGCGCCGGCCAGCGCTTGGCCCCTCCCGGGCCGCAGTACTCCTCGTGTGACACGGACATCATTAAGCCAGCTGAGAATCGTGCGGTT ACAGCTGCTGCAGTTTCTTTGCAGACACTGGCTTCTCTGGACTTTGCACACCTCCAGGAGAAGAACCCAGAAAATTGATCAGTTCTAAAA AACCATGCCCCACCCTATGTTTCCGAAGAGTTAAAGGCTGCTGCCCTGGTGGACGAAGGTTTAGACCCAGAGGAGCATACGGCAGATGGA GAGCCCTCGGCCAAGTACATGTGCCCGGAGAAGGAGCTCGCCAGGGCCTGCCCCAGCTACCAGAACTCCCCGGCCGCCGAGTTTTCCTGC CATGAAATGGACAGCGAGTCACACATCAGTGAGACCAGTGACCGAATGGCTGACTTTGAAAGCGGCTCCATCAAGAACGAAGAGGAGACC AAGGAGGTCACGGTCCCACTGGAAGACACGACTGTGTCGGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTCTCCAACTCC TACTGGTCCAACCTCAACCTCAACCTGCACCAGCCCTCCTCGGAGAAGAACAACGGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCAGC TGTGGCAGCGGGAGCTTCGACTGGCACCAGAGCGCCATGGCTAAGACGCTGCAGCAGGTGTCACAGAGCCGCATGCTCCCGGAGCCCAGC CTCTTCAGCACCGTGCAGCTGTACCGGCAGAGCAGCAAGCTCTATGGCTCCATCTTCACGGGGGCCAGCAAGTTCCGCTGTAAGGACTGC AGCGCTGCCTACGACACCCTGGTGGAGTTGACGGTGCACATGAACGAGACGGGGCATTACCGCGACGACAACCATGAGACCGATAACAAC AACCCCAAGCGCTGGTCCAAGCCTCGCAAACGCTCCTTGCTGGAAATGGAAGGGAAGGAAGACGCCCAGAAGGTGCTGAAGTGCATGTAC TGTGGCCACTCCTTTGAGTCCCTGCAGGATTTGAGTGTCCATATGATCAAAACAAAACACTACCAAAAAGTGCCTCTGAAGGAACCCGTC ACTCCTGTCGCCGCCAAAATCATCCCTGCCACTCGGAAGAAAGCTTCCCTGGAGCTGGAGCTCCCCAGCTCCCCAGATTCCACAGGTGGA ACCCCCAAAGCCACCATCTCAGACACCAACGATGCACTTCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAG AATGGGGCCAGCTATGCATGGCACTTTGAGGCCCGGAAGTCGCAGATCCTGAAGTGCATGGAGTGTGGGAGCTCGCATGACACCCTGCAG GAGCTCACTGCCCACATGATGGTCACTGGCCACTTCATCAAGGTCACCAACTCTGCTATGAAAAAGGGGAAGCCCATTGTGGAGACGCCT GTCACACCTACCATCACAACCCTGCTGGATGAGAAGGTCCAGTCCGTGCCCCTGGCAGCCACCACCTTCACGTCCCCCTCCAATACACCT GCCAGCATCTCCCCAAAACTGAATGTGGAGGTCAAGAAGGAAGTCGACAAGGAGAAAGCGGTCACTGACGAGAAACCTAAGCAAAAAGAC AAGCCTGGCGAAGAAGAGGAGAAGTGTGACATCTCTTCCAAATACCATTACTTGACTGAAAATGACTTAGAAGAGAGTCCCAAGGGGGGG CTTGATATCCTCAAATCCTTGGAAAACACAGTGACATCCGCAATCAACAAGGCCCAGAACGGCACTCCTAGCTGGGGGGGCTATCCCAGC ATCCATGCCGCCTACCAACTTCCCAACATGATGAAGTTGTCCCTGGGCTCGTCGGGGAAGAGCACGCCCCTGAAACCCATGTTTGGCAAC AGTGAGATTGTCTCCCCGACGAAAAACCAGACCCTGGTCTCTCCACCCAGCAGCCAGACGTCCCCCATGCCCAAGACAAACTTTCATGCC ATGGAGGAGCTGGTGAAAAAGGTCACTGAGAAAGTTGCCAAAGTGGAGGAGAAGATGAAGGAGCCGGATGGGAAGCTTTCCCCGCCCAAG CGGGCCACTCCCTCCCCATGTAGCAGCGAAGTCGGGGAACCCATCAAGATGGAGGCATCCAGCGATGGGGGCTTCCGCAGCCAGGAGAAC AGCCCCAGCCCCCCGCGGGATGGGTGCAAGGATGGGAGCCCCCTCGCTGAGCCGGTGGAGAATGGCAAGGAGCTGGTGAAGCCCCTAGCC AGCAGTTTGAGTGGCAGCACGGCCATCATCACCGACCACCCGCCTGAACAGCCTTTTGTTAACCCTTTGAGCGCCCTGCAGTCAGTCATG AACATTCACCTGGGCAAGGCCGCCAAGCCCTCCCTGCCTGCCCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGCCTGGCGGAG AAGGCTGCTGTGGCCACCCCGCCGCCCCTGCAGTCCAAGAAGGCAGACCACCTCGACCGCTATTTCTACCACGTCAACAACGACCAGCCC ATAGACTTGACAAAAGGGAAGAGTGACAAAGGCTGCTCCTTGGGTTCAGTGCTTCTGTCACCCACGTCCACAGCCCCGGCAACCTCCTCA TCCACGGTGACAACGGCAAAGACATCTGCCGTCGTATCATTCATGTCAAACTCGCCGCTACGCGAGAATGCCTTGTCAGATATATCCGAT ATGCTGAAGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCCGAGAAGTCTGACATTGACGGGGCCACTCTG GAGGAGGCTGAGGAGTCGACGCCCGCCCAGAAGAGGAAGGGCCGCCAGTCAAACTGGAACCCCCAGCACCTCCTGATCCTCCAGGCCCAG TTTGCCGCCAGCCTCCGGCAGACCTCAGAAGGGAAGTACATCATGTCAGACCTGAGCCCCCAGGAGCGGATGCATATCTCCAGGTTCACC GGGCTGTCCATGACCACCATCAGCCACTGGCTGGCCAACGTGAAATACCAGCTTCGAAGGACAGGTGGAACAAAGTTCCTCAAAAACTTG GACACTGGCCACCCCGTCTTCTTTTGTAACGATTGTGCGTCCCAAATCAGGACTCCTTCCACGTACATCAGTCACCTAGAGTCACACTTA GGCTTCCGGCTACGGGACTTATCCAAACTGTCCACCGAACAGATTAACAGTCAGATAGCACAAACCAAGTCACCGTCAGAAAAAATGGTG ACGTCCTCCCCCGAGGAAGACCTGGGGACTTCCTATCAGTGCAAACTTTGCAATCGGACCTTTGCCAGCAAGCACGCTGTTAAACTTCAC CTTAGCAAAACACACGGGAAATCTCCGGAAGACCACCTTCTGTATGTCTCTGAGTTAGAGAAGCAGTAGCATTTGCTTTTGATAGAAAGG ACTGCAGTTTGCTTTGAGGGAAACTGTGGAAGGCACCTTCAGGCCCCCTCTGACTTGTTGTTCTTGGCACATGTTCTTATTTTAACTGCA GAGAATCACTCTGGGCTGGACTGTTTTGTATAACTGTACAGTGTTTAATAGAGGTGCATAATCAGCTGTTGTTACTGGTAAAATATGAAG GTTAAAATGCAGTGGTAAGTGTTTGGAACTTTGTGTAAACGGGATTTAGTTGTGAGCATCCTCCCGATGCTTCAAGCTGCATGCATTAAC AGACAGTTTAATTAAGCATTTATAACGGAATCAGGCACACCTTTTCCACGAGACTCGAGTGTGCTGGCATTTCTCACCCTTTCATCTTTA GCCCTCTGAGTACTTTGAAGCACTTTTGCATTAATTTGGTTAAAAAATAAAATAAAATAATAATAATGTATGAAGCTCTGTTTTTTAAAC TCCTTACCAGCTTAGTTATAATGAATAATATGAACCTCCATTTATGCAGGTCTGCAGGGGTATAACACGCCTTGAAATTTAAAAGAATAT TATTTTCACATTGAAACATAGATGTATATATTGTATAGATTTCAGACTCTCTTATGAAAAAAAATGTGATTGTGGTTAAATGACCTTTTT CTTGCATTTATAGCAACAGTGTTTTATGCACCTGCTATGCTCTGGGCATAAGCTGTGCCTATGTATAGTGTATATTTCTTTTTTTCTTTT TTTTAAGGTCTATGGGTTTTGTTTTTTACATGCAAACATTGTAAATTATACAGAAGATACCACAGATAGCATTTATAAAGTATACAGAAA CATTATCTGAAAGCAAAGTATGATAGTTTGTTTTGCTATACAGTACATCTATATTGATAGAGGTTCATGTTTAAATTATACATATTTATT AGCATCATATTGTCATTTGTTTTGAGCAGTCTGAATAAACGAGACCGGGAAAGACATCCCTGGCAGGCATCAGAACTATTTTGCACATGA TTTTTAAAGGTATTTATTAGAAATCAAAGAACACTCAAAATAAACTCAGTGCTCAAAGGGTTAAGTCTATTTGAAAAGGTTAAAAAAAAG AACAAAAAAAAAAAAAGAACTTGTACTGTATTTCCTAAACATTGATAAAGCCTTTAAAATGTTTGTACTGTAATACTTTGCTTAAAAGTC ATGAGGCATTCTGTGATCCAACCTCTTTCACTTATTTATAAGCCCTCTTGGTTGCTATTCCATATTGTAGGATGCCTTTCTATTTCAATT GGTAACTTTCTGTTTTGTTCTTCCTAATTATTCTCCCAAGATCCCACACTGCAGCTTTATCTTTAGGCTTATGAAAGGTAACCCGTGGTT ACCGGCTCTCCAAGTGATTCTGTTCTTCTCCATTTTTGGCAGTTAATTTGCAGAAGTAACTGACAGCTGACACCATATGAGAACCTTTGT ATAAAATATTGGCATGTAAACAGCACAGACACCGTAACACACTCTGTGCCCTGTTTGGTTGTTGACAATGAAGCACCATTATGTGACTCT >In-frame_ZNF571_ENST00000358744_chr19_38077569_-_TSHZ3_ENST00000240587_chr19_31770658_-_5007nt GAGCTTGTCTGCGCCGGCCAGCGCTTGGCCCCTCCCGGGCCGCAGTACTCCTCGTGTGACACGGACATCATTAAGCCAGCTGAGAATCGT GCGGTTACAGCTGCTGCAGTTTCTTTGCAGACACTGGCTTCTCTGGACTTTGCACACCTCCAGGAGAAGAACCCAGAAAATTGATCAGTT CTAAAAAACCATGCCCCACCCTATGTTTCCGAAGAGTTAAAGGCTGCTGCCCTGGTGGACGAAGGTTTAGACCCAGAGGAGCATACGGCA GATGGAGAGCCCTCGGCCAAGTACATGTGCCCGGAGAAGGAGCTCGCCAGGGCCTGCCCCAGCTACCAGAACTCCCCGGCCGCCGAGTTT TCCTGCCATGAAATGGACAGCGAGTCACACATCAGTGAGACCAGTGACCGAATGGCTGACTTTGAAAGCGGCTCCATCAAGAACGAAGAG GAGACCAAGGAGGTCACGGTCCCACTGGAAGACACGACTGTGTCGGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTCTCC AACTCCTACTGGTCCAACCTCAACCTCAACCTGCACCAGCCCTCCTCGGAGAAGAACAACGGCAGCAGCAGCAGCAGCAGTAGCAGCAGC AGCAGCTGTGGCAGCGGGAGCTTCGACTGGCACCAGAGCGCCATGGCTAAGACGCTGCAGCAGGTGTCACAGAGCCGCATGCTCCCGGAG CCCAGCCTCTTCAGCACCGTGCAGCTGTACCGGCAGAGCAGCAAGCTCTATGGCTCCATCTTCACGGGGGCCAGCAAGTTCCGCTGTAAG GACTGCAGCGCTGCCTACGACACCCTGGTGGAGTTGACGGTGCACATGAACGAGACGGGGCATTACCGCGACGACAACCATGAGACCGAT AACAACAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGCTCCTTGCTGGAAATGGAAGGGAAGGAAGACGCCCAGAAGGTGCTGAAGTGC ATGTACTGTGGCCACTCCTTTGAGTCCCTGCAGGATTTGAGTGTCCATATGATCAAAACAAAACACTACCAAAAAGTGCCTCTGAAGGAA CCCGTCACTCCTGTCGCCGCCAAAATCATCCCTGCCACTCGGAAGAAAGCTTCCCTGGAGCTGGAGCTCCCCAGCTCCCCAGATTCCACA GGTGGAACCCCCAAAGCCACCATCTCAGACACCAACGATGCACTTCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGC CACCAGAATGGGGCCAGCTATGCATGGCACTTTGAGGCCCGGAAGTCGCAGATCCTGAAGTGCATGGAGTGTGGGAGCTCGCATGACACC CTGCAGGAGCTCACTGCCCACATGATGGTCACTGGCCACTTCATCAAGGTCACCAACTCTGCTATGAAAAAGGGGAAGCCCATTGTGGAG ACGCCTGTCACACCTACCATCACAACCCTGCTGGATGAGAAGGTCCAGTCCGTGCCCCTGGCAGCCACCACCTTCACGTCCCCCTCCAAT ACACCTGCCAGCATCTCCCCAAAACTGAATGTGGAGGTCAAGAAGGAAGTCGACAAGGAGAAAGCGGTCACTGACGAGAAACCTAAGCAA AAAGACAAGCCTGGCGAAGAAGAGGAGAAGTGTGACATCTCTTCCAAATACCATTACTTGACTGAAAATGACTTAGAAGAGAGTCCCAAG GGGGGGCTTGATATCCTCAAATCCTTGGAAAACACAGTGACATCCGCAATCAACAAGGCCCAGAACGGCACTCCTAGCTGGGGGGGCTAT CCCAGCATCCATGCCGCCTACCAACTTCCCAACATGATGAAGTTGTCCCTGGGCTCGTCGGGGAAGAGCACGCCCCTGAAACCCATGTTT GGCAACAGTGAGATTGTCTCCCCGACGAAAAACCAGACCCTGGTCTCTCCACCCAGCAGCCAGACGTCCCCCATGCCCAAGACAAACTTT CATGCCATGGAGGAGCTGGTGAAAAAGGTCACTGAGAAAGTTGCCAAAGTGGAGGAGAAGATGAAGGAGCCGGATGGGAAGCTTTCCCCG CCCAAGCGGGCCACTCCCTCCCCATGTAGCAGCGAAGTCGGGGAACCCATCAAGATGGAGGCATCCAGCGATGGGGGCTTCCGCAGCCAG GAGAACAGCCCCAGCCCCCCGCGGGATGGGTGCAAGGATGGGAGCCCCCTCGCTGAGCCGGTGGAGAATGGCAAGGAGCTGGTGAAGCCC CTAGCCAGCAGTTTGAGTGGCAGCACGGCCATCATCACCGACCACCCGCCTGAACAGCCTTTTGTTAACCCTTTGAGCGCCCTGCAGTCA GTCATGAACATTCACCTGGGCAAGGCCGCCAAGCCCTCCCTGCCTGCCCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGCCTG GCGGAGAAGGCTGCTGTGGCCACCCCGCCGCCCCTGCAGTCCAAGAAGGCAGACCACCTCGACCGCTATTTCTACCACGTCAACAACGAC CAGCCCATAGACTTGACAAAAGGGAAGAGTGACAAAGGCTGCTCCTTGGGTTCAGTGCTTCTGTCACCCACGTCCACAGCCCCGGCAACC TCCTCATCCACGGTGACAACGGCAAAGACATCTGCCGTCGTATCATTCATGTCAAACTCGCCGCTACGCGAGAATGCCTTGTCAGATATA TCCGATATGCTGAAGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCCGAGAAGTCTGACATTGACGGGGCC ACTCTGGAGGAGGCTGAGGAGTCGACGCCCGCCCAGAAGAGGAAGGGCCGCCAGTCAAACTGGAACCCCCAGCACCTCCTGATCCTCCAG GCCCAGTTTGCCGCCAGCCTCCGGCAGACCTCAGAAGGGAAGTACATCATGTCAGACCTGAGCCCCCAGGAGCGGATGCATATCTCCAGG TTCACCGGGCTGTCCATGACCACCATCAGCCACTGGCTGGCCAACGTGAAATACCAGCTTCGAAGGACAGGTGGAACAAAGTTCCTCAAA AACTTGGACACTGGCCACCCCGTCTTCTTTTGTAACGATTGTGCGTCCCAAATCAGGACTCCTTCCACGTACATCAGTCACCTAGAGTCA CACTTAGGCTTCCGGCTACGGGACTTATCCAAACTGTCCACCGAACAGATTAACAGTCAGATAGCACAAACCAAGTCACCGTCAGAAAAA ATGGTGACGTCCTCCCCCGAGGAAGACCTGGGGACTTCCTATCAGTGCAAACTTTGCAATCGGACCTTTGCCAGCAAGCACGCTGTTAAA CTTCACCTTAGCAAAACACACGGGAAATCTCCGGAAGACCACCTTCTGTATGTCTCTGAGTTAGAGAAGCAGTAGCATTTGCTTTTGATA GAAAGGACTGCAGTTTGCTTTGAGGGAAACTGTGGAAGGCACCTTCAGGCCCCCTCTGACTTGTTGTTCTTGGCACATGTTCTTATTTTA ACTGCAGAGAATCACTCTGGGCTGGACTGTTTTGTATAACTGTACAGTGTTTAATAGAGGTGCATAATCAGCTGTTGTTACTGGTAAAAT ATGAAGGTTAAAATGCAGTGGTAAGTGTTTGGAACTTTGTGTAAACGGGATTTAGTTGTGAGCATCCTCCCGATGCTTCAAGCTGCATGC ATTAACAGACAGTTTAATTAAGCATTTATAACGGAATCAGGCACACCTTTTCCACGAGACTCGAGTGTGCTGGCATTTCTCACCCTTTCA TCTTTAGCCCTCTGAGTACTTTGAAGCACTTTTGCATTAATTTGGTTAAAAAATAAAATAAAATAATAATAATGTATGAAGCTCTGTTTT TTAAACTCCTTACCAGCTTAGTTATAATGAATAATATGAACCTCCATTTATGCAGGTCTGCAGGGGTATAACACGCCTTGAAATTTAAAA GAATATTATTTTCACATTGAAACATAGATGTATATATTGTATAGATTTCAGACTCTCTTATGAAAAAAAATGTGATTGTGGTTAAATGAC CTTTTTCTTGCATTTATAGCAACAGTGTTTTATGCACCTGCTATGCTCTGGGCATAAGCTGTGCCTATGTATAGTGTATATTTCTTTTTT TCTTTTTTTTAAGGTCTATGGGTTTTGTTTTTTACATGCAAACATTGTAAATTATACAGAAGATACCACAGATAGCATTTATAAAGTATA CAGAAACATTATCTGAAAGCAAAGTATGATAGTTTGTTTTGCTATACAGTACATCTATATTGATAGAGGTTCATGTTTAAATTATACATA TTTATTAGCATCATATTGTCATTTGTTTTGAGCAGTCTGAATAAACGAGACCGGGAAAGACATCCCTGGCAGGCATCAGAACTATTTTGC ACATGATTTTTAAAGGTATTTATTAGAAATCAAAGAACACTCAAAATAAACTCAGTGCTCAAAGGGTTAAGTCTATTTGAAAAGGTTAAA AAAAAGAACAAAAAAAAAAAAAGAACTTGTACTGTATTTCCTAAACATTGATAAAGCCTTTAAAATGTTTGTACTGTAATACTTTGCTTA AAAGTCATGAGGCATTCTGTGATCCAACCTCTTTCACTTATTTATAAGCCCTCTTGGTTGCTATTCCATATTGTAGGATGCCTTTCTATT TCAATTGGTAACTTTCTGTTTTGTTCTTCCTAATTATTCTCCCAAGATCCCACACTGCAGCTTTATCTTTAGGCTTATGAAAGGTAACCC GTGGTTACCGGCTCTCCAAGTGATTCTGTTCTTCTCCATTTTTGGCAGTTAATTTGCAGAAGTAACTGACAGCTGACACCATATGAGAAC CTTTGTATAAAATATTGGCATGTAAACAGCACAGACACCGTAACACACTCTGTGCCCTGTTTGGTTGTTGACAATGAAGCACCATTATGT |
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FusionGenePPI for ZNF571_TSHZ3 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ZNF571 | CSTF2T, HERC1 | TSHZ3 | APBB1, SOX2, TRIM23, CTBP1, CTBP2, TRIM27, TRAF2, MAD1L1, TAX1BP1, SPAG5, MTUS2, TFIP11, TRIM54, CEP63, CEP70, KRT40, CCDC155, MTA1, PSME3, GPR183, IL13RA2 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ZNF571_TSHZ3 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF571_TSHZ3 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | TSHZ3 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |