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Fusion gene ID: 39818 |
FusionGeneSummary for TSPAN14_VDAC2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: TSPAN14_VDAC2 | Fusion gene ID: 39818 | Hgene | Tgene | Gene symbol | TSPAN14 | VDAC2 | Gene ID | 81619 | 7417 |
Gene name | tetraspanin 14 | voltage dependent anion channel 2 | |
Synonyms | DC-TM4F2|TM4SF14 | POR | |
Cytomap | 10q23.1 | 10q22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | tetraspanin-14tetraspanin similar to TM4SF9transmembrane 4 superfamily member 14tspan-14 | voltage-dependent anion-selective channel protein 2outer mitochondrial membrane protein porin 2 | |
Modification date | 20180523 | 20180527 | |
UniProtAcc | Q8NG11 | P45880 | |
Ensembl transtripts involved in fusion gene | ENST00000429989, ENST00000481124, ENST00000372164, ENST00000372158, ENST00000341863, ENST00000372156, ENST00000265450, | ENST00000543351, ENST00000332211, ENST00000472137, ENST00000535553, ENST00000313132, | |
Fusion gene scores | * DoF score | 8 X 6 X 5=240 | 1 X 1 X 1=1 |
# samples | 9 | 1 | |
** MAII score | log2(9/240*10)=-1.41503749927884 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: TSPAN14 [Title/Abstract] AND VDAC2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Tgene | VDAC2 | GO:0006820 | anion transport | 8420959 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | LUAD | TCGA-44-2666-01A | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000429989 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000429989 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000429989 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000429989 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000429989 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000481124 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000481124 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000481124 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000481124 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000481124 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000372164 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000372164 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372164 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372164 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372164 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000372158 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000372158 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372158 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372158 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372158 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000341863 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000341863 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000341863 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000341863 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000341863 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000372156 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
In-frame | ENST00000372156 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372156 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372156 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
5CDS-intron | ENST00000372156 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
intron-3CDS | ENST00000265450 | ENST00000543351 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
intron-3CDS | ENST00000265450 | ENST00000332211 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
intron-intron | ENST00000265450 | ENST00000472137 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
intron-intron | ENST00000265450 | ENST00000535553 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
intron-intron | ENST00000265450 | ENST00000313132 | TSPAN14 | chr10 | 82249070 | + | VDAC2 | chr10 | 76989402 | + |
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FusionProtFeatures for TSPAN14_VDAC2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
TSPAN14 | VDAC2 |
Regulates maturation and trafficking of thetransmembrane metalloprotease ADAM10 (PubMed:26668317,PubMed:23035126, PubMed:26686862). Negatively regulates ADAM10-mediated cleavage of GP6 (By similarity). Promotes ADAM10-mediatedcleavage of CDH5 (By similarity). {ECO:0000250|UniProtKB:Q8QZY6,ECO:0000269|PubMed:23035126, ECO:0000269|PubMed:26668317,ECO:0000269|PubMed:26686862}. | Forms a channel through the mitochondrial outer membranethat allows diffusion of small hydrophilic molecules. The channeladopts an open conformation at low or zero membrane potential anda closed conformation at potentials above 30-40 mV. The open statehas a weak anion selectivity whereas the closed state is cation-selective. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 1_17 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 1_17 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 1_17 | 27 | 254 | Topological domain | Cytoplasmic |
Hgene | TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 1_17 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 1_17 | 27 | 148 | Topological domain | Cytoplasmic |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 271_275 | 260 | 310 | Nucleotide binding | NAD |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 253_255 | 245 | 295 | Nucleotide binding | NAD |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 271_275 | 245 | 295 | Nucleotide binding | NAD |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 253_255 | 245 | 295 | Nucleotide binding | NAD |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 271_275 | 245 | 295 | Nucleotide binding | NAD |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 265_274 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 284_293 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 242_249 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 253_262 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 265_274 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 284_293 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 242_249 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 253_262 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 265_274 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | >VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 284_293 | 245 | 295 | Transmembrane | Beta stranded |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 254_270 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 39_61 | 27 | 271 | Topological domain | Extracellular |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 83_92 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 254_270 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 39_61 | 27 | 271 | Topological domain | Extracellular |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 83_92 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 254_270 | 27 | 254 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 39_61 | 27 | 254 | Topological domain | Extracellular |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 83_92 | 27 | 254 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 254_270 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 39_61 | 27 | 271 | Topological domain | Extracellular |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 83_92 | 27 | 271 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 254_270 | 27 | 148 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 39_61 | 27 | 148 | Topological domain | Extracellular |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 83_92 | 27 | 148 | Topological domain | Cytoplasmic |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 18_38 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 233_253 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 62_82 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372156 | + | 5 | 12 | 93_113 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 18_38 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 233_253 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 62_82 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372158 | + | 4 | 11 | 93_113 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 18_38 | 27 | 254 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 233_253 | 27 | 254 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 62_82 | 27 | 254 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000372164 | + | 2 | 8 | 93_113 | 27 | 254 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 18_38 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 233_253 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 62_82 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000429989 | + | 2 | 9 | 93_113 | 27 | 271 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 18_38 | 27 | 148 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 233_253 | 27 | 148 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 62_82 | 27 | 148 | Transmembrane | Helical |
Hgene | >TSPAN14 | chr10:82249070 | chr10:76989402 | ENST00000481124 | + | 2 | 6 | 93_113 | 27 | 148 | Transmembrane | Helical |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 253_255 | 260 | 310 | Nucleotide binding | NAD |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 106_115 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 122_131 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 134_141 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 148_156 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 161_169 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 174_186 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 189_196 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 200_209 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 213_222 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 229_238 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 242_249 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 253_262 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 37_46 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 50_58 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 65_75 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 80_87 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000313132 | + | 8 | 11 | 91_100 | 260 | 310 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 106_115 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 122_131 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 134_141 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 148_156 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 161_169 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 174_186 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 189_196 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 200_209 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 213_222 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 229_238 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 37_46 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 50_58 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 65_75 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 80_87 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000332211 | + | 7 | 10 | 91_100 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 106_115 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 122_131 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 134_141 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 148_156 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 161_169 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 174_186 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 189_196 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 200_209 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 213_222 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 229_238 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 37_46 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 50_58 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 65_75 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 80_87 | 245 | 295 | Transmembrane | Beta stranded |
Tgene | VDAC2 | chr10:82249070 | chr10:76989402 | ENST00000543351 | + | 7 | 10 | 91_100 | 245 | 295 | Transmembrane | Beta stranded |
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FusionGeneSequence for TSPAN14_VDAC2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_TSPAN14_ENST00000429989_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000429989_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000481124_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000481124_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000372164_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000372164_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000372158_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000372158_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000341863_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000341863_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000372156_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_77aa >In-frame_TSPAN14_ENST00000372156_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_77aa |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_TSPAN14_ENST00000429989_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000429989_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000481124_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000481124_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000372164_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000372164_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000372158_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000372158_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000341863_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000341863_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000372156_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC >In-frame_TSPAN14_ENST00000372156_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_231nt ATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTC AACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_TSPAN14_ENST00000429989_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_909nt CCGCACCGGGCGGCGCAGGGAAGCGGCGCCCCTTCCTCGGCAGACGGCAGGCGCCGCGCCTCCGGCCCCGCCCCTCCGCGCCCCTCCGCG CCCCGCCCCCGCCGCTCGGACGGCCCGAGTCGCGCCCTCCCGCCCCGCGCCGCGGAACTTGCTCTAACTTCCTCGGCCGAGCCGGGCCGC GCCGCCGCTGCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAA GTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCC TGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGC TTAATCCAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCC CCCAAGAAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGG TTATCTAGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAA ATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGA TCAGTGGATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAA >In-frame_TSPAN14_ENST00000429989_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_913nt CCGCACCGGGCGGCGCAGGGAAGCGGCGCCCCTTCCTCGGCAGACGGCAGGCGCCGCGCCTCCGGCCCCGCCCCTCCGCGCCCCTCCGCG CCCCGCCCCCGCCGCTCGGACGGCCCGAGTCGCGCCCTCCCGCCCCGCGCCGCGGAACTTGCTCTAACTTCCTCGGCCGAGCCGGGCCGC GCCGCCGCTGCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAA GTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCC TGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGC TTAATCCAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCC CCCAAGAAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGG TTATCTAGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAA ATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGA TCAGTGGATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAA >In-frame_TSPAN14_ENST00000481124_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_810nt CGCCGCTCGGACGGCCCGAGTCGCGCCCTCCCGCCCCGCGCCGCGGAACTTGCTCTAACTTCCTCGGCCGAGCCGGGCCGCGCCGCCGCT GCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCT TTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAA GCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGCTTAATCCAG CTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCCCCCAAGAAG ATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGGTTATCTAGT TACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAAATAGACCTT TATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGATCAGTGGAT ATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAACAAGTATAC >In-frame_TSPAN14_ENST00000481124_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_814nt CGCCGCTCGGACGGCCCGAGTCGCGCCCTCCCGCCCCGCGCCGCGGAACTTGCTCTAACTTCCTCGGCCGAGCCGGGCCGCGCCGCCGCT GCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCT TTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAA GCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGCTTAATCCAG CTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCCCCCAAGAAG ATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGGTTATCTAGT TACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAAATAGACCTT TATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGATCAGTGGAT ATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAACAAGTATAC >In-frame_TSPAN14_ENST00000372164_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_745nt GGCCGAGCCGGGCCGCGCCGCCGCTGCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGG TCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATA CTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCG CCCTGGAGTTGGAGGCTTAATCCAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAG CAGCAGGCTTTTTTCCCCCAAGAAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTA GCTGGTTTCTAGTTGGTTATCTAGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCT ACCCACCAATAATGAAATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTAC CATTGAATGAGATGGATCAGTGGATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGA >In-frame_TSPAN14_ENST00000372164_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_749nt GGCCGAGCCGGGCCGCGCCGCCGCTGCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGG TCAGCTGCTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATA CTCAGACTCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCG CCCTGGAGTTGGAGGCTTAATCCAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAG CAGCAGGCTTTTTTCCCCCAAGAAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTA GCTGGTTTCTAGTTGGTTATCTAGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCT ACCCACCAATAATGAAATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTAC CATTGAATGAGATGGATCAGTGGATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGA >In-frame_TSPAN14_ENST00000372158_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_903nt CTGCCGCCGCCGCGCGCGGGACTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGTTGCGTTACATCCTTACTATTCAAAGTGCCATCC ACAGACCTGCTGATGGGCAGCATGAGCATCACCTGGGAGCTTGCTGCGCTGTAGAATCTTGAGGGGTCTCCATCCAGATCAGCTGAATCA GAGTTTGCATTGTTAACAAGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCT CCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGT GAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGCTTAATC CAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCCCCCAAG AAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGGTTATCT AGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAAATAGAC CTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGATCAGTG GATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAACAAGTA >In-frame_TSPAN14_ENST00000372158_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_907nt CTGCCGCCGCCGCGCGCGGGACTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGTTGCGTTACATCCTTACTATTCAAAGTGCCATCC ACAGACCTGCTGATGGGCAGCATGAGCATCACCTGGGAGCTTGCTGCGCTGTAGAATCTTGAGGGGTCTCCATCCAGATCAGCTGAATCA GAGTTTGCATTGTTAACAAGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCT CCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGT GAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGCTTAATC CAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCCCCCAAG AAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGGTTATCT AGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAAATAGAC CTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGATCAGTG GATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAACAAGTA >In-frame_TSPAN14_ENST00000341863_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_720nt GCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCT TTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAA GCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGCTTAATCCAG CTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCCCCCAAGAAG ATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGGTTATCTAGT TACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAAATAGACCTT TATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGATCAGTGGAT ATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAACAAGTATAC >In-frame_TSPAN14_ENST00000341863_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_724nt GCCGCCGCCGCGCGCGGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTGCTGGTACAAGTACCTCCT TTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGACTCTGAGGCCTGGTGTGAA GCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGAGTTGGAGGCTTAATCCAG CTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGGCTTTTTTCCCCCAAGAAG ATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTTTCTAGTTGGTTATCTAGT TACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACCAATAATGAAATAGACCTT TATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAATGAGATGGATCAGTGGAT ATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTATGAATAAAACAAGTATAC >In-frame_TSPAN14_ENST00000372156_chr10_82249070_+_VDAC2_ENST00000543351_chr10_76989402_+_1188nt GGGCAGGCTGGGGTTGAAACTCTTCACCCCTTGCGGTCTGTACTGCCTCCCAACTGAGCAGCCAGGGAGAAGGCCTAGAGCCTGTGCCTT TCAGCTAGATAGCTGGAGGAACTGGCTCCTCCCTCCTTAGGCTGTGCTGGCCTGAGCTGGGAGCCTGAGAGCTGGGGCAGTTGTCTCTAA AGTGGCTTCTGGGATTCTGGTAAGAGGACTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGTTGAGACGAACTCTTGCAATGTTGCCT TGGCTGGTCTCGAACTCATCTTCTGGGTTCAAGCTGTCCGTCTGCCTCGGACTCCCAAAGTGCTAGGATTACAGCGTTACATCCTTACTA TTCAAAGTGCCATCCACAGACCTGCTGATGGGCAGCATGAGCATCACCTGGGAGCTTGCTGCGCTGTAGAATCTTGAGGGGTCTCCATCC AGATCAGCTGAATCAGAGTTTGCATTGTTAACAAGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTG CTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGAC TCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGA GTTGGAGGCTTAATCCAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGG CTTTTTTCCCCCAAGAAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTT TCTAGTTGGTTATCTAGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACC AATAATGAAATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAA TGAGATGGATCAGTGGATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTA >In-frame_TSPAN14_ENST00000372156_chr10_82249070_+_VDAC2_ENST00000332211_chr10_76989402_+_1192nt GGGCAGGCTGGGGTTGAAACTCTTCACCCCTTGCGGTCTGTACTGCCTCCCAACTGAGCAGCCAGGGAGAAGGCCTAGAGCCTGTGCCTT TCAGCTAGATAGCTGGAGGAACTGGCTCCTCCCTCCTTAGGCTGTGCTGGCCTGAGCTGGGAGCCTGAGAGCTGGGGCAGTTGTCTCTAA AGTGGCTTCTGGGATTCTGGTAAGAGGACTTGGGGTGGAGTCGAAAGCAGGGAGCCCTGTGAGTTGAGACGAACTCTTGCAATGTTGCCT TGGCTGGTCTCGAACTCATCTTCTGGGTTCAAGCTGTCCGTCTGCCTCGGACTCCCAAAGTGCTAGGATTACAGCGTTACATCCTTACTA TTCAAAGTGCCATCCACAGACCTGCTGATGGGCAGCATGAGCATCACCTGGGAGCTTGCTGCGCTGTAGAATCTTGAGGGGTCTCCATCC AGATCAGCTGAATCAGAGTTTGCATTGTTAACAAGATTCTGCTTCTCAGAAGATGCACTATTATAGATACTCTAACGCCAAGGTCAGCTG CTGGTACAAGTACCTCCTTTTCAGCTACAACATCATCTTCTGGGCAAAAGTCAACAACTCTAGCTTAATTGGAGTAGGCTATACTCAGAC TCTGAGGCCTGGTGTGAAGCTTACACTCTCTGCTCTGGTAGATGGGAAGAGCATTAATGCTGGAGGCCACAAGGTTGGGCTCGCCCTGGA GTTGGAGGCTTAATCCAGCTGAAAGAAACCTTTGGGAATGGATATCAGAAGATTTGGCCTTAATATATTTCCATTGTGACCAGCAGCAGG CTTTTTTCCCCCAAGAAGATGATCAAAACAAAGGATGATCTCAACAAGAGCTGTATTTTAAGTATTTAGACAGTTCTTTGTTAGCTGGTT TCTAGTTGGTTATCTAGTTACCAATGCTGCAGTCCTGCAGTCACCTATACATTATTTAAATGTATTTAACTGTTAAATGCGCTACCCACC AATAATGAAATAGACCTTTATGAAAACTGTGCAATTGTGTGCATGTTTGTTTTTATGTTCCTTTAGAAAACATTGACTGTTACCATTGAA TGAGATGGATCAGTGGATATTAAGATGAGGTTACAAATTTTGTTAAGTTCAGCCATTATTACTTTTGGTATCCCAGAACATGACAAATTA |
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FusionGenePPI for TSPAN14_VDAC2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
TSPAN14 | ELAVL1, ATP13A2, ADAM10, PIK3CA | VDAC2 | SERINC3, BAK1, CLN3, SNCA, CD4, MME, HDAC5, NEDD4L, CDK2, PARK2, APP, UBA52, VDAC1, RPSA, VDAC3, ATP6V1H, SFXN3, DDOST, FLOT2, MPV17, SCP2, ZFR, SUGP1, RPN1, ELAVL1, SND1, FAM162A, UBE2L3, ZNF454, HNRNPU, THOC6, SEPT11, U2AF2, SSBP1, ATP6V1F, TRAP1, UTP14A, ACAA2, ECT2, MDC1, VCAM1, FN1, ATF2, ITGA4, PHB, ADRB2, FBXO6, PHKG2, FOXRED2, EMC1, PPT1, ABCE1, ARF5, ATP5A1, ATP5B, ATP5D, ATP5I, ATP5O, ATP6V0D1, BCAP31, CISD1, CISD2, CLTC, GPX4, ILVBL, MAGT1, NDUFA12, NDUFA8, NDUFA9, NDUFV1, PHB2, RER1, SGPL1, SLC25A5, SSR3, STX12, STX7, TOMM40, TSPO, UQCRQ, ABCC1, ABCC3, ACADM, ATP1A1, ATP1A2, ATP1A3, ATP1B3, ATP5C1, ATP5F1, ATP6V1A, COX4I1, CYC1, IMMT, JAGN1, MTCH1, MTCH2, COX2, NDUFB9, NDUFS4, RAB1A, SLC25A11, TECR, TMX1, UQCRC2, VAPA, NTRK1, MED23, HERC2, RAB5C, RAB7A, MTX2, GOLT1B, TRIM33, TMEM63B, MYO19, MMGT1, FAF2, DENR, COQ2, COX15, DLST, PDHA1, SOAT1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TSPAN14_VDAC2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TSPAN14_VDAC2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | VDAC2 | C0007137 | Squamous cell carcinoma | 1 | CTD_human |
Tgene | VDAC2 | C0011881 | Diabetic Nephropathy | 1 | CTD_human |
Tgene | VDAC2 | C0014544 | Epilepsy | 1 | CTD_human |
Tgene | VDAC2 | C0026640 | Mouth Neoplasms | 1 | CTD_human |
Tgene | VDAC2 | C0029408 | Degenerative polyarthritis | 1 | CTD_human |