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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 3976

FusionGeneSummary for BCAS3_ZRANB2-AS2

check button Fusion gene summary
Fusion gene informationFusion gene name: BCAS3_ZRANB2-AS2
Fusion gene ID: 3976
HgeneTgene
Gene symbol

BCAS3

ZRANB2-AS2

Gene ID

54828

100852410

Gene nameBCAS3, microtubule associated cell migration factorZRANB2 antisense RNA 2 (head to head)
SynonymsGAOB1|MAAB-
Cytomap

17q23.2

1p31.1

Type of geneprotein-codingncRNA
Descriptionbreast carcinoma-amplified sequence 3BCAS4/BCAS3 fusionRudhirabreast carcinoma amplified sequence 4/3 fusion proteinmetastasis associated antigen of breast cancerprotein Maab1ZRANB2 antisense RNA 2 (non-protein coding)
Modification date2018052320180329
UniProtAcc

Q9H6U6

Ensembl transtripts involved in fusion geneENST00000589222, ENST00000407086, 
ENST00000390652, ENST00000408905, 
ENST00000588462, ENST00000585744, 
ENST00000588874, ENST00000585812, 
ENST00000455406, ENST00000596952, 
ENST00000415780, ENST00000608579, 
ENST00000430605, ENST00000586006, 
ENST00000587306, ENST00000587066, 
ENST00000585499, ENST00000585415, 
ENST00000590186, ENST00000591654, 
ENST00000608360, 
Fusion gene scores* DoF score40 X 23 X 15=138001 X 1 X 1=1
# samples 471
** MAII scorelog2(47/13800*10)=-4.87586369998789
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(1/1*10)=3.32192809488736
Context

PubMed: BCAS3 [Title/Abstract] AND ZRANB2-AS2 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneBCAS3

GO:0043085

positive regulation of catalytic activity

17505058

HgeneBCAS3

GO:0045944

positive regulation of transcription by RNA polymerase II

17505058

HgeneBCAS3

GO:0071391

cellular response to estrogen stimulus

17505058


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDSARCTCGA-DX-AB3A-01ABCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5CDS-intronENST00000589222ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000589222ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000589222ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000589222ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000589222ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000407086ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000407086ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000407086ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000407086ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000390652ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000390652ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000390652ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000390652ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000408905ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000408905ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000408905ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000408905ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000588462ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000588462ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-3UTRENST00000588462ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
5CDS-intronENST00000588462ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000585744ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000585744ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000585744ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585744ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000588874ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000588874ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000588874ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000588874ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000455406BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000596952BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000415780BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000608579BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000430605BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000586006BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000585812ENST00000587306BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000585812ENST00000587066BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000585499BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000585415BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-3UTRENST00000585812ENST00000590186BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000591654BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+
intron-intronENST00000585812ENST00000608360BCAS3chr17

58786686

+ZRANB2-AS2chr1

71929014

+

Top

FusionProtFeatures for BCAS3_ZRANB2-AS2


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
BCAS3

Q9H6U6

ZRANB2-AS2

Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for BCAS3_ZRANB2-AS2


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for BCAS3_ZRANB2-AS2


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
BCAS3CTBP1, CTBP2, CDC23, C16orf70, ZDHHC17, ESR1, PELP1, HIST1H3A, KAT2B, WIPI2, ATM, BAG4, CCND1, FBXW7, KRAS, PALB2, PHB, PTPN1, SMAD4, STK11, TGFB1, TSG101, XRCC3, OFD1, CEP128, FBF1, NPHP1, SCLT1, XPO1, CD14, HDAC1, IRF3, MAGEE1, IL17RA, DOCK5, VWA5A, RAB2BZRANB2-AS2


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for BCAS3_ZRANB2-AS2


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for BCAS3_ZRANB2-AS2


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource