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Fusion gene ID: 36609 |
FusionGeneSummary for STRN_SULT6B1 |
Fusion gene summary |
Fusion gene information | Fusion gene name: STRN_SULT6B1 | Fusion gene ID: 36609 | Hgene | Tgene | Gene symbol | STRN | SULT6B1 | Gene ID | 6801 | 391365 |
Gene name | striatin | sulfotransferase family 6B member 1 | |
Synonyms | PPP2R6A|SG2NA|STRN1 | - | |
Cytomap | 2p22.2 | 2p22.2 | |
Type of gene | protein-coding | protein-coding | |
Description | striatinprotein phosphatase 2 regulatory subunit B'''alphastriatin, calmodulin binding protein | sulfotransferase 6B1ST6B1sulfotransferase SULT6B1sulfotransferase family, cytosolic, 6B, member 1thyroxine sulfotransferase | |
Modification date | 20180523 | 20180403 | |
UniProtAcc | O43815 | Q6IMI4 | |
Ensembl transtripts involved in fusion gene | ENST00000263918, ENST00000379213, | ENST00000260637, ENST00000379149, ENST00000535679, ENST00000407963, | |
Fusion gene scores | * DoF score | 5 X 6 X 7=210 | 1 X 1 X 1=1 |
# samples | 8 | 1 | |
** MAII score | log2(8/210*10)=-1.39231742277876 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: STRN [Title/Abstract] AND SULT6B1 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | LIHC | TCGA-NI-A4U2-01A | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000263918 | ENST00000260637 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
In-frame | ENST00000263918 | ENST00000379149 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
In-frame | ENST00000263918 | ENST00000535679 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
5CDS-5UTR | ENST00000263918 | ENST00000407963 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
In-frame | ENST00000379213 | ENST00000260637 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
In-frame | ENST00000379213 | ENST00000379149 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
In-frame | ENST00000379213 | ENST00000535679 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
5CDS-5UTR | ENST00000379213 | ENST00000407963 | STRN | chr2 | 37126666 | - | SULT6B1 | chr2 | 37415690 | - |
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FusionProtFeatures for STRN_SULT6B1 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
STRN | SULT6B1 |
Calmodulin-binding protein which may function asscaffolding or signaling protein and may play a role in dendriticCa(2+) signaling. | Sulfotransferase that utilizes 3'-phospho-5'-adenylylsulfate (PAPS) as sulfonate donor to catalyze the sulfateconjugation of thyroxine. Involved in the metabolism of thyroxine(By similarity). {ECO:0000250}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 53_120 | 265 | 781 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 53_120 | 253 | 732 | Coiled coil | Ontology_term=ECO:0000255 |
Hgene | STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 149_166 | 265 | 781 | Region | Calmodulin-binding |
Hgene | STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 55_63 | 265 | 781 | Region | Caveolin-binding |
Hgene | STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 149_166 | 253 | 732 | Region | Calmodulin-binding |
Hgene | STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 55_63 | 253 | 732 | Region | Caveolin-binding |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000260637 | - | -1 | 7 | 237_242 | 28 | 266 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000260637 | - | -1 | 7 | 259_261 | 28 | 266 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000260637 | - | -1 | 7 | 65_70 | 28 | 266 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000379149 | - | 0 | 4 | 237_242 | 0 | 200 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000379149 | - | 0 | 4 | 259_261 | 0 | 200 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000379149 | - | 0 | 4 | 65_70 | 0 | 200 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000407963 | - | 0 | 8 | 237_242 | -7 | 266 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000407963 | - | 0 | 8 | 259_261 | -7 | 266 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000407963 | - | 0 | 8 | 65_70 | -7 | 266 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000535679 | - | 0 | 7 | 237_242 | 0 | 304 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000535679 | - | 0 | 7 | 259_261 | 0 | 304 | Nucleotide binding | PAPS |
Tgene | >SULT6B1 | chr2:37126666 | chr2:37415690 | ENST00000535679 | - | 0 | 7 | 65_70 | 0 | 304 | Nucleotide binding | PAPS |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 461_500 | 265 | 781 | Repeat | Note=WD 1 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 514_553 | 265 | 781 | Repeat | Note=WD 2 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 567_606 | 265 | 781 | Repeat | Note=WD 3 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 662_701 | 265 | 781 | Repeat | Note=WD 4 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 704_743 | 265 | 781 | Repeat | Note=WD 5 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000263918 | - | 6 | 18 | 750_779 | 265 | 781 | Repeat | Note=WD 6 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 461_500 | 253 | 732 | Repeat | Note=WD 1 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 514_553 | 253 | 732 | Repeat | Note=WD 2 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 567_606 | 253 | 732 | Repeat | Note=WD 3 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 662_701 | 253 | 732 | Repeat | Note=WD 4 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 704_743 | 253 | 732 | Repeat | Note=WD 5 |
Hgene | >STRN | chr2:37126666 | chr2:37415690 | ENST00000379213 | - | 7 | 18 | 750_779 | 253 | 732 | Repeat | Note=WD 6 |
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FusionGeneSequence for STRN_SULT6B1 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000260637_chr2_37415690_-_265aa MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKG QENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKS >In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000379149_chr2_37415690_-_265aa MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKG QENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKS >In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000535679_chr2_37415690_-_265aa MDEQAGPGVFFSNNHPGAGGAKGLGPLAEAAAAGDGAAAAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKG QENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKS >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000260637_chr2_37415690_-_253aa MDEQAGPGVFFSNNHPGAGGAKGLGPLAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRI KMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSKRVRALLGFSSD >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000379149_chr2_37415690_-_253aa MDEQAGPGVFFSNNHPGAGGAKGLGPLAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRI KMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSKRVRALLGFSSD >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000535679_chr2_37415690_-_253aa MDEQAGPGVFFSNNHPGAGGAKGLGPLAGAARAQYSLPGILHFLQHEWARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRI KMLEYALKQERAKYHKLKYGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWKQGRQLLRQYLQEVGYTDTILDVKSKRVRALLGFSSD |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000260637_chr2_37415690_-_795nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGAGGCT GCCGCGGCCGGCGACGGGGCGGCTGCGGCGGGGGCGGCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGG GCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGC CAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAA TACGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAAC AGCCAGTTAATGTGGAAACAAGGTCGACAACTACTCAGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCT AAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGATGTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAG GCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCTGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCA >In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000379149_chr2_37415690_-_795nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGAGGCT GCCGCGGCCGGCGACGGGGCGGCTGCGGCGGGGGCGGCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGG GCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGC CAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAA TACGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAAC AGCCAGTTAATGTGGAAACAAGGTCGACAACTACTCAGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCT AAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGATGTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAG GCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCTGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCA >In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000535679_chr2_37415690_-_795nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGAGGCT GCCGCGGCCGGCGACGGGGCGGCTGCGGCGGGGGCGGCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGG GCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGC CAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAA TACGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAAC AGCCAGTTAATGTGGAAACAAGGTCGACAACTACTCAGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCT AAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGATGTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAG GCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCTGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCA >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000260637_chr2_37415690_-_759nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGGGGCG GCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTG GAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATC AAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCT CCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTC AGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGAT GTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCT GAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGAT >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000379149_chr2_37415690_-_759nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGGGGCG GCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTG GAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATC AAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCT CCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTC AGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGAT GTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCT GAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGAT >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000535679_chr2_37415690_-_759nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGGGGCG GCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTG GAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATC AAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCT CCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTC AGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGAT GTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCT GAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGAT |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000260637_chr2_37415690_-_1738nt GCGGCCGCCATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTG GCGGAGGCTGCCGCGGCCGGCGACGGGGCGGCTGCGGCGGGGGCGGCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAG CACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAA AGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCAC AAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCA CAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTCAGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGAT GTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGATGTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAAT GGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCTGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTT GAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGATGTTGATGGAAGAGAGAAAAGCGTCATTGATACTTCAACAGGGATT CCTTACCCCATCACCATGTGCACCTCAGAAACTTTCCAAGCGCTGGACACCTTCGAAGCCAGACATGATGACATCGTGCTAGCATCTTAT CCAAAGTGCGGTTCAAACTGGATTCTCCACATTGTCAGTGAATTAATATATGCTGTTTCTAAAAAAAAGTATAAATATCCAGAATTCCCA GTTCTTGAATGTGGGGATTCAGAAAAATATCAGAGAATGAAAGGCTTTCCATCACCAAGGATTTTGGCAACTCACCTCCACTATGACAAA TTACCTGGGTCTATCTTCGAGAATAAAGCCAAGATATTGGTGATATTTCGAAACCCTAAAGATACAGCAGTATCTTTTTTGCATTTCCAC AACGATGTCCCCGATATTCCAAGCTATGGCTCTTGGGATGAATTCTTCAGACAGTTCATGAAAGGACAAGTTTCTTGGGGAAGGTATTTT GATTTTGCAATCAATTGGAACAAACATCTTGATGGCGACAATGTTAAGTTCATATTATATGAAGACCTGAAAGAGAATCTGGCTGCTGGA ATAAAACAGATTGCTGAGTTCTTGGGATTCTTTCTAACTGGGGAGCAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCCATGCGT GCGAAGTCTCAGGACACACACGGTGCTGTCGGCCCATTCCTTTTCCGCAAAGGTGAAGTTGGTGATTGGAAAAATTTGTTCAGTGAAATT CAGAACCAGGAAATGGATGAAAAATTCAAAGAGTGCTTAGCAGGCACCTCCCTCGGAGCAAAGTTGAAGTATGAATCATATTGCCAGGGT TGATTCCAGTCAATTCAGCAGGCCTAGATTTATTTTCCTTAATAATAATTAAGTGTAAATAATTAAATGATAATTCAATCAAATAATCAA >In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000379149_chr2_37415690_-_1519nt GCGGCCGCCATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTG GCGGAGGCTGCCGCGGCCGGCGACGGGGCGGCTGCGGCGGGGGCGGCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAG CACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAA AGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCAC AAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCA CAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTCAGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGAT GTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGATGTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAAT GGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCTGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTT GAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGATGTTGATGGAAGAGAGAAAAGCGTCATTGATACTTCAACAATGGCT GATAAATCCAAATTTATTGAATACATTGACGAAGCTTTAGAAAAATCAAAAGAAACTGCACTCTCTCATTTATTTTTCACCTATCAGGGG ATTCCTTACCCCATCACCATGTGCACCTCAGAAACTTTCCAAGCGCTGGACACCTTCGAAGCCAGACATGATGACATCGTGCTAGCATCT TATCCAAAGTGCGGTTCAAACTGGATTCTCCACATTGTCAGTGAATTAATATATGCTGTTTCTAAAAAAAAGTATAAATATCCAGAATTC CCAGTTCTTGAATGTGGGGATTCAGAAAAATATCAGAATCTGGCTGCTGGAATAAAACAGATTGCTGAGTTCTTGGGATTCTTTCTAACT GGGGAGCAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCCATGCGTGCGAAGTCTCAGGACACACACGGTGCTGTCGGCCCATTC CTTTTCCGCAAAGGTGAAGTTGGTGATTGGAAAAATTTGTTCAGTGAAATTCAGAACCAGGAAATGGATGAAAAATTCAAAGAGTGCTTA GCAGGCACCTCCCTCGGAGCAAAGTTGAAGTATGAATCATATTGCCAGGGTTGATTCCAGTCAATTCAGCAGGCCTAGATTTATTTTCCT >In-frame_STRN_ENST00000263918_chr2_37126666_-_SULT6B1_ENST00000535679_chr2_37415690_-_1831nt GCGGCCGCCATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTG GCGGAGGCTGCCGCGGCCGGCGACGGGGCGGCTGCGGCGGGGGCGGCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAG CACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTGGAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAA AGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATCAAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCAC AAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCTCCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCA CAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTCAGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGAT GTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGATGTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAAT GGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCTGAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTT GAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGATGTTGATGGAAGAGAGAAAAGCGTCATTGATACTTCAACAATGGCT GATAAATCCAAATTTATTGAATACATTGACGAAGCTTTAGAAAAATCAAAAGAAACTGCACTCTCTCATTTATTTTTCACCTATCAGGGG ATTCCTTACCCCATCACCATGTGCACCTCAGAAACTTTCCAAGCGCTGGACACCTTCGAAGCCAGACATGATGACATCGTGCTAGCATCT TATCCAAAGTGCGGTTCAAACTGGATTCTCCACATTGTCAGTGAATTAATATATGCTGTTTCTAAAAAAAAGTATAAATATCCAGAATTC CCAGTTCTTGAATGTGGGGATTCAGAAAAATATCAGAGAATGAAAGGCTTTCCATCACCAAGGATTTTGGCAACTCACCTCCACTATGAC AAATTACCTGGGTCTATCTTCGAGAATAAAGCCAAGATATTGGTGATATTTCGAAACCCTAAAGATACAGCAGTATCTTTTTTGCATTTC CACAACGATGTCCCCGATATTCCAAGCTATGGCTCTTGGGATGAATTCTTCAGACAGTTCATGAAAGGACAAGTTTCTTGGGGAAGGTAT TTTGATTTTGCAATCAATTGGAACAAACATCTTGATGGCGACAATGTTAAGTTCATATTATATGAAGACCTGAAAGAGAATCTGGCTGCT GGAATAAAACAGATTGCTGAGTTCTTGGGATTCTTTCTAACTGGGGAGCAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCCATG CGTGCGAAGTCTCAGGACACACACGGTGCTGTCGGCCCATTCCTTTTCCGCAAAGGTGAAGTTGGTGATTGGAAAAATTTGTTCAGTGAA ATTCAGAACCAGGAAATGGATGAAAAATTCAAAGAGTGCTTAGCAGGCACCTCCCTCGGAGCAAAGTTGAAGTATGAATCATATTGCCAG GGTTGATTCCAGTCAATTCAGCAGGCCTAGATTTATTTTCCTTAATAATAATTAAGTGTAAATAATTAAATGATAATTCAATCAAATAAT >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000260637_chr2_37415690_-_1693nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGGGGCG GCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTG GAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATC AAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCT CCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTC AGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGAT GTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCT GAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGAT GTTGATGGAAGAGAGAAAAGCGTCATTGATACTTCAACAGGGATTCCTTACCCCATCACCATGTGCACCTCAGAAACTTTCCAAGCGCTG GACACCTTCGAAGCCAGACATGATGACATCGTGCTAGCATCTTATCCAAAGTGCGGTTCAAACTGGATTCTCCACATTGTCAGTGAATTA ATATATGCTGTTTCTAAAAAAAAGTATAAATATCCAGAATTCCCAGTTCTTGAATGTGGGGATTCAGAAAAATATCAGAGAATGAAAGGC TTTCCATCACCAAGGATTTTGGCAACTCACCTCCACTATGACAAATTACCTGGGTCTATCTTCGAGAATAAAGCCAAGATATTGGTGATA TTTCGAAACCCTAAAGATACAGCAGTATCTTTTTTGCATTTCCACAACGATGTCCCCGATATTCCAAGCTATGGCTCTTGGGATGAATTC TTCAGACAGTTCATGAAAGGACAAGTTTCTTGGGGAAGGTATTTTGATTTTGCAATCAATTGGAACAAACATCTTGATGGCGACAATGTT AAGTTCATATTATATGAAGACCTGAAAGAGAATCTGGCTGCTGGAATAAAACAGATTGCTGAGTTCTTGGGATTCTTTCTAACTGGGGAG CAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCCATGCGTGCGAAGTCTCAGGACACACACGGTGCTGTCGGCCCATTCCTTTTC CGCAAAGGTGAAGTTGGTGATTGGAAAAATTTGTTCAGTGAAATTCAGAACCAGGAAATGGATGAAAAATTCAAAGAGTGCTTAGCAGGC ACCTCCCTCGGAGCAAAGTTGAAGTATGAATCATATTGCCAGGGTTGATTCCAGTCAATTCAGCAGGCCTAGATTTATTTTCCTTAATAA >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000379149_chr2_37415690_-_1474nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGGGGCG GCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTG GAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATC AAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCT CCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTC AGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGAT GTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCT GAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGAT GTTGATGGAAGAGAGAAAAGCGTCATTGATACTTCAACAATGGCTGATAAATCCAAATTTATTGAATACATTGACGAAGCTTTAGAAAAA TCAAAAGAAACTGCACTCTCTCATTTATTTTTCACCTATCAGGGGATTCCTTACCCCATCACCATGTGCACCTCAGAAACTTTCCAAGCG CTGGACACCTTCGAAGCCAGACATGATGACATCGTGCTAGCATCTTATCCAAAGTGCGGTTCAAACTGGATTCTCCACATTGTCAGTGAA TTAATATATGCTGTTTCTAAAAAAAAGTATAAATATCCAGAATTCCCAGTTCTTGAATGTGGGGATTCAGAAAAATATCAGAATCTGGCT GCTGGAATAAAACAGATTGCTGAGTTCTTGGGATTCTTTCTAACTGGGGAGCAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCC ATGCGTGCGAAGTCTCAGGACACACACGGTGCTGTCGGCCCATTCCTTTTCCGCAAAGGTGAAGTTGGTGATTGGAAAAATTTGTTCAGT GAAATTCAGAACCAGGAAATGGATGAAAAATTCAAAGAGTGCTTAGCAGGCACCTCCCTCGGAGCAAAGTTGAAGTATGAATCATATTGC CAGGGTTGATTCCAGTCAATTCAGCAGGCCTAGATTTATTTTCCTTAATAATAATTAAGTGTAAATAATTAAATGATAATTCAATCAAAT >In-frame_STRN_ENST00000379213_chr2_37126666_-_SULT6B1_ENST00000535679_chr2_37415690_-_1786nt ATGGACGAGCAGGCGGGTCCCGGCGTCTTCTTCAGCAACAACCACCCGGGCGCCGGCGGTGCCAAGGGGCTCGGGCCTCTGGCGGGGGCG GCCCGAGCCCAGTACAGTCTCCCGGGGATCCTGCACTTCCTGCAGCACGAGTGGGCCCGCTTCGAGGTGGAGAGAGCCCAGTGGGAGGTG GAGCGGGCGGAGCTGCAGGCCCAGATTGCCTTCCTGCAGGGAGAAAGGAAGGGCCAAGAAAATTTGAAGAAGGATCTTGTGAGGAGGATC AAAATGTTGGAGTATGCTCTTAAACAGGAAAGAGCCAAATACCACAAGTTGAAATACGGGACAGAATTGAATCAGGGAGATATGAAGCCT CCAAGCTATGATTCTGATGAAGGTAATGAAACAGAAGTGCAGCCACAACAAAACAGCCAGTTAATGTGGAAACAAGGTCGACAACTACTC AGACAGTATCTACAGGAGGTGGGTTATACAGATACTATTCTAGATGTGAAATCTAAACGAGTGCGAGCTTTGTTGGGCTTTTCAAGTGAT GTCACGGACAGGGAAGATGACAAAAATCAGGACTCAGTTGTAAATGGCACAGAGGCTGAAGTTAAAGAGACAGCAATGATTGCAAAATCT GAGTTAACAGATTCTGCCTCCGTGCTGGATAATTTCAAATTCCTTGAAAGTGCAGCTGCAGATTTCAGTGATGAAGATGAAGATGATGAT GTTGATGGAAGAGAGAAAAGCGTCATTGATACTTCAACAATGGCTGATAAATCCAAATTTATTGAATACATTGACGAAGCTTTAGAAAAA TCAAAAGAAACTGCACTCTCTCATTTATTTTTCACCTATCAGGGGATTCCTTACCCCATCACCATGTGCACCTCAGAAACTTTCCAAGCG CTGGACACCTTCGAAGCCAGACATGATGACATCGTGCTAGCATCTTATCCAAAGTGCGGTTCAAACTGGATTCTCCACATTGTCAGTGAA TTAATATATGCTGTTTCTAAAAAAAAGTATAAATATCCAGAATTCCCAGTTCTTGAATGTGGGGATTCAGAAAAATATCAGAGAATGAAA GGCTTTCCATCACCAAGGATTTTGGCAACTCACCTCCACTATGACAAATTACCTGGGTCTATCTTCGAGAATAAAGCCAAGATATTGGTG ATATTTCGAAACCCTAAAGATACAGCAGTATCTTTTTTGCATTTCCACAACGATGTCCCCGATATTCCAAGCTATGGCTCTTGGGATGAA TTCTTCAGACAGTTCATGAAAGGACAAGTTTCTTGGGGAAGGTATTTTGATTTTGCAATCAATTGGAACAAACATCTTGATGGCGACAAT GTTAAGTTCATATTATATGAAGACCTGAAAGAGAATCTGGCTGCTGGAATAAAACAGATTGCTGAGTTCTTGGGATTCTTTCTAACTGGG GAGCAAATTCAAACTATCTCAGTCCAGAGCACCTTCCAAGCCATGCGTGCGAAGTCTCAGGACACACACGGTGCTGTCGGCCCATTCCTT TTCCGCAAAGGTGAAGTTGGTGATTGGAAAAATTTGTTCAGTGAAATTCAGAACCAGGAAATGGATGAAAAATTCAAAGAGTGCTTAGCA GGCACCTCCCTCGGAGCAAAGTTGAAGTATGAATCATATTGCCAGGGTTGATTCCAGTCAATTCAGCAGGCCTAGATTTATTTTCCTTAA 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FusionGenePPI for STRN_SULT6B1 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
STRN | STK24, MCC, CTTNBP2, CTTNBP2NL, STRIP1, MOB4, PDCD10, PPP2CA, PPP2R1A, STK26, SIKE1, STK25, STRN3, PPP2R1B, STRN4, STRIP2, SLMAP, CCT2, CCT8, CCT3, TCP1, CCT5, FGFR1OP2, CCT6A, CCT7, CCT4, CCT6B, TRAF3IP3, PPP2CB, ZRANB1, ELAVL1, LNX1, APC, TJP1, DDX1, DYNC1H1, CPSF6, EIF2S1, SF3B5, BRCA1, ECT2, PAXIP1, STK3, STK4, TFIP11, RINT1, PCOLCE2, LYPD3, NR1H3, PPP2R2C, RASSF3, PGAM5, NTRK1, HSPB1, DYNLL1, MAP4K4, EEF1E1, BAG2, SLC43A3, AHNAK, PRDM14, TNFRSF1A, NHSL2, PSMC5, PLP1, ZNF550, SNX24, LRRCC1, ZNF331, PRPF19, SPINK2, EXOC1, PKN3, NCKAP5L, TFPT, CCHCR1, YEATS4, TUFT1, RABGAP1L, GOLGA5 | SULT6B1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for STRN_SULT6B1 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for STRN_SULT6B1 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |