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Fusion gene ID: 35638 |
FusionGeneSummary for SPECC1_TMEM11 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SPECC1_TMEM11 | Fusion gene ID: 35638 | Hgene | Tgene | Gene symbol | SPECC1 | TMEM11 | Gene ID | 92521 | 8834 |
Gene name | sperm antigen with calponin homology and coiled-coil domains 1 | transmembrane protein 11 | |
Synonyms | CYTSB|HCMOGT-1|HCMOGT1|NSP | C17orf35|PM1|PMI | |
Cytomap | 17p11.2 | 17p11.2 | |
Type of gene | protein-coding | protein-coding | |
Description | cytospin-BNSP5cytokinesis and spindle organization Bnuclear structure protein 5sperm antigen HCMOGT-1sperm antigen with calponin-like and coiled coil domains 1structure protein NSP5a3astructure protein NSP5a3bstructure protein NSP5b3astructure pr | transmembrane protein 11, mitochondrialputative receptor protein | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q5M775 | P17152 | |
Ensembl transtripts involved in fusion gene | ENST00000472876, ENST00000395527, ENST00000395529, ENST00000261503, ENST00000395530, ENST00000536879, ENST00000395522, ENST00000395525, ENST00000584527, | ENST00000317635, ENST00000584432, | |
Fusion gene scores | * DoF score | 6 X 6 X 3=108 | 2 X 1 X 1=2 |
# samples | 6 | 2 | |
** MAII score | log2(6/108*10)=-0.84799690655495 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(2/2*10)=3.32192809488736 | |
Context | PubMed: SPECC1 [Title/Abstract] AND TMEM11 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | LD | BRCA | TCGA-A2-A0EY-01A | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
intron-3CDS | ENST00000472876 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-5UTR | ENST00000472876 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-3CDS | ENST00000395527 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-5UTR | ENST00000395527 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-3CDS | ENST00000395529 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-5UTR | ENST00000395529 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-3CDS | ENST00000261503 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-5UTR | ENST00000261503 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
In-frame | ENST00000395530 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
5CDS-5UTR | ENST00000395530 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
5UTR-3CDS | ENST00000536879 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
5UTR-5UTR | ENST00000536879 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
In-frame | ENST00000395522 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
5CDS-5UTR | ENST00000395522 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
In-frame | ENST00000395525 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
5CDS-5UTR | ENST00000395525 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-3CDS | ENST00000584527 | ENST00000317635 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
intron-5UTR | ENST00000584527 | ENST00000584432 | SPECC1 | chr17 | 20059549 | + | TMEM11 | chr17 | 21102153 | - |
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FusionProtFeatures for SPECC1_TMEM11 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
SPECC1 | TMEM11 |
Plays a role in mitochondrial morphogenesis.{ECO:0000269|PubMed:21274005}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for SPECC1_TMEM11 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SPECC1_ENST00000395530_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_185aa MGNHSGRPEDPEPGXACRPQTATLCMRSTMGRMPKTSLSTSWSRPWKPSTSTLXLSPLALATRQPAGSPWATACTRRPCWRAPPASSPRW RCPXIIPTTFPCPLVCXAWPAAPSMGSPGSLTLAASTKWSTTPINCRACLCTHSPPPPRWCWSGRTTCTERDCTTRXHWPPWCTVXRRFT >In-frame_SPECC1_ENST00000395522_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_185aa MGNHSGRPEDPEPGXACRPQTATLCMRSTMGRMPKTSLSTSWSRPWKPSTSTLXLSPLALATRQPAGSPWATACTRRPCWRAPPASSPRW RCPXIIPTTFPCPLVCXAWPAAPSMGSPGSLTLAASTKWSTTPINCRACLCTHSPPPPRWCWSGRTTCTERDCTTRXHWPPWCTVXRRFT >In-frame_SPECC1_ENST00000395525_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_185aa MGNHSGRPEDPEPGXACRPQTATLCMRSTMGRMPKTSLSTSWSRPWKPSTSTLXLSPLALATRQPAGSPWATACTRRPCWRAPPASSPRW RCPXIIPTTFPCPLVCXAWPAAPSMGSPGSLTLAASTKWSTTPINCRACLCTHSPPPPRWCWSGRTTCTERDCTTRXHWPPWCTVXRRFT |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SPECC1_ENST00000395530_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_557nt ATGGGCAACCACTCAGGACGGCCCGAGGATCCGGAACCAGGGTGAGCTTGTCGGCCACAGACTGCTACATTGTGCATGAGATCTACAATG GGGAGAATGCCCAAGACCAGTTTGAGTACGAGCTGGAGCAGGCCCTGGAAGCCCAGTACAAGTACATTGTGATTGAGCCCACTCGCATTG GCGACGAGACAGCCCGCTGGATCACCGTGGGCAACTGCCTGCACAAGACGGCCGTGCTGGCGGGCACCGCCTGCCTCTTCACCCCGTTGG CGCTGCCCTTAGATTATTCCCACTACATTTCCCTGCCCGCTGGTGTGCTGAGCCTGGCCTGCTGCACCCTCTATGGGATCTCCTGGCAGT TTGACCCTTGCTGCAAGTACCAAGTGGAGTACGACGCCTATAAACTGTCGCGCCTGCCTCTGCACACACTCACCTCCTCCACCCCGGTGG TGCTGGTCCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACGATAGCACTGGCCGCCCTGGTGTACTGTGTAAAGAAGATTTACG >In-frame_SPECC1_ENST00000395522_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_557nt ATGGGCAACCACTCAGGACGGCCCGAGGATCCGGAACCAGGGTGAGCTTGTCGGCCACAGACTGCTACATTGTGCATGAGATCTACAATG GGGAGAATGCCCAAGACCAGTTTGAGTACGAGCTGGAGCAGGCCCTGGAAGCCCAGTACAAGTACATTGTGATTGAGCCCACTCGCATTG GCGACGAGACAGCCCGCTGGATCACCGTGGGCAACTGCCTGCACAAGACGGCCGTGCTGGCGGGCACCGCCTGCCTCTTCACCCCGTTGG CGCTGCCCTTAGATTATTCCCACTACATTTCCCTGCCCGCTGGTGTGCTGAGCCTGGCCTGCTGCACCCTCTATGGGATCTCCTGGCAGT TTGACCCTTGCTGCAAGTACCAAGTGGAGTACGACGCCTATAAACTGTCGCGCCTGCCTCTGCACACACTCACCTCCTCCACCCCGGTGG TGCTGGTCCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACGATAGCACTGGCCGCCCTGGTGTACTGTGTAAAGAAGATTTACG >In-frame_SPECC1_ENST00000395525_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_557nt ATGGGCAACCACTCAGGACGGCCCGAGGATCCGGAACCAGGGTGAGCTTGTCGGCCACAGACTGCTACATTGTGCATGAGATCTACAATG GGGAGAATGCCCAAGACCAGTTTGAGTACGAGCTGGAGCAGGCCCTGGAAGCCCAGTACAAGTACATTGTGATTGAGCCCACTCGCATTG GCGACGAGACAGCCCGCTGGATCACCGTGGGCAACTGCCTGCACAAGACGGCCGTGCTGGCGGGCACCGCCTGCCTCTTCACCCCGTTGG CGCTGCCCTTAGATTATTCCCACTACATTTCCCTGCCCGCTGGTGTGCTGAGCCTGGCCTGCTGCACCCTCTATGGGATCTCCTGGCAGT TTGACCCTTGCTGCAAGTACCAAGTGGAGTACGACGCCTATAAACTGTCGCGCCTGCCTCTGCACACACTCACCTCCTCCACCCCGGTGG TGCTGGTCCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACGATAGCACTGGCCGCCCTGGTGTACTGTGTAAAGAAGATTTACG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SPECC1_ENST00000395530_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_1809nt GATGCAGATGAGGGGGCGGGGCCCACGGGCGCGGGAGAGCAGCGGCTCCGCCGGCAGCTGCTGGGAACTGGAAGGCGCCCGGTCCTTTCT TTGACTGGAGCGGACCCGCCGGACGCAACCGCCTCGCCAGCCGGAGCCAGCGCGAGCTCGGCACGGTGGACACCCGGTCCGAGGCCGGCA AGCCGGCTGGTGCCCGAGTCGGCCAAGCATGGGCAACCACTCAGGACGGCCCGAGGATCCGGAACCAGGGTGAGCTTGTCGGCCACAGAC TGCTACATTGTGCATGAGATCTACAATGGGGAGAATGCCCAAGACCAGTTTGAGTACGAGCTGGAGCAGGCCCTGGAAGCCCAGTACAAG TACATTGTGATTGAGCCCACTCGCATTGGCGACGAGACAGCCCGCTGGATCACCGTGGGCAACTGCCTGCACAAGACGGCCGTGCTGGCG GGCACCGCCTGCCTCTTCACCCCGTTGGCGCTGCCCTTAGATTATTCCCACTACATTTCCCTGCCCGCTGGTGTGCTGAGCCTGGCCTGC TGCACCCTCTATGGGATCTCCTGGCAGTTTGACCCTTGCTGCAAGTACCAAGTGGAGTACGACGCCTATAAACTGTCGCGCCTGCCTCTG CACACACTCACCTCCTCCACCCCGGTGGTGCTGGTCCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACGATAGCACTGGCCGCC CTGGTGTACTGTGTAAAGAAGATTTACGAACTCTATGCCGTATGATTTCAGTAGAACAGGGAGCGAAGCAAAACCACCCGGCCCACAAGA GACAACAGAGTATTCAGATCGCCACACTCTGTGAGGCAGCAGAGCCTGGGCAGGTGTTTGGCTTAGTATTTGTTATTTTTAAAAAATAAC AGATCACGGGTGTACCCAGGGTTTTTCAGCTCATTACACTAAGATGTGGATTTCCATAACCCAAGAGGGGGGTCTGAGGCTGTGGAAGTC CGACTGGGCAGTGGAATGCTGATGGAGGCAGACGCTGCCGAGGGGGTGTGGACGTGCTTTGGGGGAGGTCTTTAAGTCTATTGTTTAACT GTACCATCCAGAGCCCACCAGAAGCTATTGATCATTAAAATTATGAGAATTTCAACTCCCGCTGTTCTCTCTTTCCATGACTGCCCGCAG CTGCTGCTGCACATCTGCTCTGGGTGGCGGCTTGCACATGGAAGGAGCAGGTGCCATGGTAGCCACCCTGCCCTGCTCCTAGCTGCGGCC CAGTGTTACCACTTACAGCGACGACAAGCCTAGATCCAAGGTAGTCCTGGGGCCAAACCCCGCCCAGGAGCAGTCTCCTGGCTCACCTTG GCCTCATCATTCCGAAGGCCATCACTGCCACCATGCTGTTCAGGAACATGGTAGGATAAGGTGACGAGGCTTGGAGGCCTTTGGGTGTCC ACTTGAGTTCACGTGGGGAACTCTGGGCTCCAGGATCGCTCTTCAGAGATCTGAACACCTGTGTTTTCTTTGAAGCACCAAAACTCTTCC TACTGTGGACCATGAGTTTATTAACCCATTGCCCTAGGCTGACAGAAGAGCCCTCGGAGCAATCTTGGAAGCACCCCCTGGCCTCAGTGC TCGCTGTTCCACAGGAGCCAAGCCGGTGCTTCTCCCTCACACCAGAAGGTAGACTGTGTCACCTGCCACATTTCCTCTAAGGCAGGGGTG GCCAATCTTGACTTCCCTGTGCCACATTGGAAAAAGAATTGTCTTGGACCACACATAAAATACACTAACGACAGCTGATGAGCTAAAAAA >In-frame_SPECC1_ENST00000395522_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_1715nt CTGGAGCGGACCCGCCGGACGCAACCGCCTCGCCAGCCGGAGCCAGCGCGAGCTCGGCACGGTGGACACCCGGTCCGAGGCCGGCAAGCC GGCTGGTGCCCGAGTCGGCCAAGCATGGGCAACCACTCAGGACGGCCCGAGGATCCGGAACCAGGGTGAGCTTGTCGGCCACAGACTGCT ACATTGTGCATGAGATCTACAATGGGGAGAATGCCCAAGACCAGTTTGAGTACGAGCTGGAGCAGGCCCTGGAAGCCCAGTACAAGTACA TTGTGATTGAGCCCACTCGCATTGGCGACGAGACAGCCCGCTGGATCACCGTGGGCAACTGCCTGCACAAGACGGCCGTGCTGGCGGGCA CCGCCTGCCTCTTCACCCCGTTGGCGCTGCCCTTAGATTATTCCCACTACATTTCCCTGCCCGCTGGTGTGCTGAGCCTGGCCTGCTGCA CCCTCTATGGGATCTCCTGGCAGTTTGACCCTTGCTGCAAGTACCAAGTGGAGTACGACGCCTATAAACTGTCGCGCCTGCCTCTGCACA CACTCACCTCCTCCACCCCGGTGGTGCTGGTCCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACGATAGCACTGGCCGCCCTGG TGTACTGTGTAAAGAAGATTTACGAACTCTATGCCGTATGATTTCAGTAGAACAGGGAGCGAAGCAAAACCACCCGGCCCACAAGAGACA ACAGAGTATTCAGATCGCCACACTCTGTGAGGCAGCAGAGCCTGGGCAGGTGTTTGGCTTAGTATTTGTTATTTTTAAAAAATAACAGAT CACGGGTGTACCCAGGGTTTTTCAGCTCATTACACTAAGATGTGGATTTCCATAACCCAAGAGGGGGGTCTGAGGCTGTGGAAGTCCGAC TGGGCAGTGGAATGCTGATGGAGGCAGACGCTGCCGAGGGGGTGTGGACGTGCTTTGGGGGAGGTCTTTAAGTCTATTGTTTAACTGTAC CATCCAGAGCCCACCAGAAGCTATTGATCATTAAAATTATGAGAATTTCAACTCCCGCTGTTCTCTCTTTCCATGACTGCCCGCAGCTGC TGCTGCACATCTGCTCTGGGTGGCGGCTTGCACATGGAAGGAGCAGGTGCCATGGTAGCCACCCTGCCCTGCTCCTAGCTGCGGCCCAGT GTTACCACTTACAGCGACGACAAGCCTAGATCCAAGGTAGTCCTGGGGCCAAACCCCGCCCAGGAGCAGTCTCCTGGCTCACCTTGGCCT CATCATTCCGAAGGCCATCACTGCCACCATGCTGTTCAGGAACATGGTAGGATAAGGTGACGAGGCTTGGAGGCCTTTGGGTGTCCACTT GAGTTCACGTGGGGAACTCTGGGCTCCAGGATCGCTCTTCAGAGATCTGAACACCTGTGTTTTCTTTGAAGCACCAAAACTCTTCCTACT GTGGACCATGAGTTTATTAACCCATTGCCCTAGGCTGACAGAAGAGCCCTCGGAGCAATCTTGGAAGCACCCCCTGGCCTCAGTGCTCGC TGTTCCACAGGAGCCAAGCCGGTGCTTCTCCCTCACACCAGAAGGTAGACTGTGTCACCTGCCACATTTCCTCTAAGGCAGGGGTGGCCA ATCTTGACTTCCCTGTGCCACATTGGAAAAAGAATTGTCTTGGACCACACATAAAATACACTAACGACAGCTGATGAGCTAAAAAAAAAA >In-frame_SPECC1_ENST00000395525_chr17_20059549_+_TMEM11_ENST00000317635_chr17_21102153_-_1709nt CGGACCCGCCGGACGCAACCGCCTCGCCAGCCGGAGCCAGCGCGAGCTCGGCACGGTGGACACCCGGTCCGAGGCCGGCAAGCCGGCTGG TGCCCGAGTCGGCCAAGCATGGGCAACCACTCAGGACGGCCCGAGGATCCGGAACCAGGGTGAGCTTGTCGGCCACAGACTGCTACATTG TGCATGAGATCTACAATGGGGAGAATGCCCAAGACCAGTTTGAGTACGAGCTGGAGCAGGCCCTGGAAGCCCAGTACAAGTACATTGTGA TTGAGCCCACTCGCATTGGCGACGAGACAGCCCGCTGGATCACCGTGGGCAACTGCCTGCACAAGACGGCCGTGCTGGCGGGCACCGCCT GCCTCTTCACCCCGTTGGCGCTGCCCTTAGATTATTCCCACTACATTTCCCTGCCCGCTGGTGTGCTGAGCCTGGCCTGCTGCACCCTCT ATGGGATCTCCTGGCAGTTTGACCCTTGCTGCAAGTACCAAGTGGAGTACGACGCCTATAAACTGTCGCGCCTGCCTCTGCACACACTCA CCTCCTCCACCCCGGTGGTGCTGGTCCGGAAGGACGACCTGCACAGAAAGAGACTGCACAACACGATAGCACTGGCCGCCCTGGTGTACT GTGTAAAGAAGATTTACGAACTCTATGCCGTATGATTTCAGTAGAACAGGGAGCGAAGCAAAACCACCCGGCCCACAAGAGACAACAGAG TATTCAGATCGCCACACTCTGTGAGGCAGCAGAGCCTGGGCAGGTGTTTGGCTTAGTATTTGTTATTTTTAAAAAATAACAGATCACGGG TGTACCCAGGGTTTTTCAGCTCATTACACTAAGATGTGGATTTCCATAACCCAAGAGGGGGGTCTGAGGCTGTGGAAGTCCGACTGGGCA GTGGAATGCTGATGGAGGCAGACGCTGCCGAGGGGGTGTGGACGTGCTTTGGGGGAGGTCTTTAAGTCTATTGTTTAACTGTACCATCCA GAGCCCACCAGAAGCTATTGATCATTAAAATTATGAGAATTTCAACTCCCGCTGTTCTCTCTTTCCATGACTGCCCGCAGCTGCTGCTGC ACATCTGCTCTGGGTGGCGGCTTGCACATGGAAGGAGCAGGTGCCATGGTAGCCACCCTGCCCTGCTCCTAGCTGCGGCCCAGTGTTACC ACTTACAGCGACGACAAGCCTAGATCCAAGGTAGTCCTGGGGCCAAACCCCGCCCAGGAGCAGTCTCCTGGCTCACCTTGGCCTCATCAT TCCGAAGGCCATCACTGCCACCATGCTGTTCAGGAACATGGTAGGATAAGGTGACGAGGCTTGGAGGCCTTTGGGTGTCCACTTGAGTTC ACGTGGGGAACTCTGGGCTCCAGGATCGCTCTTCAGAGATCTGAACACCTGTGTTTTCTTTGAAGCACCAAAACTCTTCCTACTGTGGAC CATGAGTTTATTAACCCATTGCCCTAGGCTGACAGAAGAGCCCTCGGAGCAATCTTGGAAGCACCCCCTGGCCTCAGTGCTCGCTGTTCC ACAGGAGCCAAGCCGGTGCTTCTCCCTCACACCAGAAGGTAGACTGTGTCACCTGCCACATTTCCTCTAAGGCAGGGGTGGCCAATCTTG |
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FusionGenePPI for SPECC1_TMEM11 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SPECC1 | DAXX, TRAF2, PAN2, HECW2, NXF1, CCDC8, RNF2, SLC25A41, CAPZA2, DBN1, FLNA, MYH9, MYO1C, PPP1CB, RAB5A, IQGAP1, ACTR2, ATP6AP2, SYNPO, MAPRE1, LIMA1, ANLN, MYO5C, MYO19, MYO18A, PCGF1, DPPA4, NANOG, POU5F1, CDH1, RAB11FIP4, PCDHGB1, PCDHB11 | TMEM11 | BNIP3, BNIP3L, CLN8, SUV39H1, MOV10, ADORA3, AGTR1, P2RY8, TMPRSS11A, FATE1, CREB3L1, COQ9, DUSP12, DUSP22, DUSP6, DUSP9, SLC7A1, BCAM, SDC2, MAS1, IMPDH1, IPPK, LRRC32, SLC5A8, LPAR1, CD4, SLC39A12, NTRK3, SLC2A12, ST8SIA3, LMNA |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SPECC1_TMEM11 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SPECC1_TMEM11 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |