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Fusion gene ID: 36285 |
FusionGeneSummary for ST8SIA1_AEBP2 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ST8SIA1_AEBP2 | Fusion gene ID: 36285 | Hgene | Tgene | Gene symbol | ST8SIA1 | AEBP2 | Gene ID | 6489 | 121536 |
Gene name | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 | AE binding protein 2 | |
Synonyms | GD3S|SIAT8|SIAT8-A|SIAT8A|ST8SiaI | - | |
Cytomap | 12p12.1 | 12p12.3 | |
Type of gene | protein-coding | protein-coding | |
Description | alpha-N-acetylneuraminide alpha-2,8-sialyltransferaseST8 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase 1alpha-2,8-sialyltransferase 8Adisialoganglioside (GD3) synthaseganglioside GD3 synthaseganglioside GT3 synthaseganglioside-specific alpha | zinc finger protein AEBP2AE(adipocyte enhancer)-binding protein 2adipocyte enhancer-binding protein 2 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | Q92185 | Q6ZN18 | |
Ensembl transtripts involved in fusion gene | ENST00000396037, ENST00000539510, ENST00000536558, ENST00000404299, ENST00000381424, | ENST00000541908, ENST00000398864, ENST00000266508, ENST00000360995, | |
Fusion gene scores | * DoF score | 5 X 3 X 5=75 | 8 X 7 X 5=280 |
# samples | 5 | 8 | |
** MAII score | log2(5/75*10)=-0.584962500721156 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(8/280*10)=-1.8073549220576 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
Context | PubMed: ST8SIA1 [Title/Abstract] AND AEBP2 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | SKCM | TCGA-ER-A193-06A | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
Frame-shift | ENST00000396037 | ENST00000541908 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
Frame-shift | ENST00000396037 | ENST00000398864 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
Frame-shift | ENST00000396037 | ENST00000266508 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
Frame-shift | ENST00000396037 | ENST00000360995 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
In-frame | ENST00000539510 | ENST00000541908 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
In-frame | ENST00000539510 | ENST00000398864 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
In-frame | ENST00000539510 | ENST00000266508 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
In-frame | ENST00000539510 | ENST00000360995 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000536558 | ENST00000541908 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000536558 | ENST00000398864 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000536558 | ENST00000266508 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000536558 | ENST00000360995 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000404299 | ENST00000541908 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000404299 | ENST00000398864 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000404299 | ENST00000266508 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000404299 | ENST00000360995 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000381424 | ENST00000541908 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000381424 | ENST00000398864 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000381424 | ENST00000266508 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
intron-3CDS | ENST00000381424 | ENST00000360995 | ST8SIA1 | chr12 | 22401940 | - | AEBP2 | chr12 | 19665332 | + |
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FusionProtFeatures for ST8SIA1_AEBP2 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ST8SIA1 | AEBP2 |
Involved in the production of gangliosides GD3 and GT3from GM3; gangliosides are a subfamily of complexglycosphinglolipds that contain one or more residues of sialicacid. {ECO:0000269|PubMed:7937974, ECO:0000269|PubMed:8058740,ECO:0000269|PubMed:8195250, ECO:0000269|PubMed:8631981}. | DNA-binding transcriptional repressor. May interact withand stimulate the activity of the PRC2 complex, which methylates'Lys-9' and 'Lys-27' residues of histone H3.{ECO:0000269|PubMed:15225548}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for ST8SIA1_AEBP2 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000541908_chr12_19665332_+_71aa >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000398864_chr12_19665332_+_85aa >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000266508_chr12_19665332_+_71aa >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000360995_chr12_19665332_+_85aa |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000541908_chr12_19665332_+_213nt GTAATAGCTAAGAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAAT GAAAGTGAACGACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATAC >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000398864_chr12_19665332_+_255nt GTAATAGCTAAGAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAAT GAAAGTGAACGACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATAC >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000266508_chr12_19665332_+_213nt GTAATAGCTAAGAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAAT GAAAGTGAACGACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATAC >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000360995_chr12_19665332_+_255nt GTAATAGCTAAGAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAAT GAAAGTGAACGACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATAC |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000541908_chr12_19665332_+_727nt CAGAGGGGCCATGGCTGTACTGGCGTGGAAGTTCCCGCGGACCCGGCTGCCCATGGGAGCCAGTGCCCTCTGTGTCGTGGTCCTCTGTTG GCTCTACATCTTCCCCGTCTACCGGCTGCCCAACGAGAAAGAGATCGTGCAGGGGGTGCTGCAACAGGGCACGGCGTGGAGGAGGAACCA GACCGCGGCCAGAGCGTTCAGGAAACAAATGGAAGACTGCTGCGACCCTGCCCATCTCTTTGCTATGACTAAAATGAATTCCCCTATGGG GAAGAGCATGTGGTATGACGGGGAGTTTTTATACTCATTCACCATTGACAATTCAACTTACTCTCTCTTCCCACAGATGCAATCTCCCTC CTTTGTCAAGTGAATACACTAAGGATGTTGGATCCAAAAGTCAGTTAGTGACAGCTAATCCCAGCATAATTCGGCAAAGGTAATAGCTAA GAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACG ACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATACAGAACAATGCC GCAGAAGAGGTTGAAGAGGTAAAAAATAAATAAATACATAAAAAGCAAACAAGCGGGGACACCTGCAGTCTTAGTCACTGACAATGGGTT >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000398864_chr12_19665332_+_1349nt CAGAGGGGCCATGGCTGTACTGGCGTGGAAGTTCCCGCGGACCCGGCTGCCCATGGGAGCCAGTGCCCTCTGTGTCGTGGTCCTCTGTTG GCTCTACATCTTCCCCGTCTACCGGCTGCCCAACGAGAAAGAGATCGTGCAGGGGGTGCTGCAACAGGGCACGGCGTGGAGGAGGAACCA GACCGCGGCCAGAGCGTTCAGGAAACAAATGGAAGACTGCTGCGACCCTGCCCATCTCTTTGCTATGACTAAAATGAATTCCCCTATGGG GAAGAGCATGTGGTATGACGGGGAGTTTTTATACTCATTCACCATTGACAATTCAACTTACTCTCTCTTCCCACAGATGCAATCTCCCTC CTTTGTCAAGTGAATACACTAAGGATGTTGGATCCAAAAGTCAGTTAGTGACAGCTAATCCCAGCATAATTCGGCAAAGGTAATAGCTAA GAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACG ACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATACAGAACAATGCC GCAGAAGAGGTTGAAGAGAACTCTGATAAGAAAAGTGTTCAATTTGTATTTAAGCAAACAGTGAACGACGTTTGCAATCAACTAAAAATT CGTCTATCGAATTAGGGCTGAAAATTACTGTTAAAGAGTGTTGCAGTATGTCTGGTGGCTCCCTTTTCAGGACTAGGGCTTTCTCATGGA GTACAGTATGTTAATATTTACCTATATAACTAATCTGTTAACGGTTTTTGAAAAACCTTTCAAATTATTTGAATAATCTTCATATTTTCA TTTAACCTATATGACTCTAATTTTTTTTCTGAGGAAATCATTTGGTTTTTGAGTTGTTTTTTCTTAATGTAAGAAAAATTGTATTTTTTT TACAAGTATCTTCAAACTGAATCTTTTATGCACCAAAGTTGGTCTTGAAAAGGAAAATAAAATCACTTTCTTGCTTGGTAAGCAAGAAGC CATATCGATTTTTTTTAACTTACAGAAATGGAAATATGTGTAACTTGTTAGTATTGTATTAAACAAATGTTGCATAGAGATAATAGAACA TTGCTTGTAAATAATTCAGCAGATTTGTAATATATTTTTATATTTTGAAATGTACTGTAGATGTTTTCTAGAGGCATGAAAGTTAAATGT >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000266508_chr12_19665332_+_2759nt CAGAGGGGCCATGGCTGTACTGGCGTGGAAGTTCCCGCGGACCCGGCTGCCCATGGGAGCCAGTGCCCTCTGTGTCGTGGTCCTCTGTTG GCTCTACATCTTCCCCGTCTACCGGCTGCCCAACGAGAAAGAGATCGTGCAGGGGGTGCTGCAACAGGGCACGGCGTGGAGGAGGAACCA GACCGCGGCCAGAGCGTTCAGGAAACAAATGGAAGACTGCTGCGACCCTGCCCATCTCTTTGCTATGACTAAAATGAATTCCCCTATGGG GAAGAGCATGTGGTATGACGGGGAGTTTTTATACTCATTCACCATTGACAATTCAACTTACTCTCTCTTCCCACAGATGCAATCTCCCTC CTTTGTCAAGTGAATACACTAAGGATGTTGGATCCAAAAGTCAGTTAGTGACAGCTAATCCCAGCATAATTCGGCAAAGGTAATAGCTAA GAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACG ACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATACAGAACAATGCC GCAGAAGAGGTTGAAGAGGTAAAAAATAAATAAATACATAAAAAGCAAACAAGCGGGGACACCTGCAGTCTTAGTCACTGACAATGGGTT TAGGGAAAGTTGCACATTAGAGTCAACCCCTTCTTTTTTTTTTTTTTTTTTTTAAATCCAGTATTTAGGATAATATTTATGCTTAGTGTA AACATTCTGTGAATGAAGTAGACTCTTCGGTGGAATATATTAATATATTACTGTATATCCACATTTTCATGGAATGGTACTGTGGGAGAC TGAGCAAACACTCTTTTGGCAACTTAGTAGAACAGCTTCTTAAAGGCTTTGCATGCTTGCTGCTTTAAGCTGCTTTTTTTTTTCTTTTCT TCCCTTTAGTGATTTCAGTAGTTTATATTGGAAAGAAAAACAATTACAACATGTGCCCTTACAAATACCAAAAGCACTGTAAGGATATTT GTCTTGACAGTGTTTATTGATTTGAAGTCATATTAGGAAATATTTAGACAATGAAAATTATCAAGAGATAATTTACCTTTCAATTATGAT AAATAGATGTGATTGGTTGCCATTTGTGTTCTTTTGCAGAACTCTGATAAGAAAAGTGTTCAATTTGTATTTAAGCAAACAGTGAACGAC GTTTGCAATCAACTAAAAATTCGTCTATCGAATTAGGGCTGAAAATTACTGTTAAAGAGTGTTGCAGTATGTCTGGTGGCTCCCTTTTCA GGACTAGGGCTTTCTCATGGAGTACAGTATGTTAATATTTACCTATATAACTAATCTGTTAACGGTTTTTGAAAAACCTTTCAAATTATT TGAATAATCTTCATATTTTCATTTAACCTATATGACTCTAATTTTTTTTCTGAGGAAATCATTTGGTTTTTGAGTTGTTTTTTCTTAATG TAAGAAAAATTGTATTTTTTTTACAAGTATCTTCAAACTGAATCTTTTATGCACCAAAGTTGGTCTTGAAAAGGAAAATAAAATCACTTT CTTGCTTGGTAAGCAAGAAGCCATATCGATTTTTTTTAACTTACAGAAATGGAAATATGTGTAACTTGTTAGTATTGTATTAAACAAATG TTGCATAGAGATAATAGAACATTGCTTGTAAATAATTCAGCAGATTTGTAATATATTTTTATATTTTGAAATGTACTGTAGATGTTTTCT AGAGGCATGAAAGTTAAATGTATATATTATGGTAGAAATAATATTGAAGGATATTGTACTTCACTAGTGCTGCCAGAGGAATTGTTAATA AAAGCACCTTCTTTAACAATAAATGTCTTTCACAGACTTAAGGGACTATGTACTACTGTTAATATCTCTAAGAACAAAACACATTGAACA TCCTTCCAGAAAGTCTTTGAGGGAGGACCTATACCCATAATAGAATTATGGCACTCATTTCTGACAGTGATCAAGAAATCAGTTATTTCC TTACTGTTGGAAGGACATTGTAAAGTATGTGGTTATATGCAGTGAAACTGCAGAAAATACTCCTGGTTGAGGAGTTTTCACTTTACTACA GTGATATAAAAACCAGCAGTTTTTACACTAAATTTTTTAAAGAAATATTAGACAAAAATATAGAATTAAAACCTTTGGTTCCAAAATGGG AAAGGTTCCACGATACATAAATCATTTCTCATTTGCTTTAAAAAATTTAAAAGTGTAAAAATTATGAGAGACTTTATTCGTTAACAATGG GGGTAAAGAGCTATATACATGAAAATGAGTCTTATAAAATTAAGTGAAGTGCAAATAAAAGCACTGCTACTATAAGACATTCTGGAATGG TTGTTTAATAAGGGTATTATCCATTTGATCTATAGCAATGTGATTTTATTTTTAAAAAGAAAAGCAGTGTGTTTTCTTTTTTTGTTGTTT TCTTTTGCTTAAGCACTTCATCAATTGCTTTATTCTGTATCTGCGAAGTAATCTGCAATCTCTTTTGTTCTTTTTAAAATTTGATTTGTT ATAAAATTGCCAAATAGAAGTGTTTCAGATACATAGTTTGTACCTGTATTTTTATTTTATTGCCTCATGTTCTTGTAAGTCATTCTTAAT >In-frame_ST8SIA1_ENST00000539510_chr12_22401940_-_AEBP2_ENST00000360995_chr12_19665332_+_2197nt CAGAGGGGCCATGGCTGTACTGGCGTGGAAGTTCCCGCGGACCCGGCTGCCCATGGGAGCCAGTGCCCTCTGTGTCGTGGTCCTCTGTTG GCTCTACATCTTCCCCGTCTACCGGCTGCCCAACGAGAAAGAGATCGTGCAGGGGGTGCTGCAACAGGGCACGGCGTGGAGGAGGAACCA GACCGCGGCCAGAGCGTTCAGGAAACAAATGGAAGACTGCTGCGACCCTGCCCATCTCTTTGCTATGACTAAAATGAATTCCCCTATGGG GAAGAGCATGTGGTATGACGGGGAGTTTTTATACTCATTCACCATTGACAATTCAACTTACTCTCTCTTCCCACAGATGCAATCTCCCTC CTTTGTCAAGTGAATACACTAAGGATGTTGGATCCAAAAGTCAGTTAGTGACAGCTAATCCCAGCATAATTCGGCAAAGGTAATAGCTAA GAGAAAAGAAGATTCTGGGAAGATCAAACTTTTGCTTCATTGGATGCCTGAAGACATTCTGCCTGATGTGTGGGTGAATGAAAGTGAACG ACATCAGTTAAAAACTAAAGTAGTTCATTTATCAAAGCTACCCAAAGATACTGCCTTGCTTTTGGACCCAAACATATACAGAACAATGCC GCAGAAGAGGTTGAAGAGAACTCTGATAAGAAAAGTGTTCAATTTGTATTTAAGCAAACAGTGAACGACGTTTGCAATCAACTAAAAATT CGTCTATCGAATTAGGGCTGAAAATTACTGTTAAAGAGTGTTGCAGTATGTCTGGTGGCTCCCTTTTCAGGACTAGGGCTTTCTCATGGA GTACAGTATGTTAATATTTACCTATATAACTAATCTGTTAACGGTTTTTGAAAAACCTTTCAAATTATTTGAATAATCTTCATATTTTCA TTTAACCTATATGACTCTAATTTTTTTTCTGAGGAAATCATTTGGTTTTTGAGTTGTTTTTTCTTAATGTAAGAAAAATTGTATTTTTTT TACAAGTATCTTCAAACTGAATCTTTTATGCACCAAAGTTGGTCTTGAAAAGGAAAATAAAATCACTTTCTTGCTTGGTAAGCAAGAAGC CATATCGATTTTTTTTAACTTACAGAAATGGAAATATGTGTAACTTGTTAGTATTGTATTAAACAAATGTTGCATAGAGATAATAGAACA TTGCTTGTAAATAATTCAGCAGATTTGTAATATATTTTTATATTTTGAAATGTACTGTAGATGTTTTCTAGAGGCATGAAAGTTAAATGT ATATATTATGGTAGAAATAATATTGAAGGATATTGTACTTCACTAGTGCTGCCAGAGGAATTGTTAATAAAAGCACCTTCTTTAACAATA AATGTCTTTCACAGACTTAAGGGACTATGTACTACTGTTAATATCTCTAAGAACAAAACACATTGAACATCCTTCCAGAAAGTCTTTGAG GGAGGACCTATACCCATAATAGAATTATGGCACTCATTTCTGACAGTGATCAAGAAATCAGTTATTTCCTTACTGTTGGAAGGACATTGT AAAGTATGTGGTTATATGCAGTGAAACTGCAGAAAATACTCCTGGTTGAGGAGTTTTCACTTTACTACAGTGATATAAAAACCAGCAGTT TTTACACTAAATTTTTTAAAGAAATATTAGACAAAAATATAGAATTAAAACCTTTGGTTCCAAAATGGGAAAGGTTCCACGATACATAAA TCATTTCTCATTTGCTTTAAAAAATTTAAAAGTGTAAAAATTATGAGAGACTTTATTCGTTAACAATGGGGGTAAAGAGCTATATACATG AAAATGAGTCTTATAAAATTAAGTGAAGTGCAAATAAAAGCACTGCTACTATAAGACATTCTGGAATGGTTGTTTAATAAGGGTATTATC CATTTGATCTATAGCAATGTGATTTTATTTTTAAAAAGAAAAGCAGTGTGTTTTCTTTTTTTGTTGTTTTCTTTTGCTTAAGCACTTCAT CAATTGCTTTATTCTGTATCTGCGAAGTAATCTGCAATCTCTTTTGTTCTTTTTAAAATTTGATTTGTTATAAAATTGCCAAATAGAAGT GTTTCAGATACATAGTTTGTACCTGTATTTTTATTTTATTGCCTCATGTTCTTGTAAGTCATTCTTAATTGACCAATGATTGTAGACCTT |
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FusionGenePPI for ST8SIA1_AEBP2 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ST8SIA1 | POTEF, RPIA, BRAT1, INTS12, NMD3, IPO13, HOOK2, INTS1, RUFY1, ZMYM2 | AEBP2 | LDOC1, RALYL, EED, SUZ12, RBBP4, HIST1H1A, HIST1H1C, SETD8, ELAVL1, APP, JMJD6, FBXW11, HMBOX1, JARID2, EZH2, RBBP7, ATXN3, KBTBD7, BTRC, THAP1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ST8SIA1_AEBP2 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ST8SIA1_AEBP2 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ST8SIA1 | C0023895 | Liver diseases | 1 | CTD_human |
Hgene | ST8SIA1 | C0235032 | Neurotoxicity Syndromes | 1 | CTD_human |