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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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Fusion gene ID: 36533

FusionGeneSummary for STK3_COX6C

check button Fusion gene summary
Fusion gene informationFusion gene name: STK3_COX6C
Fusion gene ID: 36533
HgeneTgene
Gene symbol

STK3

COX6C

Gene ID

8428

1345

Gene nameserine/threonine kinase 24cytochrome c oxidase subunit 6C
SynonymsHEL-S-95|MST3|MST3B|STE20|STK3-
Cytomap

13q32.2

8q22.2

Type of geneprotein-codingprotein-coding
Descriptionserine/threonine-protein kinase 24STE20-like kinase 3STE20-like kinase MST3epididymis secretory protein Li 95mammalian STE20-like protein kinase 3serine/threonine kinase 24 (STE20 homolog, yeast)sterile 20-like kinase 3cytochrome c oxidase subunit 6Ccytochrome c oxidase polypeptide VIccytochrome c oxidase subunit VIc preprotein
Modification date2018052320180522
UniProtAcc

Q13188

P09669

Ensembl transtripts involved in fusion geneENST00000419617, ENST00000523601, 
ENST00000521768, 
ENST00000520468, 
ENST00000297564, ENST00000520271, 
ENST00000517682, ENST00000524245, 
ENST00000522940, ENST00000518171, 
ENST00000523016, 
Fusion gene scores* DoF score15 X 8 X 8=9604 X 3 X 4=48
# samples 135
** MAII scorelog2(13/960*10)=-2.88452278258006
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(5/48*10)=0.0588936890535686
effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs).
DoF>8 and MAII>0
Context

PubMed: STK3 [Title/Abstract] AND COX6C [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneSTK3

GO:0006468

protein phosphorylation

19604147

HgeneSTK3

GO:0042542

response to hydrogen peroxide

22291017

HgeneSTK3

GO:0046777

protein autophosphorylation

17046825|17657516


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVESCATCGA-L5-A4OT-01ASTK3chr8

99718695

-COX6Cchr8

100899846

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000419617ENST00000520468STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000297564STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000520271STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000517682STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000524245STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000522940STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000419617ENST00000518171STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000419617ENST00000523016STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000520468STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000297564STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000520271STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000517682STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000524245STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000522940STK3chr8

99718695

-COX6Cchr8

100899846

-
Frame-shiftENST00000523601ENST00000518171STK3chr8

99718695

-COX6Cchr8

100899846

-
In-frameENST00000523601ENST00000523016STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000520468STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000297564STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000520271STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000517682STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000524245STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000522940STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000518171STK3chr8

99718695

-COX6Cchr8

100899846

-
intron-3CDSENST00000521768ENST00000523016STK3chr8

99718695

-COX6Cchr8

100899846

-

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FusionProtFeatures for STK3_COX6C


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
STK3

Q13188

COX6C

P09669

Stress-activated, pro-apoptotic kinase which, followingcaspase-cleavage, enters the nucleus and induces chromatincondensation followed by internucleosomal DNA fragmentation. Keycomponent of the Hippo signaling pathway which plays a pivotalrole in organ size control and tumor suppression by restrictingproliferation and promoting apoptosis. The core of this pathway iscomposed of a kinase cascade wherein STK3/MST2 and STK4/MST1, incomplex with its regulatory protein SAV1, phosphorylates andactivates LATS1/2 in complex with its regulatory protein MOB1,which in turn phosphorylates and inactivates YAP1 oncoprotein andWWTR1/TAZ. Phosphorylation of YAP1 by LATS2 inhibits itstranslocation into the nucleus to regulate cellular genesimportant for cell proliferation, cell death, and cell migration.STK3/MST2 and STK4/MST1 are required to repress proliferation ofmature hepatocytes, to prevent activation of facultative adultliver stem cells (oval cells), and to inhibit tumor formation.Phosphorylates NKX2-1 (By similarity). Phosphorylates NEK2 andplays a role in centrosome disjunction by regulating thelocalization of NEK2 to centrosome, and its ability tophosphorylate CROCC and CEP250. In conjunction with SAV1,activates the transcriptional activity of ESR1 through themodulation of its phosphorylation. Positively regulates RAF1activation via suppression of the inhibitory phosphorylation ofRAF1 on 'Ser-259'. Phosphorylates MOBKL1A and RASSF2.Phosphorylates MOBKL1B on 'Thr-74'. Acts cooperatively withMOBKL1B to activate STK38. {ECO:0000250|UniProtKB:Q9JI10,ECO:0000269|PubMed:15688006, ECO:0000269|PubMed:16930133,ECO:0000269|PubMed:18328708, ECO:0000269|PubMed:18362890,ECO:0000269|PubMed:19525978, ECO:0000269|PubMed:20212043,ECO:0000269|PubMed:21076410, ECO:0000269|PubMed:21104395,ECO:0000269|PubMed:28087714, ECO:0000269|PubMed:8566796,ECO:0000269|PubMed:8816758}. This protein is one of the nuclear-coded polypeptidechains of cytochrome c oxidase, the terminal oxidase inmitochondrial electron transport.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-61133_41228492Nucleotide bindingATP
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000297564-1455_753896Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000517682-1455_753897Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000518171-1455_7538181Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520271-1455_753849Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520468-1455_753862Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000522940-1455_75387Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000523016-1355_753876Topological domainMitochondrial intermembrane
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000524245-1455_753868Topological domainMitochondrial intermembrane

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611287_328228492Coiled coilOntology_term=ECO:0000255
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611442_475228492Coiled coilOntology_term=ECO:0000255
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611308_314228492Compositional biasNote=Poly-Glu
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611370_375228492Compositional biasNote=Poly-Glu
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-61127_278228492DomainProtein kinase
HgeneSTK3chr8:99718695chr8:100899846ENST00000419617-611437_484228492DomainSARAH
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000297564-141_133896Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000517682-141_133897Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000518171-141_1338181Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520271-141_133849Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520468-141_133862Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000522940-141_13387Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000523016-131_133876Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000524245-141_133868Topological domainMitochondrial matrix
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000297564-1414_543896TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000517682-1414_543897TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000518171-1414_5438181TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520271-1414_543849TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000520468-1414_543862TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000522940-1414_54387TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000523016-1314_543876TransmembraneHelical
TgeneCOX6Cchr8:99718695chr8:100899846ENST00000524245-1414_543868TransmembraneHelical


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FusionGeneSequence for STK3_COX6C


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000520468_chr8_100899846_-_266aa
MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYF
KNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000520271_chr8_100899846_-_266aa
MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYF
KNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000524245_chr8_100899846_-_266aa
MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYF
KNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000522940_chr8_100899846_-_266aa
MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYF
KNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000518171_chr8_100899846_-_266aa
MEQPPAPKSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDLQEIIKEISIMQQCDSPYVVKYYGSYF
KNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNT

>In-frame_STK3_ENST00000523601_chr8_99718695_-_COX6C_ENST00000523016_chr8_100899846_-_294aa
MLQLMDSGITICLRNGAASVFKKKEWSTQGEENKQDSKLKKLSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVES
DLQEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLIEDEIATILKSTLKGLEYLHFMRKIHRDIKAGNI
LLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITSIEMAEGKPPYADIHPMRFRVADQRKKAYADF


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000520468_chr8_100899846_-_798nt
ATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAGCTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTA
GAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTT
GAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTT
AAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAA
GATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGA
AATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACT
GTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACT
TCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCA

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000520271_chr8_100899846_-_798nt
ATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAGCTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTA
GAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTT
GAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTT
AAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAA
GATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGA
AATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACT
GTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACT
TCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCA

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000524245_chr8_100899846_-_798nt
ATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAGCTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTA
GAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTT
GAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTT
AAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAA
GATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGA
AATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACT
GTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACT
TCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCA

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000522940_chr8_100899846_-_798nt
ATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAGCTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTA
GAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTT
GAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTT
AAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAA
GATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGA
AATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACT
GTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACT
TCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCA

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000518171_chr8_100899846_-_798nt
ATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAGCTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTA
GAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTT
GAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTT
AAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAA
GATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGA
AATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACT
GTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACT
TCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCA

>In-frame_STK3_ENST00000523601_chr8_99718695_-_COX6C_ENST00000523016_chr8_100899846_-_882nt
ATGTTACAACTCATGGACAGTGGCATTACCATCTGCCTTAGGAACGGAGCAGCCTCTGTCTTCAAGAAAAAAGAATGGAGCACACAAGGA
GAAGAAAACAAGCAAGACAGTAAACTAAAAAAGCTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAG
CTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCA
GATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAAT
ACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAA
ATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATT
CTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATA
GGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATA
GAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTC


* Fusion transcript sequences (Full-length transcript).
>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000520468_chr8_100899846_-_1354nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC
TGACTTGTGTTCCTGAACTATGACACATGAATATGTGGGCTAAGAAATAGTTCCTCTTGATAAATAAACAATTAACAAATACTTTGGACA
GTAAGTCTTTCTCAGTTCTTAATGATAATGCAGGGCACTTACTAGCATAAGAATTGGTTTGGGATTTAACTGTTTATGAAGCTAACTTGA
TTTCCGTGTTTTGTTAAAATTTCATTGTTCTAGCACATCTTTAACTGTGATAGTTTGTCCGTTTCATTGCAGTTACTTGGTCTTGGGCTA
TGGATTAAAAAGTGTTCTTCATGAGCCTGTAAGACTACTGTACTGTGGGCTCTAAGAAGAGATAGAATCCTAATAAAATCTATCCTTGGC

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000520271_chr8_100899846_-_1071nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000524245_chr8_100899846_-_1070nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000522940_chr8_100899846_-_1069nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGAATTTCTTCAGGTTGAATTACCTAGAAGTTTGTCAC

>In-frame_STK3_ENST00000419617_chr8_99718695_-_COX6C_ENST00000518171_chr8_100899846_-_1345nt
CCGCGGAGTTACGGGAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTGGTGCCCTAGGCTCGGCCGGCCGGTGCCCCGGCTCCTTTCC
TCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAAGAGTAAACTAAAAAAG
CTGAGTGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAA
GCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATA
ATGCAGCAATGTGACAGCCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGC
GCTGGCTCTGTCTCAGACATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGA
CTAGAATATTTGCACTTTATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCA
GATTTTGGAGTGGCTGGTCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATT
CAAGAAATAGGCTATAACTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGAT
ATACATCCAATGAGGTTTCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAG
GAGATGAGGAAGGCTGGTATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGGGTCTCCCTCTGTCACCCAGGCCGTAGTGCTGTAGT
GCGATCATGGCTCACTGCAGCCTCAACCTCCCAGGCTCAAGGGATCTTCCTGCCTCAGCCTCCCAAGAAGCTGGCACTATAGGCATGTGC
CACCACACCTGGCTAACTTCTTTATTTTTAGTAGAGACAGGGTTTCACCATATTACCTGGGCTGTGCTTGAATTCCTGGGCTCAGGCGAT
CCGTCCACCTTGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGCCACTGTGCCTGGCATAATTTTGGTATTTTTTGATAGTAGCCATCC

>In-frame_STK3_ENST00000523601_chr8_99718695_-_COX6C_ENST00000523016_chr8_100899846_-_1726nt
GTGCAGAACCGTTTGGTTTTCCCGAGGGGTAGGCAGAATTTCCAACCCCACGAGCTGCTCCCTCTTTCCGCAAACCTCCTAACCCCGGGG
TTTTTCCATAAATGTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTAC
GGTCTCTTGAAAAGATTTGGAATTGACCATGTAGATAATCTCTGAGAGCAGTTCTTAAAGTGTAATCCAGAACCGGTGGAACTTGCTAGA
AACGCATATTCTTCGGACCCCCTCCAAATCTGCTGAATCTGAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAGGAATTTGGAAAAAGG
ATGGAGAGATCTCTCTGAGCTAGACTCTTCAGTGGAGGAAATGTTACAACTCATGGACAGTGGCATTACCATCTGCCTTAGGAACGGAGC
AGCCTCTGTCTTCAAGAAAAAAGAATGGAGCACACAAGGAGAAGAAAACAAGCAAGACAGTAAACTAAAAAAGCTGAGTGAAGACAGTTT
GACTAAGCAGCCTGAAGAAGTTTTTGATGTATTAGAGAAGCTTGGAGAAGGGTCTTATGGAAGTGTATTTAAAGCAATACACAAGGAATC
CGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGATCTTCAGGAAATAATCAAAGAAATTTCCATAATGCAGCAATGTGACAG
CCCATATGTTGTAAAGTACTATGGCAGTTATTTTAAGAATACAGACCTCTGGATTGTTATGGAGTACTGTGGCGCTGGCTCTGTCTCAGA
CATAATTAGATTACGAAACAAGACATTAATAGAAGATGAAATTGCAACCATTCTTAAATCTACATTGAAAGGACTAGAATATTTGCACTT
TATGAGAAAAATACACAGAGATATAAAAGCTGGAAATATTCTCCTCAATACAGAAGGACATGCAAAATTGGCAGATTTTGGAGTGGCTGG
TCAGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAA
CTGTGTGGCCGACATCTGGTCCCTTGGCATTACTTCTATAGAAATGGCTGAAGGAAAACCTCCTTATGCTGATATACATCCAATGAGGTT
TCGTGTGGCTGATCAAAGAAAGAAGGCATACGCAGATTTCTACAGAAACTACGATGTCATGAAAGATTTTGAGGAGATGAGGAAGGCTGG
TATCTTTCAGAGTGTAAAGTAATCTTGGAATATAAAGGTAATATGGTTATTTGAAGTTACTTAAAAAAAAATTTCTAATTGTGGTAAAAT
GCAAATACAGGTGACTGTCCCTCACAATGTTTAGACTTAAGATTTTTTGACTTTACGATGGTGTGGAAGTGATACACATTTGGTAGAAAC
CATACTTTGAATTTTGATCTTTGTCCACATGAGCAATAAGTGGCACAATACTTTTGTGATGTGGGGGAGCACCAATGACCACATCCCCCA
GTCAGAAACATAATCACAAGGGTAAACAGCTGATGCTGTACTCTGTAGTGTTGTGTGAGATACTCAGTGTTTTATTATAAGCTAGGCTTT
GTGTTAGATGATTTTCTTCAGCTGTAGGCTAACATAAGTGTTCTGAGCACATTTAAGGTAGGGAAGGCTAAGCTATGATGTAAGTTAGGT


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FusionGenePPI for STK3_COX6C


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
STK3CNKSR1, MAP1LC3A, MAP1LC3B, RASSF5, STK4, SAV1, ATG4B, PLK1, CACYBP, RASSF2, FREM1, KHSRP, DDAH2, PHAX, QARS, MPP1, GBP2, LATS1, RASSF6, MOB4, NRD1, MOB1A, RASSF1, RAF1, MBP, MOB1B, LATS2, PTPN14, LRRK2, EIF4EBP1, TAZ, STK3, AKT1, ORM2, CPNE1, PEX19, ZC3H7A, HSPE1, SULT2A1, SLMAP, CTTNBP2NL, RASSF3, AURKB, ERLIN2, STRIP1, FGFR1OP2, KIF2C, MAP1S, PRKRIR, RAE1, RASSF4, RUNDC3B, STRN, STRN3, STRN4, TSPYL1, YWHAB, CSNK1E, NEB, MAP1B, CDK3, DST, ACACA, VAPA, FBXW11, GAD1, TRAF1, TFPT, GMCL1, FAM9B, BTRC, ADCYAP1, MRPL40, NSUN5, IFI16, FGFR1OP, CEP128, XPO1, C21orf59, CENPO, CASP3, MTMR7, KIF2B, ZNF133, VAPB, ZIM2, ZNF420, ZNF695, SKP2, KIF3B, CDK1COX6CNELFCD, PTN, RCHY1, PHB, NDUFA12, CAPZA2, CRK, RAB2A, VAPA, C15orf48, NDUFA4, NDUFS3, COQ9, APOOL, CHCHD10, CHCHD2, COX6B1, OCIAD1, CISD3, COQ2, RAC1, CALM1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for STK3_COX6C


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
TgeneCOX6CP09669DB02659Cholic AcidCytochrome c oxidase subunit 6Csmall moleculeapproved

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RelatedDiseases for STK3_COX6C


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource