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Fusion gene ID: 41840 |
FusionGeneSummary for WDR37_FAM107B |
Fusion gene summary |
Fusion gene information | Fusion gene name: WDR37_FAM107B | Fusion gene ID: 41840 | Hgene | Tgene | Gene symbol | WDR37 | FAM107B | Gene ID | 22884 | 83641 |
Gene name | WD repeat domain 37 | family with sequence similarity 107 member B | |
Synonyms | - | C10orf45|HITS | |
Cytomap | 10p15.3 | 10p13 | |
Type of gene | protein-coding | protein-coding | |
Description | WD repeat-containing protein 37 | protein FAM107BFAM107B/CDNF fusionheat shock-inducible tumor small protein | |
Modification date | 20180523 | 20180519 | |
UniProtAcc | Q9Y2I8 | Q9H098 | |
Ensembl transtripts involved in fusion gene | ENST00000358220, ENST00000381329, ENST00000263150, ENST00000482165, | ENST00000181796, ENST00000378470, ENST00000468747, ENST00000378467, ENST00000378465, ENST00000378458, ENST00000478076, ENST00000378462, ENST00000496330, ENST00000479731, ENST00000471815, | |
Fusion gene scores | * DoF score | 5 X 5 X 4=100 | 9 X 7 X 6=378 |
# samples | 5 | 9 | |
** MAII score | log2(5/100*10)=-1 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(9/378*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: WDR37 [Title/Abstract] AND FAM107B [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | BLCA | TCGA-CU-A3QU-01A | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000358220 | ENST00000181796 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000378470 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000468747 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000378467 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000378465 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000378458 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000478076 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000378462 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000496330 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000479731 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000358220 | ENST00000471815 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
Frame-shift | ENST00000381329 | ENST00000181796 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000378470 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000468747 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000378467 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000378465 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000378458 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000478076 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000378462 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000496330 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000479731 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000381329 | ENST00000471815 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
In-frame | ENST00000263150 | ENST00000181796 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000378470 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000468747 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000378467 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000378465 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000378458 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000478076 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000378462 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000496330 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000479731 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
5CDS-intron | ENST00000263150 | ENST00000471815 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-3CDS | ENST00000482165 | ENST00000181796 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000378470 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000468747 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000378467 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000378465 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000378458 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000478076 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000378462 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000496330 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000479731 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
intron-intron | ENST00000482165 | ENST00000471815 | WDR37 | chr10 | 1142186 | + | FAM107B | chr10 | 14709690 | - |
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FusionProtFeatures for WDR37_FAM107B |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
WDR37 | FAM107B |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 154_194 | 242 | 495 | Repeat | Note=WD 1 |
Hgene | WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 197_236 | 242 | 495 | Repeat | Note=WD 2 |
Hgene | WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 154_194 | 242 | 495 | Repeat | Note=WD 1 |
Hgene | WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 197_236 | 242 | 495 | Repeat | Note=WD 2 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000378458 | - | 0 | 5 | 61_112 | -183 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000378462 | - | 0 | 4 | 61_112 | -60 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000378465 | - | 0 | 4 | 61_112 | -87 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000378467 | - | 0 | 5 | 61_112 | -101 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000378470 | - | 0 | 4 | 61_112 | -96 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000468747 | - | 0 | 4 | 61_112 | -69 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000478076 | - | 0 | 4 | 61_112 | -74 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000479731 | - | 0 | 4 | 61_112 | -48 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
Tgene | >FAM107B | chr10:1142186 | chr10:14709690 | ENST00000496330 | - | 0 | 5 | 61_112 | -83 | 132 | Coiled coil | Ontology_term=ECO:0000255 |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 279_318 | 242 | 495 | Repeat | Note=WD 3 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 321_360 | 242 | 495 | Repeat | Note=WD 4 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 365_403 | 242 | 495 | Repeat | Note=WD 5 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 406_445 | 242 | 495 | Repeat | Note=WD 6 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000263150 | + | 9 | 14 | 452_493 | 242 | 495 | Repeat | Note=WD 7 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 279_318 | 242 | 495 | Repeat | Note=WD 3 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 321_360 | 242 | 495 | Repeat | Note=WD 4 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 365_403 | 242 | 495 | Repeat | Note=WD 5 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 406_445 | 242 | 495 | Repeat | Note=WD 6 |
Hgene | >WDR37 | chr10:1142186 | chr10:14709690 | ENST00000358220 | + | 9 | 14 | 452_493 | 242 | 495 | Repeat | Note=WD 7 |
Tgene | FAM107B | chr10:1142186 | chr10:14709690 | ENST00000181796 | - | 0 | 5 | 61_112 | 137 | 307 | Coiled coil | Ontology_term=ECO:0000255 |
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FusionGeneSequence for WDR37_FAM107B |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_WDR37_ENST00000358220_chr10_1142186_+_FAM107B_ENST00000181796_chr10_14709690_-_412aa MPTESASCSTARQTKQKRKSHSLSIRRTNSSEQERTGLPRDMLEGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELRREIDTLNERL AAEGQAIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVSVAKTQPVVLGTASADHT ALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQPVADTSEEEFREEPKCLELEQKMTSDSPPEDIDH KDSYLITRSIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDL >In-frame_WDR37_ENST00000263150_chr10_1142186_+_FAM107B_ENST00000181796_chr10_14709690_-_412aa MPTESASCSTARQTKQKRKSHSLSIRRTNSSEQERTGLPRDMLEGQDSKLPSSVRSTLLELFGQIEREFENLYIENLELRREIDTLNERL AAEGQAIDGAELSKGQLKTKASHSTSQLSQKLKTTYKASTSKIVSSFKTTTSRAACQLVKEYIGHRDGIWDVSVAKTQPVVLGTASADHT ALLWSIETGKCLVKYAGHVGSVNSIKFHPSEQLALTASGDQTAHIWRYAVQLPTPQPVADTSEEEFREEPKCLELEQKMTSDSPPEDIDH KDSYLITRSIMAEPDYIEDDNPELIRPQKLINPVKTSRNHQDLHRELLMNQKRGLAPQNKPELQKVMEKRKRDQVIKQKEEEAQKKKSDL |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_WDR37_ENST00000358220_chr10_1142186_+_FAM107B_ENST00000181796_chr10_14709690_-_1236nt ATGCCCACAGAAAGCGCAAGTTGTTCGACTGCTCGCCAAACAAAACAGAAGCGCAAATCCCATAGCCTTTCTATACGAAGAACTAACAGC TCGGAGCAGGAGAGGACGGGACTGCCAAGAGACATGTTAGAAGGACAAGATTCTAAACTGCCTTCCTCGGTTCGCAGTACACTTCTGGAA CTGTTTGGTCAAATAGAAAGAGAATTTGAAAACCTTTATATCGAAAACTTAGAATTACGTAGAGAAATCGACACTCTTAATGAACGTTTA GCTGCTGAAGGACAAGCGATTGATGGAGCAGAGCTGAGTAAGGGCCAACTCAAAACAAAAGCCAGTCACAGCACCAGCCAGCTCTCCCAG AAACTGAAGACCACTTACAAGGCTTCCACCAGCAAGATTGTCTCCAGCTTTAAGACCACGACATCGAGAGCTGCCTGCCAGCTCGTGAAG GAGTACATCGGCCACCGGGACGGCATCTGGGATGTCAGCGTGGCCAAGACACAGCCAGTGGTGCTCGGGACTGCATCAGCCGATCACACG GCTTTGCTGTGGAGCATAGAGACAGGGAAGTGCCTAGTCAAGTACGCAGGCCACGTGGGCTCAGTAAATTCTATCAAATTTCATCCCTCA GAGCAGTTGGCTCTCACTGCTTCTGGAGATCAGACTGCTCATATCTGGAGATACGCGGTGCAGCTGCCGACACCCCAGCCTGTTGCTGAC ACTAGTGAAGAAGAATTTCGAGAAGAACCTAAATGCCTCGAGCTGGAGCAGAAAATGACATCAGACAGCCCACCTGAGGATATTGACCAT AAGGACTCATATCTCATTACAAGAAGCATCATGGCCGAGCCAGACTACATAGAAGATGACAATCCTGAACTCATTAGGCCTCAGAAACTG ATCAATCCTGTAAAAACCTCCCGGAACCATCAAGATCTTCACAGAGAACTTCTTATGAATCAAAAAAGGGGTCTTGCTCCTCAGAACAAA CCAGAATTGCAGAAGGTGATGGAAAAAAGAAAACGAGACCAAGTAATAAAGCAGAAGGAAGAAGAAGCACAGAAGAAGAAATCTGACTTG GAAATAGAGCTATTAAAACGGCAGCAGAAGTTGGAGCAGCTTGAACTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCCGAG >In-frame_WDR37_ENST00000263150_chr10_1142186_+_FAM107B_ENST00000181796_chr10_14709690_-_1236nt ATGCCCACAGAAAGCGCAAGTTGTTCGACTGCTCGCCAAACAAAACAGAAGCGCAAATCCCATAGCCTTTCTATACGAAGAACTAACAGC TCGGAGCAGGAGAGGACGGGACTGCCAAGAGACATGTTAGAAGGACAAGATTCTAAACTGCCTTCCTCGGTTCGCAGTACACTTCTGGAA CTGTTTGGTCAAATAGAAAGAGAATTTGAAAACCTTTATATCGAAAACTTAGAATTACGTAGAGAAATCGACACTCTTAATGAACGTTTA GCTGCTGAAGGACAAGCGATTGATGGAGCAGAGCTGAGTAAGGGCCAACTCAAAACAAAAGCCAGTCACAGCACCAGCCAGCTCTCCCAG AAACTGAAGACCACTTACAAGGCTTCCACCAGCAAGATTGTCTCCAGCTTTAAGACCACGACATCGAGAGCTGCCTGCCAGCTCGTGAAG GAGTACATCGGCCACCGGGACGGCATCTGGGATGTCAGCGTGGCCAAGACACAGCCAGTGGTGCTCGGGACTGCATCAGCCGATCACACG GCTTTGCTGTGGAGCATAGAGACAGGGAAGTGCCTAGTCAAGTACGCAGGCCACGTGGGCTCAGTAAATTCTATCAAATTTCATCCCTCA GAGCAGTTGGCTCTCACTGCTTCTGGAGATCAGACTGCTCATATCTGGAGATACGCGGTGCAGCTGCCGACACCCCAGCCTGTTGCTGAC ACTAGTGAAGAAGAATTTCGAGAAGAACCTAAATGCCTCGAGCTGGAGCAGAAAATGACATCAGACAGCCCACCTGAGGATATTGACCAT AAGGACTCATATCTCATTACAAGAAGCATCATGGCCGAGCCAGACTACATAGAAGATGACAATCCTGAACTCATTAGGCCTCAGAAACTG ATCAATCCTGTAAAAACCTCCCGGAACCATCAAGATCTTCACAGAGAACTTCTTATGAATCAAAAAAGGGGTCTTGCTCCTCAGAACAAA CCAGAATTGCAGAAGGTGATGGAAAAAAGAAAACGAGACCAAGTAATAAAGCAGAAGGAAGAAGAAGCACAGAAGAAGAAATCTGACTTG GAAATAGAGCTATTAAAACGGCAGCAGAAGTTGGAGCAGCTTGAACTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCCGAG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_WDR37_ENST00000358220_chr10_1142186_+_FAM107B_ENST00000181796_chr10_14709690_-_4010nt AGAACGATGGCCTTTCTGCGGTGTCTGCGACCGGGACCAAGGCGGAGCAAAGTCGCCGGGGGTGTGGGGTGTTCCACGCTATGTTGGGAG TGTTCGCTTTCGAGCTTATTGCAGGAGTGACCAGGACACTACCTCCTAGAAGTAATGCCCACAGAAAGCGCAAGTTGTTCGACTGCTCGC CAAACAAAACAGAAGCGCAAATCCCATAGCCTTTCTATACGAAGAACTAACAGCTCGGAGCAGGAGAGGACGGGACTGCCAAGAGACATG TTAGAAGGACAAGATTCTAAACTGCCTTCCTCGGTTCGCAGTACACTTCTGGAACTGTTTGGTCAAATAGAAAGAGAATTTGAAAACCTT TATATCGAAAACTTAGAATTACGTAGAGAAATCGACACTCTTAATGAACGTTTAGCTGCTGAAGGACAAGCGATTGATGGAGCAGAGCTG AGTAAGGGCCAACTCAAAACAAAAGCCAGTCACAGCACCAGCCAGCTCTCCCAGAAACTGAAGACCACTTACAAGGCTTCCACCAGCAAG ATTGTCTCCAGCTTTAAGACCACGACATCGAGAGCTGCCTGCCAGCTCGTGAAGGAGTACATCGGCCACCGGGACGGCATCTGGGATGTC AGCGTGGCCAAGACACAGCCAGTGGTGCTCGGGACTGCATCAGCCGATCACACGGCTTTGCTGTGGAGCATAGAGACAGGGAAGTGCCTA GTCAAGTACGCAGGCCACGTGGGCTCAGTAAATTCTATCAAATTTCATCCCTCAGAGCAGTTGGCTCTCACTGCTTCTGGAGATCAGACT GCTCATATCTGGAGATACGCGGTGCAGCTGCCGACACCCCAGCCTGTTGCTGACACTAGTGAAGAAGAATTTCGAGAAGAACCTAAATGC CTCGAGCTGGAGCAGAAAATGACATCAGACAGCCCACCTGAGGATATTGACCATAAGGACTCATATCTCATTACAAGAAGCATCATGGCC GAGCCAGACTACATAGAAGATGACAATCCTGAACTCATTAGGCCTCAGAAACTGATCAATCCTGTAAAAACCTCCCGGAACCATCAAGAT CTTCACAGAGAACTTCTTATGAATCAAAAAAGGGGTCTTGCTCCTCAGAACAAACCAGAATTGCAGAAGGTGATGGAAAAAAGAAAACGA GACCAAGTAATAAAGCAGAAGGAAGAAGAAGCACAGAAGAAGAAATCTGACTTGGAAATAGAGCTATTAAAACGGCAGCAGAAGTTGGAG CAGCTTGAACTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCCGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAGAACAGGC CAAGAAGTCGCCCAAGCCCAGGAGTCCTAGGCTGAGGCTGCACCAAGACCTCGTGTGTCACCCCACAGAGCTGTCTGTGGGTGCCTTCTC AATCTCAGGGCAAAAGCCCCTGGAGAATATTTCAGCCAGCAGAGAATTTTGACTTGCAGTAGGATTTGGTTTGATTTTCCTACGATCTGG GTGGATGCCTTGCCTGTGACAGTTGCAGTTCCTATTCGCCAAATGAAGGGCAGTGCCCCGCACGTAAGTTGGAATGATGGACCTGTGTTC AGAGACTTAACAGAACCAACAAGCAAAACAAGTGAGAACAGGAAAAAGGAAGAGGACACTGGAATCAATTCTTGAGAGTTGCACTACTTG GTTTTTCTTCCATTCCAAGTTTCGTGGGACCCAGAGCCTTTTTTCTTTTAAAAGCTAAAAAACAAGTGTTTAATTCCTCTTTTTGTTATC TGTTAGATAATTGAGATCACCTAGAAATGCGTTTAATCTGTTCACTCACTGTAAATTTTGAGGACCCAGAATTGTCTTGTTTAATTTATA CTTTCACCCCTGTTGCAGTTAACACCAGAGAAGGAACGTGAATGTCGAGCACAGCCACTACCCTTGTTGGCACTTAATTTAGAAATAGGG TGAGAAGTTTAAAAGCCCATCTTGATTTTATTTTCATTCCTTTTGGTTCTCTGTGTAATAATAGCAGGCTACATAGTGACATTCCAGTTC CAAGAAGGTACATCCTGTCCATTCATTAATTGCTTTGATTACTAGGAGGGTTTCTGTTCAGTTTTGTTTTTAAATGTCTTGCTGATCTAG TTCTTTCAGATGGAATAACCTTCCAGTCCCTTAGAGAGTGGAACTAGTCCATATAACCCAGCTTCAGTAGCAAAAGTAGAAGCCGCCACA TCTTTTCATTTCTCCAAGAGGAGAGTGGGGAAGGTTCCCATGACCAGCTGGGCAGTCAGGATTTCTCTAGGCATTCTAATGTGAAATAAG TGTAGACTGCTGTCAAGGAGGCTTCATCAGAAGATGTATAGCATTTGAATGTCTAATGATAATGCATATCATTAGAATCCAAGCTTTGAA AATTTCTGATTAATGCTCATGTATTTCTTTATCTTTGTTTTTCCTTGTGAAGAAAGACTTTCACCACTGTCTGAGTGATGATGCTGTTGA TAAGGATGATGTCGATGACTACTATATTGCATCTCTCAGGAACAGCTGATGGGAAGGGAGGGGCTGCTGAGTTCCCTTGTTCTAGCTAGC AGCACGCTCCTCAGAGAGGGGGCCGAGTTACAGACAGCAGCCGCATTCTCATGCAAAATTAGTTTTAAACTGCTAGTGTGGGCATCGGTA CCTTTTGCCTGGGTGATACCGAAGAATTGTTGAGGATTTAGTATGCTCCGTAGAGACAGTTCAGCCAGTCATTTCTGCATTGGAGAGACT TCTCATACTTTCTTTGAAGACTCATAGAAAGCTGGATCTAGAGCTTTTGAATCCTTAATTAGCACAGTAGAAATTAGCTTTCTATGGGAA TGCTTTAGTGTTAGCAGTTGACAATTAGGCCCATATTCAATCTGAATGGGAACAAAAGTAAATGCAATGATAATATACTGCTAGTTAGAG AAACATGTTAGTTGATTATACCTGAAATGGATTATTTATCTCATCAGCAAGTATTATTTGAATAAAATGAGAAATGCTTAAGAAAAATTG TTGCTCTACAGTAATTTGGTTTCGAAGAATGGAATGGTAACTATTTTTTCCCATCGTTCTTTTGAGAGAAGGAAGTGTGATGACTGATGA TCTTGAAAAGCCCATTTCTGATTGCACGTTGACTGGAATTCTTTCTTTGTGTCTGTGGACTAGCGATGCTGTTTGTAAAATGAAGATTCG GGACTGGCTCATATCTTTTTATCTAACTAGATGTCAGATCTTGAAATCTGTATTCTCGAAGCAATTCTGCCACTTGATCGTATTCACAGG GGCCCTGGTAGGCTCCTTTAGAAGGACCATTTCTGTTCCTAGAGCTTAACTAGAATTCATTCTTCACTGAAAAAAAAAAAAGTTACTTAA GAAAGCATTTCTTTCCTAATCTCACTCAAATCTGCAGAATTATTTGTAATTAGTAATACAAAATCTGGCCAAAAGGAGACTTGTAAATAG CGTAAAGTGGTGTCTTATGCTAAACGGTGGAATGTATAGGCAGAGAAGCTCTTTGAAGTTGTCAGATGAGCTGGGCTCACAAGCCTGATT CAAACAGGCTGTCGGTCTCCTCTCACCCCTTAATACTGTGCAGCCCAAACTCCTAGGACTCTTGAACATCTGAGCAGTTTTGTGCTTTGA GCCACTTTTTGACAAAAATGGCTCCATTTTTCCACAGCGTGGTTTTCTTAAAATAGTTTAATGTTTTATAGTCTCATAGTAGTAGTGTTG CTTTCTAAGCTATAACAGTCGACTTTATTCTTCTACTCTGAAAAATCTTGACTTGTTTGAGTGTATATAATATATATAAAGGGAGCCTTA ATGGATTGGTTTTCATAATTTAATATTTTTTGTATTTGCTCTTGTATAATTGTTTTTAACGGAAAGTATTAAAGAATTGAGGGTGGAATT >In-frame_WDR37_ENST00000263150_chr10_1142186_+_FAM107B_ENST00000181796_chr10_14709690_-_4017nt GCGGTGTCCTGCGCGTCTTCGGGTCAGTACGGGGGGCCGCGTCGTAGGGACTCACTGGCGGTGCGCGACCTGGGCTGGCTCCGGGGGTGG CGGGCGCAGCTGCTGTGACAGCTTATTGCAGGAGTGACCAGGACACTACCTCCTAGAAGTAATGCCCACAGAAAGCGCAAGTTGTTCGAC TGCTCGCCAAACAAAACAGAAGCGCAAATCCCATAGCCTTTCTATACGAAGAACTAACAGCTCGGAGCAGGAGAGGACGGGACTGCCAAG AGACATGTTAGAAGGACAAGATTCTAAACTGCCTTCCTCGGTTCGCAGTACACTTCTGGAACTGTTTGGTCAAATAGAAAGAGAATTTGA AAACCTTTATATCGAAAACTTAGAATTACGTAGAGAAATCGACACTCTTAATGAACGTTTAGCTGCTGAAGGACAAGCGATTGATGGAGC AGAGCTGAGTAAGGGCCAACTCAAAACAAAAGCCAGTCACAGCACCAGCCAGCTCTCCCAGAAACTGAAGACCACTTACAAGGCTTCCAC CAGCAAGATTGTCTCCAGCTTTAAGACCACGACATCGAGAGCTGCCTGCCAGCTCGTGAAGGAGTACATCGGCCACCGGGACGGCATCTG GGATGTCAGCGTGGCCAAGACACAGCCAGTGGTGCTCGGGACTGCATCAGCCGATCACACGGCTTTGCTGTGGAGCATAGAGACAGGGAA GTGCCTAGTCAAGTACGCAGGCCACGTGGGCTCAGTAAATTCTATCAAATTTCATCCCTCAGAGCAGTTGGCTCTCACTGCTTCTGGAGA TCAGACTGCTCATATCTGGAGATACGCGGTGCAGCTGCCGACACCCCAGCCTGTTGCTGACACTAGTGAAGAAGAATTTCGAGAAGAACC TAAATGCCTCGAGCTGGAGCAGAAAATGACATCAGACAGCCCACCTGAGGATATTGACCATAAGGACTCATATCTCATTACAAGAAGCAT CATGGCCGAGCCAGACTACATAGAAGATGACAATCCTGAACTCATTAGGCCTCAGAAACTGATCAATCCTGTAAAAACCTCCCGGAACCA TCAAGATCTTCACAGAGAACTTCTTATGAATCAAAAAAGGGGTCTTGCTCCTCAGAACAAACCAGAATTGCAGAAGGTGATGGAAAAAAG AAAACGAGACCAAGTAATAAAGCAGAAGGAAGAAGAAGCACAGAAGAAGAAATCTGACTTGGAAATAGAGCTATTAAAACGGCAGCAGAA GTTGGAGCAGCTTGAACTTGAGAAGCAGAAATTGCAAGAAGAGCAAGAAAATGCCCCCGAGTTTGTGAAGGTGAAAGGCAATCTCAGGAG AACAGGCCAAGAAGTCGCCCAAGCCCAGGAGTCCTAGGCTGAGGCTGCACCAAGACCTCGTGTGTCACCCCACAGAGCTGTCTGTGGGTG CCTTCTCAATCTCAGGGCAAAAGCCCCTGGAGAATATTTCAGCCAGCAGAGAATTTTGACTTGCAGTAGGATTTGGTTTGATTTTCCTAC GATCTGGGTGGATGCCTTGCCTGTGACAGTTGCAGTTCCTATTCGCCAAATGAAGGGCAGTGCCCCGCACGTAAGTTGGAATGATGGACC TGTGTTCAGAGACTTAACAGAACCAACAAGCAAAACAAGTGAGAACAGGAAAAAGGAAGAGGACACTGGAATCAATTCTTGAGAGTTGCA CTACTTGGTTTTTCTTCCATTCCAAGTTTCGTGGGACCCAGAGCCTTTTTTCTTTTAAAAGCTAAAAAACAAGTGTTTAATTCCTCTTTT TGTTATCTGTTAGATAATTGAGATCACCTAGAAATGCGTTTAATCTGTTCACTCACTGTAAATTTTGAGGACCCAGAATTGTCTTGTTTA ATTTATACTTTCACCCCTGTTGCAGTTAACACCAGAGAAGGAACGTGAATGTCGAGCACAGCCACTACCCTTGTTGGCACTTAATTTAGA AATAGGGTGAGAAGTTTAAAAGCCCATCTTGATTTTATTTTCATTCCTTTTGGTTCTCTGTGTAATAATAGCAGGCTACATAGTGACATT CCAGTTCCAAGAAGGTACATCCTGTCCATTCATTAATTGCTTTGATTACTAGGAGGGTTTCTGTTCAGTTTTGTTTTTAAATGTCTTGCT GATCTAGTTCTTTCAGATGGAATAACCTTCCAGTCCCTTAGAGAGTGGAACTAGTCCATATAACCCAGCTTCAGTAGCAAAAGTAGAAGC CGCCACATCTTTTCATTTCTCCAAGAGGAGAGTGGGGAAGGTTCCCATGACCAGCTGGGCAGTCAGGATTTCTCTAGGCATTCTAATGTG AAATAAGTGTAGACTGCTGTCAAGGAGGCTTCATCAGAAGATGTATAGCATTTGAATGTCTAATGATAATGCATATCATTAGAATCCAAG CTTTGAAAATTTCTGATTAATGCTCATGTATTTCTTTATCTTTGTTTTTCCTTGTGAAGAAAGACTTTCACCACTGTCTGAGTGATGATG CTGTTGATAAGGATGATGTCGATGACTACTATATTGCATCTCTCAGGAACAGCTGATGGGAAGGGAGGGGCTGCTGAGTTCCCTTGTTCT AGCTAGCAGCACGCTCCTCAGAGAGGGGGCCGAGTTACAGACAGCAGCCGCATTCTCATGCAAAATTAGTTTTAAACTGCTAGTGTGGGC ATCGGTACCTTTTGCCTGGGTGATACCGAAGAATTGTTGAGGATTTAGTATGCTCCGTAGAGACAGTTCAGCCAGTCATTTCTGCATTGG AGAGACTTCTCATACTTTCTTTGAAGACTCATAGAAAGCTGGATCTAGAGCTTTTGAATCCTTAATTAGCACAGTAGAAATTAGCTTTCT ATGGGAATGCTTTAGTGTTAGCAGTTGACAATTAGGCCCATATTCAATCTGAATGGGAACAAAAGTAAATGCAATGATAATATACTGCTA GTTAGAGAAACATGTTAGTTGATTATACCTGAAATGGATTATTTATCTCATCAGCAAGTATTATTTGAATAAAATGAGAAATGCTTAAGA AAAATTGTTGCTCTACAGTAATTTGGTTTCGAAGAATGGAATGGTAACTATTTTTTCCCATCGTTCTTTTGAGAGAAGGAAGTGTGATGA CTGATGATCTTGAAAAGCCCATTTCTGATTGCACGTTGACTGGAATTCTTTCTTTGTGTCTGTGGACTAGCGATGCTGTTTGTAAAATGA AGATTCGGGACTGGCTCATATCTTTTTATCTAACTAGATGTCAGATCTTGAAATCTGTATTCTCGAAGCAATTCTGCCACTTGATCGTAT TCACAGGGGCCCTGGTAGGCTCCTTTAGAAGGACCATTTCTGTTCCTAGAGCTTAACTAGAATTCATTCTTCACTGAAAAAAAAAAAAGT TACTTAAGAAAGCATTTCTTTCCTAATCTCACTCAAATCTGCAGAATTATTTGTAATTAGTAATACAAAATCTGGCCAAAAGGAGACTTG TAAATAGCGTAAAGTGGTGTCTTATGCTAAACGGTGGAATGTATAGGCAGAGAAGCTCTTTGAAGTTGTCAGATGAGCTGGGCTCACAAG CCTGATTCAAACAGGCTGTCGGTCTCCTCTCACCCCTTAATACTGTGCAGCCCAAACTCCTAGGACTCTTGAACATCTGAGCAGTTTTGT GCTTTGAGCCACTTTTTGACAAAAATGGCTCCATTTTTCCACAGCGTGGTTTTCTTAAAATAGTTTAATGTTTTATAGTCTCATAGTAGT AGTGTTGCTTTCTAAGCTATAACAGTCGACTTTATTCTTCTACTCTGAAAAATCTTGACTTGTTTGAGTGTATATAATATATATAAAGGG AGCCTTAATGGATTGGTTTTCATAATTTAATATTTTTTGTATTTGCTCTTGTATAATTGTTTTTAACGGAAAGTATTAAAGAATTGAGGG |
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FusionGenePPI for WDR37_FAM107B |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
WDR37 | EWSR1, MOV10, NXF1, CCT3, CCT7, HSPA8, CCT6B, CCT6A, CLUH, TCP1, PACS2, PACS1, SETD2, CCDC101, LRRC46, KRAS, RBM14-RBM4, IQCF1, CCT4, CCT2, TRIM25 | FAM107B | ELAVL1, BAG3, U2AF2, TRIM25 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for WDR37_FAM107B |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for WDR37_FAM107B |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |