|
Fusion gene ID: 37606 |
FusionGeneSummary for TCF7L2_PTPRC |
Fusion gene summary |
Fusion gene information | Fusion gene name: TCF7L2_PTPRC | Fusion gene ID: 37606 | Hgene | Tgene | Gene symbol | TCF7L2 | PTPRC | Gene ID | 6934 | 5788 |
Gene name | transcription factor 7 like 2 | protein tyrosine phosphatase, receptor type C | |
Synonyms | TCF-4|TCF4 | B220|CD45|CD45R|GP180|L-CA|LCA|LY5|T200 | |
Cytomap | 10q25.2-q25.3 | 1q31.3-q32.1 | |
Type of gene | protein-coding | protein-coding | |
Description | transcription factor 7-like 2HMG box transcription factor 4T-cell factor 4T-cell-specific transcription factor 4hTCF-4transcription factor 7-like 2 (T-cell specific, HMG-box) | receptor-type tyrosine-protein phosphatase CCD45 antigenT200 glycoproteinT200 leukocyte common antigenprotein tyrosine phosphatase, receptor type, c polypeptide | |
Modification date | 20180527 | 20180522 | |
UniProtAcc | Q9NQB0 | P08575 | |
Ensembl transtripts involved in fusion gene | ENST00000534894, ENST00000536810, ENST00000545257, ENST00000355995, ENST00000543371, ENST00000355717, ENST00000538897, ENST00000349937, ENST00000369397, ENST00000352065, ENST00000369395, ENST00000542695, ENST00000369389, ENST00000369386, ENST00000466338, | ENST00000352140, ENST00000594404, ENST00000367376, ENST00000442510, ENST00000348564, ENST00000598951, ENST00000367364, ENST00000413409, ENST00000391970, | |
Fusion gene scores | * DoF score | 9 X 7 X 10=630 | 4 X 4 X 2=32 |
# samples | 15 | 5 | |
** MAII score | log2(15/630*10)=-2.0703893278914 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/32*10)=0.643856189774725 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
Context | PubMed: TCF7L2 [Title/Abstract] AND PTPRC [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | TCF7L2 | GO:0000122 | negative regulation of transcription by RNA polymerase II | 12799378 |
Hgene | TCF7L2 | GO:0006357 | regulation of transcription by RNA polymerase II | 9727977 |
Hgene | TCF7L2 | GO:0032092 | positive regulation of protein binding | 12799378 |
Hgene | TCF7L2 | GO:0032350 | regulation of hormone metabolic process | 15525634 |
Hgene | TCF7L2 | GO:0042593 | glucose homeostasis | 15525634 |
Hgene | TCF7L2 | GO:0043433 | negative regulation of DNA binding transcription factor activity | 12799378 |
Hgene | TCF7L2 | GO:0045444 | fat cell differentiation | 10937998 |
Hgene | TCF7L2 | GO:0045892 | negative regulation of transcription, DNA-templated | 12799378|15525634 |
Hgene | TCF7L2 | GO:0045944 | positive regulation of transcription by RNA polymerase II | 9065401|19168596 |
Hgene | TCF7L2 | GO:0048625 | myoblast fate commitment | 10937998 |
Tgene | PTPRC | GO:0006469 | negative regulation of protein kinase activity | 9197241 |
Tgene | PTPRC | GO:0050852 | T cell receptor signaling pathway | 10358156 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
ChiTaRS3.1 | BF910208 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - | ||
ChiTaRS3.1 | BF910138 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-intron | ENST00000534894 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000534894 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000536810 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000545257 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355995 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000543371 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000355717 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000538897 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000349937 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369397 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000352065 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369395 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000542695 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369389 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000369386 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000352140 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000594404 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000367376 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000442510 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000348564 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000598951 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000367364 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000413409 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
intron-intron | ENST00000466338 | ENST00000391970 | TCF7L2 | chr10 | 114823655 | - | PTPRC | chr1 | 198665721 | - |
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FusionProtFeatures for TCF7L2_PTPRC |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
TCF7L2 | PTPRC |
Protein tyrosine-protein phosphatase required for T-cellactivation through the antigen receptor. Acts as a positiveregulator of T-cell coactivation upon binding to DPP4. The firstPTPase domain has enzymatic activity, while the second one seemsto affect the substrate specificity of the first one. Upon T-cellactivation, recruits and dephosphorylates SKAP1 and FYN.Dephosphorylates LYN, and thereby modulates LYN activity (Bysimilarity). {ECO:0000250, ECO:0000269|PubMed:11909961,ECO:0000269|PubMed:2845400}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for TCF7L2_PTPRC |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
* Fusion transcript sequences (only coding sequence (CDS) region). |
* Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for TCF7L2_PTPRC |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for TCF7L2_PTPRC |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for TCF7L2_PTPRC |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | TCF7L2 | C0036341 | Schizophrenia | 4 | PSYGENET |
Hgene | TCF7L2 | C0009404 | Colorectal Neoplasms | 2 | CTD_human |
Hgene | TCF7L2 | C0011860 | Diabetes Mellitus, Non-Insulin-Dependent | 2 | CTD_human |
Hgene | TCF7L2 | C0001418 | Adenocarcinoma | 1 | CTD_human |
Hgene | TCF7L2 | C0005586 | Bipolar Disorder | 1 | PSYGENET |
Hgene | TCF7L2 | C0009375 | Colonic Neoplasms | 1 | CTD_human |
Hgene | TCF7L2 | C0020507 | Hyperplasia | 1 | CTD_human |
Hgene | TCF7L2 | C0036337 | Schizoaffective Disorder | 1 | PSYGENET |
Hgene | TCF7L2 | C3495559 | Juvenile arthritis | 1 | CTD_human |
Tgene | PTPRC | C0003873 | Rheumatoid Arthritis | 2 | CTD_human |
Tgene | PTPRC | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
Tgene | PTPRC | C0033975 | Psychotic Disorders | 1 | PSYGENET |
Tgene | PTPRC | C0035309 | Retinal Diseases | 1 | CTD_human |
Tgene | PTPRC | C0349204 | Nonorganic psychosis | 1 | PSYGENET |