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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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Fusion gene ID: 35565

FusionGeneSummary for SPATA13_MIPEP

check button Fusion gene summary
Fusion gene informationFusion gene name: SPATA13_MIPEP
Fusion gene ID: 35565
HgeneTgene
Gene symbol

SPATA13

MIPEP

Gene ID

221178

4285

Gene namespermatogenesis associated 13mitochondrial intermediate peptidase
SynonymsARHGEF29|ASEF2COXPD31|HMIP|MIP
Cytomap

13q12.12

13q12.12

Type of geneprotein-codingprotein-coding
Descriptionspermatogenesis-associated protein 13APC-stimulated guanine nucleotide exchange factor 2adenomatous polyposis coli stimulated exchange factor 2mitochondrial intermediate peptidase
Modification date2018051920180523
UniProtAcc

Q96N96

Q99797

Ensembl transtripts involved in fusion geneENST00000424834, ENST00000382108, 
ENST00000382095, ENST00000474317, 
ENST00000399949, ENST00000409126, 
ENST00000343003, 		ENST00000382172, 
ENST00000469167, 
Fusion gene scores* DoF score7 X 5 X 5=1759 X 7 X 7=441
# samples 79
** MAII scorelog2(7/175*10)=-1.32192809488736
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0		log2(9/441*10)=-2.29278174922785
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SPATA13 [Title/Abstract] AND MIPEP [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGALDPRADTCGA-EJ-5497-01ASPATA13chr13

24798720

+MIPEPchr13

24384063

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000424834ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
5CDS-intronENST00000424834ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-
In-frameENST00000382108ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
5CDS-intronENST00000382108ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-3CDSENST00000382095ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-intronENST00000382095ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-
3UTR-3CDSENST00000474317ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
3UTR-intronENST00000474317ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-3CDSENST00000399949ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-intronENST00000399949ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-3CDSENST00000409126ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-intronENST00000409126ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-3CDSENST00000343003ENST00000382172SPATA13chr13

24798720

+MIPEPchr13

24384063

-
intron-intronENST00000343003ENST00000469167SPATA13chr13

24798720

+MIPEPchr13

24384063

-

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FusionProtFeatures for SPATA13_MIPEP


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SPATA13

Q96N96

MIPEP

Q99797

Cleaves proteins, imported into the mitochondrion, totheir mature size.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneSPATA13chr13:24798720chr13:24384063ENST00000343003+11120_23-72597Compositional biasNote=Poly-Arg
HgeneSPATA13chr13:24798720chr13:24384063ENST00000382095+11220_23-136653Compositional biasNote=Poly-Arg
HgeneSPATA13chr13:24798720chr13:24384063ENST00000399949+11020_23-57575Compositional biasNote=Poly-Arg
HgeneSPATA13chr13:24798720chr13:24384063ENST00000343003+111147_206-72597DomainSH3
HgeneSPATA13chr13:24798720chr13:24384063ENST00000343003+111240_424-72597DomainDH
HgeneSPATA13chr13:24798720chr13:24384063ENST00000343003+111455_561-72597DomainPH
HgeneSPATA13chr13:24798720chr13:24384063ENST00000382095+112147_206-136653DomainSH3
HgeneSPATA13chr13:24798720chr13:24384063ENST00000382095+112240_424-136653DomainDH
HgeneSPATA13chr13:24798720chr13:24384063ENST00000382095+112455_561-136653DomainPH
HgeneSPATA13chr13:24798720chr13:24384063ENST00000399949+110147_206-57575DomainSH3
HgeneSPATA13chr13:24798720chr13:24384063ENST00000399949+110240_424-57575DomainDH
HgeneSPATA13chr13:24798720chr13:24384063ENST00000399949+110455_561-57575DomainPH
HgeneSPATA13chr13:24798720chr13:24384063ENST00000343003+111561_652-72597RegionNote=C-terminal tail
HgeneSPATA13chr13:24798720chr13:24384063ENST00000343003+11198_150-72597RegionNote=ABR (APC-binding region) domain
HgeneSPATA13chr13:24798720chr13:24384063ENST00000382095+112561_652-136653RegionNote=C-terminal tail
HgeneSPATA13chr13:24798720chr13:24384063ENST00000382095+11298_150-136653RegionNote=ABR (APC-binding region) domain
HgeneSPATA13chr13:24798720chr13:24384063ENST00000399949+110561_652-57575RegionNote=C-terminal tail
HgeneSPATA13chr13:24798720chr13:24384063ENST00000399949+11098_150-57575RegionNote=ABR (APC-binding region) domain


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FusionGeneSequence for SPATA13_MIPEP


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_SPATA13_ENST00000424834_chr13_24798720_+_MIPEP_ENST00000382172_chr13_24384063_-_714aa
MTQAAVRPWAPCLENMTTAPNGLGPGPAAPCAGSDLKDAKMVTSLACGNGVCGCSPGGDTDTQEAKLSPAKLVRLFSTSRKRTGAHPERP
HSMVLVGNSSTWNTLASFRKMGSFKKLKSSVLKGIQSREGSNACSKGEASEHGLGKSIPNGAVPGAQASRGSPLAPGPACGALRPAEWGT
LDGSDLEDTDDAFQRSTHRSRSLRRAYGLGRICLLDAPQNHATPTIATGQVPAVCEILVRDPENNSMGYRRSKSTDNLAFLKKSSFKRKS
TSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSPIRAKDFDRVFKLVSNVTEAAWRRESPRSGAPSPGEASLRLQAHSRLHDD
YSRRVSRSTEQDSRRGGAVMHGTTATCTVAPGFGSATSKGPHLDADTAVFPLETKSSWAVESDSSCTCSSLPSPIVQDVLSKDSCDPNAG
SQLTFDPEQPPTPLRPTTPKPQSPQSPQSPGAGSASCHSNHSALSANSEESEGRAEEPAQREPGPVSLQDPLEATHGDEGSKDLLVNIGV
AAGPEEKEKEEPLPKNMVSRLCESKKVCAAADMQLQVFYATLDQIYHGKHPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGA

>In-frame_SPATA13_ENST00000382108_chr13_24798720_+_MIPEP_ENST00000382172_chr13_24384063_-_714aa
MTQAAVRPWAPCLENMTTAPNGLGPGPAAPCAGSDLKDAKMVTSLACGNGVCGCSPGGDTDTQEAKLSPAKLVRLFSTSRKRTGAHPERP
HSMVLVGNSSTWNTLASFRKMGSFKKLKSSVLKGIQSREGSNACSKGEASEHGLGKSIPNGAVPGAQASRGSPLAPGPACGALRPAEWGT
LDGSDLEDTDDAFQRSTHRSRSLRRAYGLGRICLLDAPQNHATPTIATGQVPAVCEILVRDPENNSMGYRRSKSTDNLAFLKKSSFKRKS
TSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSPIRAKDFDRVFKLVSNVTEAAWRRESPRSGAPSPGEASLRLQAHSRLHDD
YSRRVSRSTEQDSRRGGAVMHGTTATCTVAPGFGSATSKGPHLDADTAVFPLETKSSWAVESDSSCTCSSLPSPIVQDVLSKDSCDPNAG
SQLTFDPEQPPTPLRPTTPKPQSPQSPQSPGAGSASCHSNHSALSANSEESEGRAEEPAQREPGPVSLQDPLEATHGDEGSKDLLVNIGV
AAGPEEKEKEEPLPKNMVSRLCESKKVCAAADMQLQVFYATLDQIYHGKHPLRNSTTDILKETQEKFYGLPYVPNTAWQLRFSHLVGYGA


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_SPATA13_ENST00000424834_chr13_24798720_+_MIPEP_ENST00000382172_chr13_24384063_-_2142nt
ATGACCCAGGCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAACATGACCACTGCCCCAAACGGCCTCGGGCCAGGCCCCGCAGCCCCC
TGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACACG
GACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCC
CACTCCATGGTCCTGGTGGGGAACTCCTCCACATGGAACACCCTCGCCTCCTTCCGGAAAATGGGATCCTTTAAGAAACTGAAGTCCTCA
GTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAAT
GGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAGCACCGGGACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACA
TTGGATGGCTCCGACCTCGAGGACACGGACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGGGC
CGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGAGG
GACCCTGAAAACAACAGCATGGGCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGAAGAAGAGCTCCTTTAAGCGGAAGTCC
ACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTT
GGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGTGACTGAGGCT
GCCTGGAGGAGGGAGAGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCTGCATGACGAC
TACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAGCAGGCGGGGCGGGGCGGTCATGCATGGGACCACTGCAACCTGCACCGTGGCC
CCCGGTTTCGGCTCAGCCACCTCTAAGGGGCCCCACCTAGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTG
GAAAGCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGC
AGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCACCACACCCAAGCCCCAGAGCCCTCAGAGCCCCCAGAGCCCC
GGGGCAGGAAGTGCCAGCTGTCACAGCAATCACAGTGCCCTGTCCGCGAATTCAGAGGAAAGTGAAGGAAGGGCAGAAGAGCCTGCTCAG
AGAGAGCCAGGGCCTGTGTCCTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTG
GCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGCCACTGCCAAAAAATATGGTGTCTCGTCTTTGTGAATCTAAAAAGGTTTGTGCTGCA
GCTGATATGCAACTTCAGGTCTTTTATGCCACTCTGGATCAAATCTACCATGGGAAGCATCCCCTGAGGAATTCAACCACAGACATTCTC
AAGGAAACACAAGAGAAATTCTATGGCCTACCATATGTTCCAAATACTGCCTGGCAGCTGCGATTCAGCCACCTCGTGGGGTATGGTGCT
AGATATTACTCTTACCTCATGTCCAGAGCGGTCGCCTCCATGGTTTGGAAGGAGTGTTTTCTACAGGATCCTTTCAACAGGGCTGCCGGG
GAGCGCTATCGCAGGGAGATGCTGGCCCACGGTGGAGGCAGGGAGCCCATGCTCATGGTTGAAGGTATGCTTCAGAAGTGTCCTTCTGTT

>In-frame_SPATA13_ENST00000382108_chr13_24798720_+_MIPEP_ENST00000382172_chr13_24384063_-_2142nt
ATGACCCAGGCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAACATGACCACTGCCCCAAACGGCCTCGGGCCAGGCCCCGCAGCCCCC
TGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACACG
GACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCC
CACTCCATGGTCCTGGTGGGGAACTCCTCCACATGGAACACCCTCGCCTCCTTCCGGAAAATGGGATCCTTTAAGAAACTGAAGTCCTCA
GTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAAT
GGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAGCACCGGGACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACA
TTGGATGGCTCCGACCTCGAGGACACGGACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGGGC
CGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGAGG
GACCCTGAAAACAACAGCATGGGCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGAAGAAGAGCTCCTTTAAGCGGAAGTCC
ACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTT
GGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGTGACTGAGGCT
GCCTGGAGGAGGGAGAGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCTGCATGACGAC
TACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAGCAGGCGGGGCGGGGCGGTCATGCATGGGACCACTGCAACCTGCACCGTGGCC
CCCGGTTTCGGCTCAGCCACCTCTAAGGGGCCCCACCTAGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTG
GAAAGCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGC
AGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCACCACACCCAAGCCCCAGAGCCCTCAGAGCCCCCAGAGCCCC
GGGGCAGGAAGTGCCAGCTGTCACAGCAATCACAGTGCCCTGTCCGCGAATTCAGAGGAAAGTGAAGGAAGGGCAGAAGAGCCTGCTCAG
AGAGAGCCAGGGCCTGTGTCCTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTG
GCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGCCACTGCCAAAAAATATGGTGTCTCGTCTTTGTGAATCTAAAAAGGTTTGTGCTGCA
GCTGATATGCAACTTCAGGTCTTTTATGCCACTCTGGATCAAATCTACCATGGGAAGCATCCCCTGAGGAATTCAACCACAGACATTCTC
AAGGAAACACAAGAGAAATTCTATGGCCTACCATATGTTCCAAATACTGCCTGGCAGCTGCGATTCAGCCACCTCGTGGGGTATGGTGCT
AGATATTACTCTTACCTCATGTCCAGAGCGGTCGCCTCCATGGTTTGGAAGGAGTGTTTTCTACAGGATCCTTTCAACAGGGCTGCCGGG
GAGCGCTATCGCAGGGAGATGCTGGCCCACGGTGGAGGCAGGGAGCCCATGCTCATGGTTGAAGGTATGCTTCAGAAGTGTCCTTCTGTT


* Fusion transcript sequences (Full-length transcript).
>In-frame_SPATA13_ENST00000424834_chr13_24798720_+_MIPEP_ENST00000382172_chr13_24384063_-_2774nt
GCGCACCCGGGACAGTTTCCAGTCGGCTTCTCCGTGACCTTCCTCCCCCTTCCAGCTCGGAGCGGGATGCTGGGATCCCTCCAAGGACCC
TCTGAGGACGTAGGAGGGATGCTGAGACAGGGCCAGCTTCAAACCTTGTCAAGCTCTGACAAGGGAAGATGAAGCCTAGTTCCAGCTAGG
GGTGACCTGTCTATCTGCATTTTTTGAGCTGCAGAGTGATGGGAGTCATATTCGCTGCCTGTGCAGCACCACAGGCCTGATGAAAATGAA
ATGGCAACACCGTGCAGATGGCAAAGCGTAGGCCTCACAAACATCCTGGCCGTGAAGAGCTTGTCTTCAAGAGTAGCTGGTGCAGAAACT
CGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCCTGGAGATGAAGGCCTGGAGCTGCGGTCTG
CGGACTCGGCAGTGCCCGTGGCCATGACCCAGGCTGCCGTGCGGCCCTGGGCACCCTGCCTGGAGAACATGACCACTGCCCCAAACGGCC
TCGGGCCAGGCCCCGCAGCCCCCTGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGACCTCCCTTGCGTGTGGAAATGGAGTCTGTG
GCTGCAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGTGCGCCTCTTTTCCACCAGTCGGAAGAGGA
CGGGTGCCCACCCCGAGCGGCCCCACTCCATGGTCCTGGTGGGGAACTCCTCCACATGGAACACCCTCGCCTCCTTCCGGAAAATGGGAT
CCTTTAAGAAACTGAAGTCCTCAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGCCTGTTCAAAGGGAGAGGCTTCGGAGCATG
GCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCCCTTAGCACCGGGACCAGCATGTGGTGCCC
TCAGGCCAGCAGAGTGGGGCACATTGGATGGCTCCGACCTCGAGGACACGGACGATGCCTTCCAGCGGAGCACACACCGCTCCCGCAGCC
TCCGCAGAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGACACCCACGATAGCCACTGGCCAGGTGCCCG
CCGTGTGTGAGATTCTCGTGAGGGACCCTGAAAACAACAGCATGGGCTACAGGAGGAGCAAGAGCACGGACAATCTTGCCTTTCTGAAGA
AGAGCTCCTTTAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGCACGGGTACCACAGAGGACCCTGAGCAGTT
CCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAGGGCCAAGGACTTTGACAGAGTCTTCAAAC
TTGTGAGCAATGTGACTGAGGCTGCCTGGAGGAGGGAGAGTCCTAGGAGTGGGGCCCCATCCCCTGGAGAGGCCAGCCTGAGACTTCAGG
CACACAGCCGGCTGCATGACGACTACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAGCAGGCGGGGCGGGGCGGTCATGCATGGGA
CCACTGCAACCTGCACCGTGGCCCCCGGTTTCGGCTCAGCCACCTCTAAGGGGCCCCACCTAGACGCTGACACTGCCGTATTTCCTCTTG
AAACCAAAAGTTCCTGGGCGGTGGAAAGCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAGCCCGATTGTCCAGGATGTGTTGAGCAAAG
ACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCCTCTAAGGCCCACCACACCCAAGCCCCAGA
GCCCTCAGAGCCCCCAGAGCCCCGGGGCAGGAAGTGCCAGCTGTCACAGCAATCACAGTGCCCTGTCCGCGAATTCAGAGGAAAGTGAAG
GAAGGGCAGAAGAGCCTGCTCAGAGAGAGCCAGGGCCTGTGTCCTTGCAGGATCCCCTGGAAGCCACACATGGTGATGAGGGCAGCAAGG
ACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGCCACTGCCAAAAAATATGGTGTCTCGTCTTTGTG
AATCTAAAAAGGTTTGTGCTGCAGCTGATATGCAACTTCAGGTCTTTTATGCCACTCTGGATCAAATCTACCATGGGAAGCATCCCCTGA
GGAATTCAACCACAGACATTCTCAAGGAAACACAAGAGAAATTCTATGGCCTACCATATGTTCCAAATACTGCCTGGCAGCTGCGATTCA
GCCACCTCGTGGGGTATGGTGCTAGATATTACTCTTACCTCATGTCCAGAGCGGTCGCCTCCATGGTTTGGAAGGAGTGTTTTCTACAGG
ATCCTTTCAACAGGGCTGCCGGGGAGCGCTATCGCAGGGAGATGCTGGCCCACGGTGGAGGCAGGGAGCCCATGCTCATGGTTGAAGGTA
TGCTTCAGAAGTGTCCTTCTGTTGATGACTTCGTAAGTGCCCTCGTTTCCGACTTGGATCTGGACTTCGAAACTTTCCTCATGGATTCTG
AATAAAAGAAACACTCTACACCTCTTAAATCAAGGTCATGTAGATAATGACTTTGTTATAAATGCTACAGCTGTGAGAGCTTGTTTCTGA

>In-frame_SPATA13_ENST00000382108_chr13_24798720_+_MIPEP_ENST00000382172_chr13_24384063_-_2623nt
GTGTGCTGCCGCGGCGCGGGAGGAGAGTGTGCGTTGCGCTTTCTCCCGCGATCGCCCTGCCGGTCGCTAGCTCCGAGGGCGCGCACTGGA
TCCCAGGCTCCTCCGAGAGTGCGGCGACCTCGGGGCTCCGCCGGCACCGGAGGTGGCTCTGAGGGCAGGGACGTGTTGGACACGCTGACT
TTGTAGGCTCCGCCAAGAGGCGCCGCAGGAGCCCGTGGCCACCCAGGAGCCCGATGTGCAAGGCAGGTGTGAGTGCCAGGACGGCATTCC
TGGAGATGAAGGCCTGGAGCTGCGGTCTGCGGACTCGGCAGTGCCCGTGGCCATGACCCAGGCTGCCGTGCGGCCCTGGGCACCCTGCCT
GGAGAACATGACCACTGCCCCAAACGGCCTCGGGCCAGGCCCCGCAGCCCCCTGTGCAGGCTCGGACCTGAAAGACGCCAAGATGGTGAC
CTCCCTTGCGTGTGGAAATGGAGTCTGTGGCTGCAGCCCTGGTGGCGACACGGACACCCAGGAAGCCAAACTCAGCCCAGCCAAGCTTGT
GCGCCTCTTTTCCACCAGTCGGAAGAGGACGGGTGCCCACCCCGAGCGGCCCCACTCCATGGTCCTGGTGGGGAACTCCTCCACATGGAA
CACCCTCGCCTCCTTCCGGAAAATGGGATCCTTTAAGAAACTGAAGTCCTCAGTCCTGAAAGGAATTCAGAGCCGAGAGGGGTCAAATGC
CTGTTCAAAGGGAGAGGCTTCGGAGCATGGCCTGGGAAAGTCCATCCCAAATGGCGCTGTCCCAGGAGCCCAGGCAAGCAGGGGCTCCCC
CTTAGCACCGGGACCAGCATGTGGTGCCCTCAGGCCAGCAGAGTGGGGCACATTGGATGGCTCCGACCTCGAGGACACGGACGATGCCTT
CCAGCGGAGCACACACCGCTCCCGCAGCCTCCGCAGAGCCTACGGCCTGGGCCGCATCTGCCTGCTGGATGCGCCCCAGAACCATGCGAC
ACCCACGATAGCCACTGGCCAGGTGCCCGCCGTGTGTGAGATTCTCGTGAGGGACCCTGAAAACAACAGCATGGGCTACAGGAGGAGCAA
GAGCACGGACAATCTTGCCTTTCTGAAGAAGAGCTCCTTTAAGCGGAAGTCCACCTCCAATCTTGCAGACCTCAGGACGGCCCATGACGC
ACGGGTACCACAGAGGACCCTGAGCAGTTCCTCCACTGACTCCCAAAAGCTTGGGTCAGGAAGGACCAAACGCTGGAGGAGCCCGATAAG
GGCCAAGGACTTTGACAGAGTCTTCAAACTTGTGAGCAATGTGACTGAGGCTGCCTGGAGGAGGGAGAGTCCTAGGAGTGGGGCCCCATC
CCCTGGAGAGGCCAGCCTGAGACTTCAGGCACACAGCCGGCTGCATGACGACTACTCCCGCCGCGTCTCCAGGAGCACTGAGCAGGACAG
CAGGCGGGGCGGGGCGGTCATGCATGGGACCACTGCAACCTGCACCGTGGCCCCCGGTTTCGGCTCAGCCACCTCTAAGGGGCCCCACCT
AGACGCTGACACTGCCGTATTTCCTCTTGAAACCAAAAGTTCCTGGGCGGTGGAAAGCGACAGTTCCTGCACTTGCAGCTCTTTGCCAAG
CCCGATTGTCCAGGATGTGTTGAGCAAAGACTCCTGTGACCCAAACGCTGGCAGCCAGTTGACATTTGACCCTGAGCAGCCTCCCACCCC
TCTAAGGCCCACCACACCCAAGCCCCAGAGCCCTCAGAGCCCCCAGAGCCCCGGGGCAGGAAGTGCCAGCTGTCACAGCAATCACAGTGC
CCTGTCCGCGAATTCAGAGGAAAGTGAAGGAAGGGCAGAAGAGCCTGCTCAGAGAGAGCCAGGGCCTGTGTCCTTGCAGGATCCCCTGGA
AGCCACACATGGTGATGAGGGCAGCAAGGACCTTCTGGTGAACATTGGTGTGGCAGCCGGCCCAGAAGAAAAGGAGAAGGAGGAGCCACT
GCCAAAAAATATGGTGTCTCGTCTTTGTGAATCTAAAAAGGTTTGTGCTGCAGCTGATATGCAACTTCAGGTCTTTTATGCCACTCTGGA
TCAAATCTACCATGGGAAGCATCCCCTGAGGAATTCAACCACAGACATTCTCAAGGAAACACAAGAGAAATTCTATGGCCTACCATATGT
TCCAAATACTGCCTGGCAGCTGCGATTCAGCCACCTCGTGGGGTATGGTGCTAGATATTACTCTTACCTCATGTCCAGAGCGGTCGCCTC
CATGGTTTGGAAGGAGTGTTTTCTACAGGATCCTTTCAACAGGGCTGCCGGGGAGCGCTATCGCAGGGAGATGCTGGCCCACGGTGGAGG
CAGGGAGCCCATGCTCATGGTTGAAGGTATGCTTCAGAAGTGTCCTTCTGTTGATGACTTCGTAAGTGCCCTCGTTTCCGACTTGGATCT
GGACTTCGAAACTTTCCTCATGGATTCTGAATAAAAGAAACACTCTACACCTCTTAAATCAAGGTCATGTAGATAATGACTTTGTTATAA
ATGCTACAGCTGTGAGAGCTTGTTTCTGATTTCATTGTTCGCTTCTGTAATTCTGAAAAACTTTAAACTGGTAGAACTTGGAATAAATAA


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FusionGenePPI for SPATA13_MIPEP


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SPATA13KHDRBS1, YWHAZ, YWHAG, YWHAE, YWHAB, GLDC, YWHAH, YWHAQMIPEPILK, MAPK6, CUL3, MYC, HTT, FOXS1, MRM1, LOC554223, NME4, PAK7, CISD3, CDC42SE1, MGME1, FOXRED2, WDTC1, DCTN1, SPINK2, INA, EXOC3L2, HSDL2, TMEM70, ADPGK, DEFA6, TRIM43, GRPR


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SPATA13_MIPEP


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SPATA13_MIPEP


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource