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Fusion gene ID: 35455 |
FusionGeneSummary for SOX5_IFLTD1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SOX5_IFLTD1 | Fusion gene ID: 35455 | Hgene | Tgene | Gene symbol | SOX5 | IFLTD1 | Gene ID | 6660 | 160492 |
| Gene name | SRY-box 5 | lamin tail domain containing 1 | |
| Synonyms | L-SOX5|L-SOX5B|L-SOX5F|LAMSHF | IFLTD1|LMNARS1|PAS1C1 | |
| Cytomap | 12p12.1 | 12p12.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | transcription factor SOX-5SRY (sex determining region Y)-box 5 | lamin tail domain-containing protein 1intermediate filament tail domain containing 1intermediate filament tail domain-containing protein 1 | |
| Modification date | 20180523 | 20180519 | |
| UniProtAcc | P35711 | ||
| Ensembl transtripts involved in fusion gene | ENST00000546136, ENST00000381381, ENST00000309359, ENST00000451604, ENST00000537393, ENST00000541536, ENST00000396007, ENST00000545921, ENST00000541847, ENST00000441133, ENST00000536850, | ENST00000282881, ENST00000539744, ENST00000458174, ENST00000445693, ENST00000413632, | |
| Fusion gene scores | * DoF score | 9 X 8 X 7=504 | 5 X 3 X 3=45 |
| # samples | 9 | 5 | |
| ** MAII score | log2(9/504*10)=-2.48542682717024 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(5/45*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | |
| Context | PubMed: SOX5 [Title/Abstract] AND IFLTD1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Transcription factor involved fusion gene, inframe and retained DNA-binding domain. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | SOX5 | GO:0032332 | positive regulation of chondrocyte differentiation | 21401405 |
| Hgene | SOX5 | GO:0061036 | positive regulation of cartilage development | 21401405 |
| Hgene | SOX5 | GO:0071560 | cellular response to transforming growth factor beta stimulus | 21401405 |
| Hgene | SOX5 | GO:2000741 | positive regulation of mesenchymal stem cell differentiation | 21401405 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | UCEC | TCGA-A5-A1OH-01A | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| In-frame | ENST00000546136 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000546136 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000546136 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000546136 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000546136 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| Frame-shift | ENST00000381381 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000381381 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000381381 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000381381 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000381381 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| Frame-shift | ENST00000309359 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000309359 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000309359 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000309359 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000309359 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| In-frame | ENST00000451604 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000451604 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000451604 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000451604 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000451604 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| In-frame | ENST00000537393 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000537393 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000537393 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000537393 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000537393 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| In-frame | ENST00000541536 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000541536 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000541536 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000541536 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000541536 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-3CDS | ENST00000396007 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000396007 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000396007 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000396007 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000396007 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| In-frame | ENST00000545921 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000545921 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-5UTR | ENST00000545921 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000545921 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| 5CDS-intron | ENST00000545921 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-3CDS | ENST00000541847 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000541847 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000541847 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000541847 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000541847 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-3CDS | ENST00000441133 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000441133 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000441133 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000441133 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000441133 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-3CDS | ENST00000536850 | ENST00000282881 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000536850 | ENST00000539744 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-5UTR | ENST00000536850 | ENST00000458174 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000536850 | ENST00000445693 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
| intron-intron | ENST00000536850 | ENST00000413632 | SOX5 | chr12 | 23793746 | - | IFLTD1 | chr12 | 25702480 | - |
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FusionProtFeatures for SOX5_IFLTD1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| SOX5 | IFLTD1 |
| Lectin that binds to various sugars: galactose > mannose= fucose > N-acetylglucosamine > N-acetylgalactosamine(PubMed:10224141). Acts as a chemoattractant, probably involved inthe regulation of cell migration (PubMed:28301481).{ECO:0000269|PubMed:10224141, ECO:0000269|PubMed:28301481}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | SOX5 | chr12:23793746 | chr12:25702480 | ENST00000309359 | - | 8 | 15 | 193_274 | 326 | 751 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | SOX5 | chr12:23793746 | chr12:25702480 | ENST00000381381 | - | 8 | 13 | 193_274 | 326 | 643 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | SOX5 | chr12:23793746 | chr12:25702480 | ENST00000451604 | - | 8 | 15 | 193_274 | 339 | 764 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | SOX5 | chr12:23793746 | chr12:25702480 | ENST00000541536 | - | 7 | 12 | 193_274 | 326 | 643 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | SOX5 | chr12:23793746 | chr12:25702480 | ENST00000545921 | - | 8 | 15 | 193_274 | 329 | 754 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | SOX5 | chr12:23793746 | chr12:25702480 | ENST00000546136 | - | 7 | 14 | 193_274 | 326 | 751 | Coiled coil | Ontology_term=ECO:0000255 |
| Tgene | >IFLTD1 | chr12:23793746 | chr12:25702480 | ENST00000282881 | - | 0 | 9 | 136_254 | 8 | 404 | Domain | LTD |
| Tgene | >IFLTD1 | chr12:23793746 | chr12:25702480 | ENST00000413632 | - | 1 | 9 | 136_254 | 29 | 328 | Domain | LTD |
| Tgene | >IFLTD1 | chr12:23793746 | chr12:25702480 | ENST00000445693 | - | 0 | 8 | 136_254 | -1 | 360 | Domain | LTD |
| Tgene | >IFLTD1 | chr12:23793746 | chr12:25702480 | ENST00000458174 | - | 1 | 10 | 136_254 | 29 | 379 | Domain | LTD |
| Tgene | >IFLTD1 | chr12:23793746 | chr12:25702480 | ENST00000539744 | - | 0 | 10 | 136_254 | -131 | 327 | Domain | LTD |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000309359 | - | 8 | 15 | 448_515 | 326 | 751 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000381381 | - | 8 | 13 | 448_515 | 326 | 643 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000396007 | - | 1 | 7 | 193_274 | -20 | 378 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000396007 | - | 1 | 7 | 448_515 | -20 | 378 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000451604 | - | 8 | 15 | 448_515 | 339 | 764 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000541536 | - | 7 | 12 | 448_515 | 326 | 643 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000545921 | - | 8 | 15 | 448_515 | 329 | 754 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000546136 | - | 7 | 14 | 448_515 | 326 | 751 | Coiled coil | Ontology_term=ECO:0000255 |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000309359 | - | 8 | 15 | 556_624 | 326 | 751 | DNA binding | HMG box |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000381381 | - | 8 | 13 | 556_624 | 326 | 643 | DNA binding | HMG box |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000396007 | - | 1 | 7 | 556_624 | -20 | 378 | DNA binding | HMG box |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000451604 | - | 8 | 15 | 556_624 | 339 | 764 | DNA binding | HMG box |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000541536 | - | 7 | 12 | 556_624 | 326 | 643 | DNA binding | HMG box |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000545921 | - | 8 | 15 | 556_624 | 329 | 754 | DNA binding | HMG box |
| Hgene | >SOX5 | chr12:23793746 | chr12:25702480 | ENST00000546136 | - | 7 | 14 | 556_624 | 326 | 751 | DNA binding | HMG box |
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FusionGeneSequence for SOX5_IFLTD1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_SOX5_ENST00000546136_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_326aa MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAP HNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVF >In-frame_SOX5_ENST00000451604_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_339aa MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTM EVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQ >In-frame_SOX5_ENST00000537393_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_304aa MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLS STALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQ LLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLLPPGFS >In-frame_SOX5_ENST00000541536_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_326aa MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAP HNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPE SLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVF >In-frame_SOX5_ENST00000545921_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_329aa MSVMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSS FAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKG TPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMI |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_SOX5_ENST00000546136_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_978nt ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAG AGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTG ACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCA CACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAA CGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCC AGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAG AGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAG AAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAG CAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTC CCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCT >In-frame_SOX5_ENST00000451604_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_1017nt ATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTA GCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAAC AAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATG GAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGT GGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAA ATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATG GGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACC AGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTG GCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAG GTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTC CCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACA >In-frame_SOX5_ENST00000537393_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_912nt ATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTA GCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGAAGTTGATGGCAAT AAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCT AGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATC AAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTT GGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAG CTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAA GAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTG CCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGC TATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCA >In-frame_SOX5_ENST00000541536_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_978nt ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAG AGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTG ACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCA CACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAA CGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCC AGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAG AGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAG AAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAG CAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTC CCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCT >In-frame_SOX5_ENST00000545921_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_987nt ATGTCTGTGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAA GAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTT TCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCA TTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGA ACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAA GAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGG ACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCAC GATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGA CAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATT CCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_SOX5_ENST00000546136_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_2523nt AGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAG GAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTG CTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCC CCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCT GAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACC CCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCC GAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAG CAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAG CAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTA TTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGAC CCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGAAGAGAAGA CAAACTTGGAGTATATTCTTTAGTACATTTTTCCCCAAAGATGTTGGGTTCAGTTGCCACAACACTGCCATTGTCATCTTCAAATTCCAG TGGAATGCCTCTTGGTTACTATCTGTCTAGTCCTCAGATTAGTAGAGTAACTATATCAACAACTGGACAATTGACTTCTAAAGCTACTGT AGGTAGCTGTTCCAGAGTGGAAAACAGCTTGGATGCCAGCCCCTTCTCAGTTCCGAAGAAACAGGATGAATCACCCATGATTGGGGATGG AGAAGATTATTTCCTTTCTTTGTTTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTAT GATTCTTGAAGAAGTTGGCCAATTTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTGTTCGTGAAGCT CATTAACTCTTCCCTTGACAAAGAAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAATGGACAAACCATTTCTTTGTACCGATT CCTTCCAAACATCGTAATGCAGGCAAATTCCACAGTAACAGTGTGGGCAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCT TTGGAAGGAACAAGACAAGTTTAGAGCAAGTCCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCCC TATCCACTGGAAGCAAGCGTGGGAAAAATTAGATGCTGACGTTGAATTTAACAGATGTTCAGTAGTATCTCCAACATTCCGAAAGCGTGT GTTTCAGTGGACAGCATCTACAGCTACAATAACTAAAGAAAAACAAGATCAACCTAAGAAAGATATCTCAAATTATCAGGTGGAACAAGC TCAAGTTCTTCTTAAGAGAGAGAAGGAAATCCCACCAACCGTTTTCCCTAATCGCAGCCCTTGGTGCCAGAATCCCTATGTCTCTGCACA TCCTTACTGTCCTCTGATTGAACCACACAATACATCCACCGCTGGAGGCAGATTGGATAGACAGCCCAGGACTCGGTCAACCAGACCTAA TCGAGCCTCAGGGTCTAAGAAAAAGAAGACATCTGAGTCACAAAAGCAATAAGCAGTCAACTCAACCTTTAAAGTAATCTAGTCCACCCT CAACCAGCTACTAGAAAAGCAAAAGAGAACTCAAATCCCTGAGGCCTGCTCTGCAACCTCCCTGCTATTCCATGAGAGGGTGAAGACATC ACATTTCTATATGGAAAAAGGATCCAAAATTTGTATTGCTGTAGAATTGGTGAATTATAGATGCTTGATGAAATCACAAGTCCTACCACT CCTGCCTTCCAAATCCCTGCAGAAAACAAGCAGATGGTTAGTATTATTCAATGGATAAAATTGCTATTTGCCTTAGATTTCTCTTTTTGT AAACAAAGTTATTTTGGGTACAGAACTCACAAAAGAAGAGCACGTGCAATTGTTTAACCATTTTACATTGACTGATAAATCTCTTTTTTC >In-frame_SOX5_ENST00000451604_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_2661nt GAGAAAATCAATTGGTTTAGAAGGTTTGGACTCACTTGACAGGTTCAGTTGGAGACGATCATAGGTGGCTGCTGTGACAAAGGGAAATTG TGCTTTTCCAGCATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCA GATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTG AGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAG CACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGT GGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTG AAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAG CTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATC AACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAG CAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAG CAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAA GGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCT GCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGAAGAGAAGACAAACTTGGAGTATATTCTTTAGTACATTTTTCCCCAAAGAT GTTGGGTTCAGTTGCCACAACACTGCCATTGTCATCTTCAAATTCCAGTGGAATGCCTCTTGGTTACTATCTGTCTAGTCCTCAGATTAG TAGAGTAACTATATCAACAACTGGACAATTGACTTCTAAAGCTACTGTAGGTAGCTGTTCCAGAGTGGAAAACAGCTTGGATGCCAGCCC CTTCTCAGTTCCGAAGAAACAGGATGAATCACCCATGATTGGGGATGGAGAAGATTATTTCCTTTCTTTGTTTGGTGATTCAAAGAAACT TACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTATGATTCTTGAAGAAGTTGGCCAATTTACCTCCAGTTCTCTTGG AGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTGTTCGTGAAGCTCATTAACTCTTCCCTTGACAAAGAAATGGCAATTGGAGATCA TATTCTCCAGCAAAATGTGAATGGACAAACCATTTCTTTGTACCGATTCCTTCCAAACATCGTAATGCAGGCAAATTCCACAGTAACAGT GTGGGCAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCTTTGGAAGGAACAAGACAAGTTTAGAGCAAGTCCTGATTGTAT AACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCCCTATCCACTGGAAGCAAGCGTGGGAAAAATTAGATGCTGACGT TGAATTTAACAGATGTTCAGTAGTATCTCCAACATTCCGAAAGCGTGTGTTTCAGTGGACAGCATCTACAGCTACAATAACTAAAGAAAA ACAAGATCAACCTAAGAAAGATATCTCAAATTATCAGGTGGAACAAGCTCAAGTTCTTCTTAAGAGAGAGAAGGAAATCCCACCAACCGT TTTCCCTAATCGCAGCCCTTGGTGCCAGAATCCCTATGTCTCTGCACATCCTTACTGTCCTCTGATTGAACCACACAATACATCCACCGC TGGAGGCAGATTGGATAGACAGCCCAGGACTCGGTCAACCAGACCTAATCGAGCCTCAGGGTCTAAGAAAAAGAAGACATCTGAGTCACA AAAGCAATAAGCAGTCAACTCAACCTTTAAAGTAATCTAGTCCACCCTCAACCAGCTACTAGAAAAGCAAAAGAGAACTCAAATCCCTGA GGCCTGCTCTGCAACCTCCCTGCTATTCCATGAGAGGGTGAAGACATCACATTTCTATATGGAAAAAGGATCCAAAATTTGTATTGCTGT AGAATTGGTGAATTATAGATGCTTGATGAAATCACAAGTCCTACCACTCCTGCCTTCCAAATCCCTGCAGAAAACAAGCAGATGGTTAGT ATTATTCAATGGATAAAATTGCTATTTGCCTTAGATTTCTCTTTTTGTAAACAAAGTTATTTTGGGTACAGAACTCACAAAAGAAGAGCA >In-frame_SOX5_ENST00000537393_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_2500nt GATCATAGGTGGCTGCTGTGACAAAGGGAAATTGTGCTTTTCCAGCATGCTTACTGACCCTGATTTACCTCAGGAGTTTGAAAGGATGTC TTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGA CGGGCTCCCAGCCTTTCACCTTCCCTTGCATGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACC TCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGC TGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTC AAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAAGAAAG GCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCCTCTCA GATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAACAACA CAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGGACACT GGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTGATCCC AACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGAAGAGAAGACAAACTTGGAGTATATTCTTTAG TACATTTTTCCCCAAAGATGTTGGGTTCAGTTGCCACAACACTGCCATTGTCATCTTCAAATTCCAGTGGAATGCCTCTTGGTTACTATC TGTCTAGTCCTCAGATTAGTAGAGTAACTATATCAACAACTGGACAATTGACTTCTAAAGCTACTGTAGGTAGCTGTTCCAGAGTGGAAA ACAGCTTGGATGCCAGCCCCTTCTCAGTTCCGAAGAAACAGGATGAATCACCCATGATTGGGGATGGAGAAGATTATTTCCTTTCTTTGT TTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTATGATTCTTGAAGAAGTTGGCCAAT TTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTGTTCGTGAAGCTCATTAACTCTTCCCTTGACAAAG AAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAATGGACAAACCATTTCTTTGTACCGATTCCTTCCAAACATCGTAATGCAGG CAAATTCCACAGTAACAGTGTGGGCAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCTTTGGAAGGAACAAGACAAGTTTA GAGCAAGTCCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCCCTATCCACTGGAAGCAAGCGTGGG AAAAATTAGATGCTGACGTTGAATTTAACAGATGTTCAGTAGTATCTCCAACATTCCGAAAGCGTGTGTTTCAGTGGACAGCATCTACAG CTACAATAACTAAAGAAAAACAAGATCAACCTAAGAAAGATATCTCAAATTATCAGGTGGAACAAGCTCAAGTTCTTCTTAAGAGAGAGA AGGAAATCCCACCAACCGTTTTCCCTAATCGCAGCCCTTGGTGCCAGAATCCCTATGTCTCTGCACATCCTTACTGTCCTCTGATTGAAC CACACAATACATCCACCGCTGGAGGCAGATTGGATAGACAGCCCAGGACTCGGTCAACCAGACCTAATCGAGCCTCAGGGTCTAAGAAAA AGAAGACATCTGAGTCACAAAAGCAATAAGCAGTCAACTCAACCTTTAAAGTAATCTAGTCCACCCTCAACCAGCTACTAGAAAAGCAAA AGAGAACTCAAATCCCTGAGGCCTGCTCTGCAACCTCCCTGCTATTCCATGAGAGGGTGAAGACATCACATTTCTATATGGAAAAAGGAT CCAAAATTTGTATTGCTGTAGAATTGGTGAATTATAGATGCTTGATGAAATCACAAGTCCTACCACTCCTGCCTTCCAAATCCCTGCAGA AAACAAGCAGATGGTTAGTATTATTCAATGGATAAAATTGCTATTTGCCTTAGATTTCTCTTTTTGTAAACAAAGTTATTTTGGGTACAG >In-frame_SOX5_ENST00000541536_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_2524nt CAGGATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGA GGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCT GCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGC CCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCC TGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAAC CCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCC CGAGAGCTTAGCTGAGAAAGAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGA GCAGAAGAAACTAGCTGCCTCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCA GCAGCAGCTTCTACAGCAACAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGT ATTCCCTCCTGATCAACGGACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGA CCCTTACCCTGTTCAGCTGATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGAAGAGAAG ACAAACTTGGAGTATATTCTTTAGTACATTTTTCCCCAAAGATGTTGGGTTCAGTTGCCACAACACTGCCATTGTCATCTTCAAATTCCA GTGGAATGCCTCTTGGTTACTATCTGTCTAGTCCTCAGATTAGTAGAGTAACTATATCAACAACTGGACAATTGACTTCTAAAGCTACTG TAGGTAGCTGTTCCAGAGTGGAAAACAGCTTGGATGCCAGCCCCTTCTCAGTTCCGAAGAAACAGGATGAATCACCCATGATTGGGGATG GAGAAGATTATTTCCTTTCTTTGTTTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTA TGATTCTTGAAGAAGTTGGCCAATTTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTGTTCGTGAAGC TCATTAACTCTTCCCTTGACAAAGAAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAATGGACAAACCATTTCTTTGTACCGAT TCCTTCCAAACATCGTAATGCAGGCAAATTCCACAGTAACAGTGTGGGCAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTC TTTGGAAGGAACAAGACAAGTTTAGAGCAAGTCCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCC CTATCCACTGGAAGCAAGCGTGGGAAAAATTAGATGCTGACGTTGAATTTAACAGATGTTCAGTAGTATCTCCAACATTCCGAAAGCGTG TGTTTCAGTGGACAGCATCTACAGCTACAATAACTAAAGAAAAACAAGATCAACCTAAGAAAGATATCTCAAATTATCAGGTGGAACAAG CTCAAGTTCTTCTTAAGAGAGAGAAGGAAATCCCACCAACCGTTTTCCCTAATCGCAGCCCTTGGTGCCAGAATCCCTATGTCTCTGCAC ATCCTTACTGTCCTCTGATTGAACCACACAATACATCCACCGCTGGAGGCAGATTGGATAGACAGCCCAGGACTCGGTCAACCAGACCTA ATCGAGCCTCAGGGTCTAAGAAAAAGAAGACATCTGAGTCACAAAAGCAATAAGCAGTCAACTCAACCTTTAAAGTAATCTAGTCCACCC TCAACCAGCTACTAGAAAAGCAAAAGAGAACTCAAATCCCTGAGGCCTGCTCTGCAACCTCCCTGCTATTCCATGAGAGGGTGAAGACAT CACATTTCTATATGGAAAAAGGATCCAAAATTTGTATTGCTGTAGAATTGGTGAATTATAGATGCTTGATGAAATCACAAGTCCTACCAC TCCTGCCTTCCAAATCCCTGCAGAAAACAAGCAGATGGTTAGTATTATTCAATGGATAAAATTGCTATTTGCCTTAGATTTCTCTTTTTG TAAACAAAGTTATTTTGGGTACAGAACTCACAAAAGAAGAGCACGTGCAATTGTTTAACCATTTTACATTGACTGATAAATCTCTTTTTT >In-frame_SOX5_ENST00000545921_chr12_23793746_-_IFLTD1_ENST00000282881_chr12_25702480_-_2685nt AGTAGGAGTGGAGAGCGTGCGTGAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGCGTGTGTGAAGAATGCACACTATCTCCTGTT GGTAAGTGTGTGCTTACTCCCTGACCAGATGCTGCGGTGCACGGGGCAGCCACCATCTCTGCATGCATGTCTGTGATGTCTTCCAAGCGA CCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCA GCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGT GGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACC TCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGT TTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTA CTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAGGGACTCCCGAGAGCTTAGCTGAGAAA GAAAGGCAACTCATGGGTATGATCAACCAGCTGACCAGCCTCCGAGAGCAGCTGTTGGCTGCCCACGATGAGCAGAAGAAACTAGCTGCC TCTCAGATTGAGAAACAGCGTCAGCAAATGGAGCTGGCCAAGCAGCAACAAGAACAAATTGCAAGACAGCAGCAGCAGCTTCTACAGCAA CAACACAAAATCAATTTGCTCCAGCAACAGATCCAGGTTCAAGGTCAGCTGCCGCCATTAATGATTCCCGTATTCCCTCCTGATCAACGG ACACTGGCTGCAGCTGCCCAGCAAGGATTCCTCCTCCCTCCAGGCTTCAGCTATAAGGCTGGATGTAGTGACCCTTACCCTGTTCAGCTG ATCCCAACTACCATGGCAGCTGCTGCCGCAGCAACACCAGGCTTAGGCCCACTCCAACTGCAGAAGAGAAGACAAACTTGGAGTATATTC TTTAGTACATTTTTCCCCAAAGATGTTGGGTTCAGTTGCCACAACACTGCCATTGTCATCTTCAAATTCCAGTGGAATGCCTCTTGGTTA CTATCTGTCTAGTCCTCAGATTAGTAGAGTAACTATATCAACAACTGGACAATTGACTTCTAAAGCTACTGTAGGTAGCTGTTCCAGAGT GGAAAACAGCTTGGATGCCAGCCCCTTCTCAGTTCCGAAGAAACAGGATGAATCACCCATGATTGGGGATGGAGAAGATTATTTCCTTTC TTTGTTTGGTGATTCAAAGAAACTTACAGCACACTCAAACTACACTCAGAAAACTTTAAAATACTTTTCTATGATTCTTGAAGAAGTTGG CCAATTTACCTCCAGTTCTCTTGGAGATGTTGAAATAGCTGAAGTGAATGTCAAGGGTTTGTTCGTGAAGCTCATTAACTCTTCCCTTGA CAAAGAAATGGCAATTGGAGATCATATTCTCCAGCAAAATGTGAATGGACAAACCATTTCTTTGTACCGATTCCTTCCAAACATCGTAAT GCAGGCAAATTCCACAGTAACAGTGTGGGCAGCAGCATCTGAAGCAAAGCATCAACCTCCATCAGATTTTCTTTGGAAGGAACAAGACAA GTTTAGAGCAAGTCCTGATTGTATAACAATCCTGTGCAAACCGAACGGTCAAGCCATTGCGTGGTACACCCCTATCCACTGGAAGCAAGC GTGGGAAAAATTAGATGCTGACGTTGAATTTAACAGATGTTCAGTAGTATCTCCAACATTCCGAAAGCGTGTGTTTCAGTGGACAGCATC TACAGCTACAATAACTAAAGAAAAACAAGATCAACCTAAGAAAGATATCTCAAATTATCAGGTGGAACAAGCTCAAGTTCTTCTTAAGAG AGAGAAGGAAATCCCACCAACCGTTTTCCCTAATCGCAGCCCTTGGTGCCAGAATCCCTATGTCTCTGCACATCCTTACTGTCCTCTGAT TGAACCACACAATACATCCACCGCTGGAGGCAGATTGGATAGACAGCCCAGGACTCGGTCAACCAGACCTAATCGAGCCTCAGGGTCTAA GAAAAAGAAGACATCTGAGTCACAAAAGCAATAAGCAGTCAACTCAACCTTTAAAGTAATCTAGTCCACCCTCAACCAGCTACTAGAAAA GCAAAAGAGAACTCAAATCCCTGAGGCCTGCTCTGCAACCTCCCTGCTATTCCATGAGAGGGTGAAGACATCACATTTCTATATGGAAAA AGGATCCAAAATTTGTATTGCTGTAGAATTGGTGAATTATAGATGCTTGATGAAATCACAAGTCCTACCACTCCTGCCTTCCAAATCCCT GCAGAAAACAAGCAGATGGTTAGTATTATTCAATGGATAAAATTGCTATTTGCCTTAGATTTCTCTTTTTGTAAACAAAGTTATTTTGGG |
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FusionGenePPI for SOX5_IFLTD1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| SOX5 | SOX2, APP, CDK6, SMAD7, SMAD1, SMAD5, FTH1, CDC25A, RPS2, TTC1, UQCRFS1, MED27, TAF6, AES, CRX, KIFC3, LMO1, LMO2, SOX5, CDC23, KAT5, ARID5A, ZNF581, CBX8, FAM46B, PRR20A, MORN3, SUMO1P1, CEP85, SOX6, SOX13, SOX1, ANKRD40, SOX11 | IFLTD1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SOX5_IFLTD1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SOX5_IFLTD1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | SOX5 | C0004238 | Atrial Fibrillation | 1 | CTD_human |
| Hgene | SOX5 | C0036341 | Schizophrenia | 1 | PSYGENET |
| Hgene | SOX5 | C1510586 | Autism Spectrum Disorders | 1 | CTD_human |
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