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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 3941

FusionGeneSummary for BCAS3_BCAS3

check button Fusion gene summary
Fusion gene informationFusion gene name: BCAS3_BCAS3
Fusion gene ID: 3941
HgeneTgene
Gene symbol

BCAS3

BCAS3

Gene ID

54828

54828

Gene nameBCAS3, microtubule associated cell migration factorBCAS3, microtubule associated cell migration factor
SynonymsGAOB1|MAABGAOB1|MAAB
Cytomap

17q23.2

17q23.2

Type of geneprotein-codingprotein-coding
Descriptionbreast carcinoma-amplified sequence 3BCAS4/BCAS3 fusionRudhirabreast carcinoma amplified sequence 4/3 fusion proteinmetastasis associated antigen of breast cancerprotein Maab1breast carcinoma-amplified sequence 3BCAS4/BCAS3 fusionRudhirabreast carcinoma amplified sequence 4/3 fusion proteinmetastasis associated antigen of breast cancerprotein Maab1
Modification date2018052320180523
UniProtAcc

Q9H6U6

Q9H6U6

Ensembl transtripts involved in fusion geneENST00000589222, ENST00000407086, 
ENST00000390652, ENST00000408905, 
ENST00000588462, ENST00000585744, 
ENST00000588874, ENST00000585812, 
ENST00000589222, ENST00000407086, 
ENST00000390652, ENST00000408905, 
ENST00000588462, ENST00000585744, 
ENST00000588874, ENST00000585812, 
Fusion gene scores* DoF score40 X 23 X 15=1380026 X 15 X 15=5850
# samples 4741
** MAII scorelog2(47/13800*10)=-4.87586369998789
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(41/5850*10)=-3.83474080985268
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: BCAS3 [Title/Abstract] AND BCAS3 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneBCAS3

GO:0043085

positive regulation of catalytic activity

17505058

HgeneBCAS3

GO:0045944

positive regulation of transcription by RNA polymerase II

17505058

HgeneBCAS3

GO:0071391

cellular response to estrogen stimulus

17505058

TgeneBCAS3

GO:0043085

positive regulation of catalytic activity

17505058

TgeneBCAS3

GO:0045944

positive regulation of transcription by RNA polymerase II

17505058

TgeneBCAS3

GO:0071391

cellular response to estrogen stimulus

17505058


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
ChiTaRS3.1DN915906BCAS3chr17

59293039

-BCAS3chr17

59299626

-
ChiTaRS3.1DN919080BCAS3chr17

59293039

-BCAS3chr17

59299626

-
ChiTaRS3.1CV572932BCAS3chr17

59378187

+BCAS3chr17

59371368

+
ChiTaRS3.1DN918887BCAS3chr17

59293039

-BCAS3chr17

59299626

-
ChiTaRS3.1DN920098BCAS3chr17

59293039

-BCAS3chr17

59299626

-
ChiTaRS3.1DN917358BCAS3chr17

59293039

-BCAS3chr17

59299626

-
ChiTaRS3.1DN920239BCAS3chr17

59293039

-BCAS3chr17

59299626

-
ChiTaRS3.1DN917633BCAS3chr17

59293039

-BCAS3chr17

59299626

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
intron-intronENST00000589222ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000407086ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000390652ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000408905ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588462ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585744ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000588874ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000589222BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000407086BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000390652BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000408905BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000588462BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000585744BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000588874BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000585812ENST00000585812BCAS3chr17

59293039

-BCAS3chr17

59299626

-
intron-intronENST00000589222ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000589222ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000407086ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000390652ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000408905ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588462ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585744ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000588874ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000589222BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000407086BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000390652BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000408905BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000588462BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000585744BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000588874BCAS3chr17

59378187

+BCAS3chr17

59371368

+
intron-intronENST00000585812ENST00000585812BCAS3chr17

59378187

+BCAS3chr17

59371368

+

Top

FusionProtFeatures for BCAS3_BCAS3


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
BCAS3

Q9H6U6

BCAS3

Q9H6U6


check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


Top

FusionGeneSequence for BCAS3_BCAS3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

Top

FusionGenePPI for BCAS3_BCAS3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


Top

RelatedDrugs for BCAS3_BCAS3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for BCAS3_BCAS3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource