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Fusion gene ID: 40947 |
FusionGeneSummary for USMG5_BAIAP2 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: USMG5_BAIAP2 | Fusion gene ID: 40947 | Hgene | Tgene | Gene symbol | USMG5 | BAIAP2 | Gene ID | 10458 |
| Gene name | BAI1 associated protein 2 | ||
| Synonyms | BAP2|FLAF3|IRSP53 | ||
| Cytomap | 17q25.3 | ||
| Type of gene | protein-coding | ||
| Description | brain-specific angiogenesis inhibitor 1-associated protein 2IRS-58IRSp53/58fas ligand-associated factor 3insulin receptor substrate of 53 kDainsulin receptor substrate p53/p58insulin receptor substrate protein of 53 kDa | ||
| Modification date | 20180523 | ||
| UniProtAcc | Q96IX5 | Q9UQB8 | |
| Ensembl transtripts involved in fusion gene | ENST00000369825, ENST00000369811, ENST00000369815, ENST00000337003, ENST00000309579, | ENST00000392411, ENST00000321280, ENST00000428708, ENST00000575712, ENST00000575245, ENST00000435091, ENST00000321300, ENST00000573894, ENST00000416299, | |
| Fusion gene scores | * DoF score | 3 X 3 X 1=9 | 10 X 7 X 6=420 |
| # samples | 5 | 10 | |
| ** MAII score | log2(5/9*10)=2.47393118833241 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(10/420*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: USMG5 [Title/Abstract] AND BAIAP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| ChiTaRS3.1 | BE837027 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| intron-intron | ENST00000369825 | ENST00000392411 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000321280 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000428708 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000575712 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000575245 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000435091 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000321300 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000573894 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369825 | ENST00000416299 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000392411 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000321280 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000428708 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000575712 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000575245 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000435091 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000321300 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000573894 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369811 | ENST00000416299 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000392411 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000321280 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000428708 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000575712 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000575245 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000435091 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000321300 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000573894 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000369815 | ENST00000416299 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000392411 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000321280 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000428708 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000575712 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000575245 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000435091 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000321300 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000573894 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000337003 | ENST00000416299 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000392411 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000321280 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000428708 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000575712 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000575245 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000435091 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000321300 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000573894 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
| intron-intron | ENST00000309579 | ENST00000416299 | USMG5 | chr10 | 105151997 | - | BAIAP2 | chr17 | 79009108 | - |
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FusionProtFeatures for USMG5_BAIAP2 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| USMG5 | BAIAP2 |
| Plays a critical role in maintaining the ATP synthasepopulation in mitochondria. {ECO:0000269|PubMed:21345788}. | Adapter protein that links membrane-bound small G-proteins to cytoplasmic effector proteins. Necessary for CDC42-mediated reorganization of the actin cytoskeleton and for RAC1-mediated membrane ruffling. Involved in the regulation of theactin cytoskeleton by WASF family members and the Arp2/3 complex.Plays a role in neurite growth. Acts syngeristically with ENAH topromote filipodia formation. Plays a role in the reorganization ofthe actin cytoskeleton in response to bacterial infection.Participates in actin bundling when associated with EPS8,promoting filopodial protrusions. {ECO:0000269|PubMed:11130076,ECO:0000269|PubMed:11696321, ECO:0000269|PubMed:14752106,ECO:0000269|PubMed:17115031, ECO:0000269|PubMed:19366662}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for USMG5_BAIAP2 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| * Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for USMG5_BAIAP2 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for USMG5_BAIAP2 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for USMG5_BAIAP2 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
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