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Fusion gene ID: 3543 |
FusionGeneSummary for ATRX_ARHGEF9 |
Fusion gene summary |
Fusion gene information | Fusion gene name: ATRX_ARHGEF9 | Fusion gene ID: 3543 | Hgene | Tgene | Gene symbol | ATRX | ARHGEF9 | Gene ID | 546 | 23229 |
Gene name | ATRX, chromatin remodeler | Cdc42 guanine nucleotide exchange factor 9 | |
Synonyms | JMS|MRX52|RAD54|RAD54L|XH2|XNP|ZNF-HX | COLLYBISTIN|EIEE8|HPEM-2|PEM-2|PEM2 | |
Cytomap | Xq21.1 | Xq11.1 | |
Type of gene | protein-coding | protein-coding | |
Description | transcriptional regulator ATRXATP-dependent helicase ATRXX-linked helicase IIX-linked nuclear proteinalpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae) | rho guanine nucleotide exchange factor 9Cdc42 guanine nucleotide exchange factor (GEF) 9PEM-2 homologhPEM-2 collybistinrac/Cdc42 guanine nucleotide exchange factor 9 | |
Modification date | 20180519 | 20180519 | |
UniProtAcc | P46100 | O43307 | |
Ensembl transtripts involved in fusion gene | ENST00000373344, ENST00000395603, ENST00000480283, ENST00000373341, | ENST00000253401, ENST00000374878, ENST00000374870, ENST00000437457, ENST00000495564, ENST00000374872, ENST00000433323, | |
Fusion gene scores | * DoF score | 9 X 4 X 6=216 | 1 X 1 X 1=1 |
# samples | 9 | 1 | |
** MAII score | log2(9/216*10)=-1.26303440583379 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | log2(1/1*10)=3.32192809488736 | |
Context | PubMed: ATRX [Title/Abstract] AND ARHGEF9 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | ATRX | GO:0006334 | nucleosome assembly | 20651253 |
Hgene | ATRX | GO:0006338 | chromatin remodeling | 20651253 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | MESO | TCGA-MQ-A4LP-01A | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000373344 | ENST00000253401 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000373344 | ENST00000374878 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000373344 | ENST00000374870 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000373344 | ENST00000437457 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5CDS-5UTR | ENST00000373344 | ENST00000495564 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5CDS-5UTR | ENST00000373344 | ENST00000374872 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5CDS-5UTR | ENST00000373344 | ENST00000433323 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000395603 | ENST00000253401 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000395603 | ENST00000374878 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000395603 | ENST00000374870 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
In-frame | ENST00000395603 | ENST00000437457 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5CDS-5UTR | ENST00000395603 | ENST00000495564 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5CDS-5UTR | ENST00000395603 | ENST00000374872 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5CDS-5UTR | ENST00000395603 | ENST00000433323 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-3CDS | ENST00000480283 | ENST00000253401 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-3CDS | ENST00000480283 | ENST00000374878 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-3CDS | ENST00000480283 | ENST00000374870 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-3CDS | ENST00000480283 | ENST00000437457 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-5UTR | ENST00000480283 | ENST00000495564 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-5UTR | ENST00000480283 | ENST00000374872 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
5UTR-5UTR | ENST00000480283 | ENST00000433323 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-3CDS | ENST00000373341 | ENST00000253401 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-3CDS | ENST00000373341 | ENST00000374878 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-3CDS | ENST00000373341 | ENST00000374870 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-3CDS | ENST00000373341 | ENST00000437457 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-5UTR | ENST00000373341 | ENST00000495564 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-5UTR | ENST00000373341 | ENST00000374872 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
intron-5UTR | ENST00000373341 | ENST00000433323 | ATRX | chrX | 77041468 | - | ARHGEF9 | chrX | 62875617 | - |
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FusionProtFeatures for ATRX_ARHGEF9 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
ATRX | ARHGEF9 |
Acts as guanine nucleotide exchange factor (GEF) forCDC42. Promotes formation of GPHN clusters.{ECO:0000269|PubMed:10559246}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Tgene | >ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000374870 | - | 5 | 9 | 318_425 | 250 | 415 | Domain | PH |
Tgene | >ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000437457 | - | 5 | 9 | 318_425 | 299 | 464 | Domain | PH |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1151_1156 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1166_1169 | 6 | 2493 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1202_1206 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1259_1266 | 6 | 2493 | Compositional bias | Note=Poly-Asp |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1443_1466 | 6 | 2493 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1499_1502 | 6 | 2493 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1929_1939 | 6 | 2493 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1941_1948 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 2222_2225 | 6 | 2493 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 2262_2265 | 6 | 2493 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 2420_2425 | 6 | 2493 | Compositional bias | Note=Poly-Gln |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 745_750 | 6 | 2493 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1151_1156 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1166_1169 | 6 | 2455 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1202_1206 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1259_1266 | 6 | 2455 | Compositional bias | Note=Poly-Asp |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1443_1466 | 6 | 2455 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1499_1502 | 6 | 2455 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1929_1939 | 6 | 2455 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1941_1948 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 2222_2225 | 6 | 2455 | Compositional bias | Note=Poly-Lys |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 2262_2265 | 6 | 2455 | Compositional bias | Note=Poly-Glu |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 2420_2425 | 6 | 2455 | Compositional bias | Note=Poly-Gln |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 745_750 | 6 | 2455 | Compositional bias | Note=Poly-Ser |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1581_1768 | 6 | 2493 | Domain | Helicase ATP-binding |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 159_296 | 6 | 2493 | Domain | ADD |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 2025_2205 | 6 | 2493 | Domain | Helicase C-terminal |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1581_1768 | 6 | 2455 | Domain | Helicase ATP-binding |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 159_296 | 6 | 2455 | Domain | ADD |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 2025_2205 | 6 | 2455 | Domain | Helicase C-terminal |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1719_1722 | 6 | 2493 | Motif | Note=DEGH box |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 581_594 | 6 | 2493 | Motif | Note=PxVxL motif |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1719_1722 | 6 | 2455 | Motif | Note=DEGH box |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 581_594 | 6 | 2455 | Motif | Note=PxVxL motif |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1594_1601 | 6 | 2493 | Nucleotide binding | ATP |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1594_1601 | 6 | 2455 | Nucleotide binding | ATP |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 170_206 | 6 | 2493 | Zinc finger | GATA-type%3B atypical |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 217_272 | 6 | 2493 | Zinc finger | PHD-type%3B atypical |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 170_206 | 6 | 2455 | Zinc finger | GATA-type%3B atypical |
Hgene | >ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 217_272 | 6 | 2455 | Zinc finger | PHD-type%3B atypical |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000253401 | - | 6 | 10 | 103_287 | 352 | 517 | Domain | DH |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000253401 | - | 6 | 10 | 318_425 | 352 | 517 | Domain | PH |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000253401 | - | 6 | 10 | 8_67 | 352 | 517 | Domain | SH3 |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000374870 | - | 5 | 9 | 103_287 | 250 | 415 | Domain | DH |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000374870 | - | 5 | 9 | 8_67 | 250 | 415 | Domain | SH3 |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000437457 | - | 5 | 9 | 103_287 | 299 | 464 | Domain | DH |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000437457 | - | 5 | 9 | 8_67 | 299 | 464 | Domain | SH3 |
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FusionGeneSequence for ATRX_ARHGEF9 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000253401_chrX_62875617_-_171aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000374878_chrX_62875617_-_135aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000374870_chrX_62875617_-_171aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000437457_chrX_62875617_-_171aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000253401_chrX_62875617_-_171aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000374878_chrX_62875617_-_135aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000374870_chrX_62875617_-_171aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000437457_chrX_62875617_-_171aa MTAEPMRTXSGETSCTTKAALTWINMRXLTLRMAEMMTSMSAXRMPLSFTTRRLRRYICSLPRSWRKKYAGSGLSEKRGKWYRKMKKLAL |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000253401_chrX_62875617_-_515nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTC CTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCG >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000374878_chrX_62875617_-_407nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAACTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAA >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000374870_chrX_62875617_-_515nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTC CTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCG >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000437457_chrX_62875617_-_515nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTC CTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCG >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000253401_chrX_62875617_-_515nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTC CTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCG >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000374878_chrX_62875617_-_407nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAACTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000374870_chrX_62875617_-_515nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTC CTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCG >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000437457_chrX_62875617_-_515nt ATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACA TTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTGTTCT TTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTG AAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTC CTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCG |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000253401_chrX_62875617_-_3791nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAA GCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGA CGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTT CAAAAAATGATACCTACAGGGAGGCAGATAATTTTAAAATAAAGTAAATAAAATTATATTTATAGATGGACCTTTTTTCGGAGAAGCACT GTTGAAATTTATACACACACACACACACAGAGACCCTTGAGTACACATACACACACACACACACAGACACACACACACACACACACACAC ACACACACACAGAGAGATAAGGAACAAAAGTGTTTTCTGTTGTTTTGGGGAAGTGAAATATGTGGTTGGTAGGAAGAGGTACCAATGACT TCCAAACATGTGATTCCGTCTTAAAAGTTTTCCATTTTTACCCTGTCCCCCTTCCCTTTGCTTTCAGAAGTTGACATTTCTATTCATTGC TTTTCTTGTTAAGATAATCTCTTTACTCCCCTGTGAGTGATTCACTGCCTTGTCATTATTACGATAGATGTGTTTGTATTGTTTTTTTTC TGATGATACTGATGTTGATGAATTTTTAATTTTATTTGATGTGGTAGAGTTGGGAGGTTTCAGGGTTTTTTCCCCTCTTTTACTTTCCAT TGAGGAAGGGAATGAGCTCCTTTCTCCTCTCCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCCCCAAATAACCTTTT TTCAGCATCCTCTGTCCTCAGTCATGCCAGTCTGGACATGCTCTGTTGTGCCCTGTGACAAAACTGCTCAGTATTCCTATTGCTTTTACT GTGTTTTAGGTACTGTGAAGGGATCAAAAAACCAAACAGAAGCAAGGGAGTATCAGACTATGATGATGCTGGAGTGGACTTCTGTTCAGG GAACATTTTGCATTCAGGCTGTTTCTTCTATCACTGGGGTTTCCCATGTTGCAGCACTTCTGGGTCGTTGCAATTTTGCATCTAGGAGTT AGTTTGATCGAGTTATTCTCTTTTTTCAAGTCACTTTTGTTATAGGTCTCCCCCTAGGCCTGTCTCTCCCTTAGCCCAAAAGATCTGAAC TGGAAGCAGAGGTTGAGATTCTGCCTCCCAGGAGAGGGATTTACCTGCCCCCTAGTACCAGATAGGTTTAGGGCAGTGATCTCTACAGCA ATCAGTTCAGTGTCCTGGTTGTCCCTGCTCCCATTTACAGATGTTTGGGCAGCATTGATAGAAGTATGGAGGGGTTCAAGACAGAGCCCA CCTGATCAAGATCATCAGCTACCTTCAAATTATTGACCTGGACAGGGTCCAAGTCTGATAGTAACCTTTTACAAGAAAGAACAGGGATGG GAATGGAAAGAGATAGCCTTGATCCACAGTATTGTACCTGCATTTTCTACCACCCTAAAATTGTGTGAGACTTCTCCCATTGTTAACAGA TTGCATGGACAATCTTCCCTGGCTTCTTTCTTTCCCTCTCTCTTTCTTCTTTCTCCTGCCATCCTAGCACAGGAGGATTTTTGGTATTGA TATAGTTAAAGCTGTTCTGGCACTCAAAGAAGGCCGTGTTTCCAACATCCTCTCATCCCAGGACATTTGGGGCAAGTGAGTTAGGGGCCC AGGGGCAATTTTCCCTCTGAATAACGTGTCTGAGGCAGGGATGCTACCCTCAGGCTCGCTTTTGGCCAGCTTTTTGCTTGGGAAAATCTA ACTTCTTTCACAAGGAGGCAGGCTTCCTATGGATGTTGGAGTACCTGTTTTTCCTCCACACATAGCCCTTTTCATGGATAGACCTTGAAC AACAAAAAGGGTATAAGGGAATAAGGATGAACTCTGCTGTGAAGAGCAAGCCACTGTAGTGAGGAATGTGGAGACTGGGAGTCTGTCCTA AACCCCATGGGAGAAGACTTCATCATGACAGGACTTCAGCTTACCAAGCAGCAGCCATAGCTGTGTGGAGGCTTCAGCATAGCTAGCATG TTTACTGCTCTATGCCTCCTGATCCAGACCAGGCATTGCCCAGCCTGGGAATCTTTTCTTTGTGGGAATCAAATTACAAGCTATTTAAGT TTATATTCCATCACAACCAAGTCAGACTTGTATTATAAGTCAAGGATGAGCCTGATCTGGGGAGAGGGCCGGGGCTCGGGACTGGCCACC ACTGTTCAGCACATGACCTAACTACGTAAGCCTCTTTGGCAAGGGTCCTGGTGCCCAGCACCCAGGCTAAAATATCCTGTCTGGCAGAGT GTTTTGGTAGCTATGCAGGCCTCCCTTCAGTGTACCTCTTTTTCCAACTTCTCACTCCTCCTTACTAGGCTTGGCCTTGACATGCTTCTT CGAGGGTTGGCAGCACACCGGGAGGGGATGCTTGGACAAGTTTCTGGGCCTACATTTCTTGACTAGGCCCTCTCATTTCCTCCCTCCTTG GGGCTTCTGCCCAGGGCTCCAGGATCAGGGATATTACTTCTCAACCCGCACTTCTCCTCTACTGAACCCACTGGCATCACCTGATGCCAC TAATTTGTGAACAACAAGAAATCATTTCCCCATTGGTTGGAGTATTCCCTCAGCCTATAGCATCAAAGCAGACCAGTGGCCAACAGCCCC AAGGGGAGCCCAATTAAATACCTGGGTTCAGTATCCTAACCTGTTATGTCCTGACAGCAATGGTAACCCCAGTAATTCTGTAATGTTGTA ATTTCCGCATGGCCCTGAGCTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGAC CTGCTGTGGGGAGTCCTAAGACAGACATCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAAC AGCAACAAGAGAGTTCTAACAATTCTAGTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATG GGCAACAGTGACTTTGATTACCCTTGCTGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTG TCAAAGTTGTGTGTTAAAAAATGTTTAACAAAAAAAATGTTGTAATGACACAAAGCCTTATGAAAATATTTATGGAGTTCAATAAAAGAA >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000374878_chrX_62875617_-_974nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAACTCCCTTT TCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGACCTGCTGTGGGGAGTCCTAAGACAGACA TCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAACAGCAACAAGAGAGTTCTAACAATTCTA GTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATGGGCAACAGTGACTTTGATTACCCTTGC TGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTGTCAAAGTTGTGTGTTAAAAAATGTTTA >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000374870_chrX_62875617_-_3782nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAA GCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGA CGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTT CAAAAAATGATACCTACAGGGAGGCAGATAATTTTAAAATAAAGTAAATAAAATTATATTTATAGATGGACCTTTTTTCGGAGAAGCACT GTTGAAATTTATACACACACACACACACAGAGACCCTTGAGTACACATACACACACACACACACAGACACACACACACACACACACACAC ACACACACACAGAGAGATAAGGAACAAAAGTGTTTTCTGTTGTTTTGGGGAAGTGAAATATGTGGTTGGTAGGAAGAGGTACCAATGACT TCCAAACATGTGATTCCGTCTTAAAAGTTTTCCATTTTTACCCTGTCCCCCTTCCCTTTGCTTTCAGAAGTTGACATTTCTATTCATTGC TTTTCTTGTTAAGATAATCTCTTTACTCCCCTGTGAGTGATTCACTGCCTTGTCATTATTACGATAGATGTGTTTGTATTGTTTTTTTTC TGATGATACTGATGTTGATGAATTTTTAATTTTATTTGATGTGGTAGAGTTGGGAGGTTTCAGGGTTTTTTCCCCTCTTTTACTTTCCAT TGAGGAAGGGAATGAGCTCCTTTCTCCTCTCCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCCCCAAATAACCTTTT TTCAGCATCCTCTGTCCTCAGTCATGCCAGTCTGGACATGCTCTGTTGTGCCCTGTGACAAAACTGCTCAGTATTCCTATTGCTTTTACT GTGTTTTAGGTACTGTGAAGGGATCAAAAAACCAAACAGAAGCAAGGGAGTATCAGACTATGATGATGCTGGAGTGGACTTCTGTTCAGG GAACATTTTGCATTCAGGCTGTTTCTTCTATCACTGGGGTTTCCCATGTTGCAGCACTTCTGGGTCGTTGCAATTTTGCATCTAGGAGTT AGTTTGATCGAGTTATTCTCTTTTTTCAAGTCACTTTTGTTATAGGTCTCCCCCTAGGCCTGTCTCTCCCTTAGCCCAAAAGATCTGAAC TGGAAGCAGAGGTTGAGATTCTGCCTCCCAGGAGAGGGATTTACCTGCCCCCTAGTACCAGATAGGTTTAGGGCAGTGATCTCTACAGCA ATCAGTTCAGTGTCCTGGTTGTCCCTGCTCCCATTTACAGATGTTTGGGCAGCATTGATAGAAGTATGGAGGGGTTCAAGACAGAGCCCA CCTGATCAAGATCATCAGCTACCTTCAAATTATTGACCTGGACAGGGTCCAAGTCTGATAGTAACCTTTTACAAGAAAGAACAGGGATGG GAATGGAAAGAGATAGCCTTGATCCACAGTATTGTACCTGCATTTTCTACCACCCTAAAATTGTGTGAGACTTCTCCCATTGTTAACAGA TTGCATGGACAATCTTCCCTGGCTTCTTTCTTTCCCTCTCTCTTTCTTCTTTCTCCTGCCATCCTAGCACAGGAGGATTTTTGGTATTGA TATAGTTAAAGCTGTTCTGGCACTCAAAGAAGGCCGTGTTTCCAACATCCTCTCATCCCAGGACATTTGGGGCAAGTGAGTTAGGGGCCC AGGGGCAATTTTCCCTCTGAATAACGTGTCTGAGGCAGGGATGCTACCCTCAGGCTCGCTTTTGGCCAGCTTTTTGCTTGGGAAAATCTA ACTTCTTTCACAAGGAGGCAGGCTTCCTATGGATGTTGGAGTACCTGTTTTTCCTCCACACATAGCCCTTTTCATGGATAGACCTTGAAC AACAAAAAGGGTATAAGGGAATAAGGATGAACTCTGCTGTGAAGAGCAAGCCACTGTAGTGAGGAATGTGGAGACTGGGAGTCTGTCCTA AACCCCATGGGAGAAGACTTCATCATGACAGGACTTCAGCTTACCAAGCAGCAGCCATAGCTGTGTGGAGGCTTCAGCATAGCTAGCATG TTTACTGCTCTATGCCTCCTGATCCAGACCAGGCATTGCCCAGCCTGGGAATCTTTTCTTTGTGGGAATCAAATTACAAGCTATTTAAGT TTATATTCCATCACAACCAAGTCAGACTTGTATTATAAGTCAAGGATGAGCCTGATCTGGGGAGAGGGCCGGGGCTCGGGACTGGCCACC ACTGTTCAGCACATGACCTAACTACGTAAGCCTCTTTGGCAAGGGTCCTGGTGCCCAGCACCCAGGCTAAAATATCCTGTCTGGCAGAGT GTTTTGGTAGCTATGCAGGCCTCCCTTCAGTGTACCTCTTTTTCCAACTTCTCACTCCTCCTTACTAGGCTTGGCCTTGACATGCTTCTT CGAGGGTTGGCAGCACACCGGGAGGGGATGCTTGGACAAGTTTCTGGGCCTACATTTCTTGACTAGGCCCTCTCATTTCCTCCCTCCTTG GGGCTTCTGCCCAGGGCTCCAGGATCAGGGATATTACTTCTCAACCCGCACTTCTCCTCTACTGAACCCACTGGCATCACCTGATGCCAC TAATTTGTGAACAACAAGAAATCATTTCCCCATTGGTTGGAGTATTCCCTCAGCCTATAGCATCAAAGCAGACCAGTGGCCAACAGCCCC AAGGGGAGCCCAATTAAATACCTGGGTTCAGTATCCTAACCTGTTATGTCCTGACAGCAATGGTAACCCCAGTAATTCTGTAATGTTGTA ATTTCCGCATGGCCCTGAGCTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGAC CTGCTGTGGGGAGTCCTAAGACAGACATCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAAC AGCAACAAGAGAGTTCTAACAATTCTAGTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATG GGCAACAGTGACTTTGATTACCCTTGCTGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTG TCAAAGTTGTGTGTTAAAAAATGTTTAACAAAAAAAATGTTGTAATGACACAAAGCCTTATGAAAATATTTATGGAGTTCAATAAAAGAA >In-frame_ATRX_ENST00000373344_chrX_77041468_-_ARHGEF9_ENST00000437457_chrX_62875617_-_3782nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAA GCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGA CGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTT CAAAAAATGATACCTACAGGGAGGCAGATAATTTTAAAATAAAGTAAATAAAATTATATTTATAGATGGACCTTTTTTCGGAGAAGCACT GTTGAAATTTATACACACACACACACACAGAGACCCTTGAGTACACATACACACACACACACACAGACACACACACACACACACACACAC ACACACACACAGAGAGATAAGGAACAAAAGTGTTTTCTGTTGTTTTGGGGAAGTGAAATATGTGGTTGGTAGGAAGAGGTACCAATGACT TCCAAACATGTGATTCCGTCTTAAAAGTTTTCCATTTTTACCCTGTCCCCCTTCCCTTTGCTTTCAGAAGTTGACATTTCTATTCATTGC TTTTCTTGTTAAGATAATCTCTTTACTCCCCTGTGAGTGATTCACTGCCTTGTCATTATTACGATAGATGTGTTTGTATTGTTTTTTTTC TGATGATACTGATGTTGATGAATTTTTAATTTTATTTGATGTGGTAGAGTTGGGAGGTTTCAGGGTTTTTTCCCCTCTTTTACTTTCCAT TGAGGAAGGGAATGAGCTCCTTTCTCCTCTCCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCCCCAAATAACCTTTT TTCAGCATCCTCTGTCCTCAGTCATGCCAGTCTGGACATGCTCTGTTGTGCCCTGTGACAAAACTGCTCAGTATTCCTATTGCTTTTACT GTGTTTTAGGTACTGTGAAGGGATCAAAAAACCAAACAGAAGCAAGGGAGTATCAGACTATGATGATGCTGGAGTGGACTTCTGTTCAGG GAACATTTTGCATTCAGGCTGTTTCTTCTATCACTGGGGTTTCCCATGTTGCAGCACTTCTGGGTCGTTGCAATTTTGCATCTAGGAGTT AGTTTGATCGAGTTATTCTCTTTTTTCAAGTCACTTTTGTTATAGGTCTCCCCCTAGGCCTGTCTCTCCCTTAGCCCAAAAGATCTGAAC TGGAAGCAGAGGTTGAGATTCTGCCTCCCAGGAGAGGGATTTACCTGCCCCCTAGTACCAGATAGGTTTAGGGCAGTGATCTCTACAGCA ATCAGTTCAGTGTCCTGGTTGTCCCTGCTCCCATTTACAGATGTTTGGGCAGCATTGATAGAAGTATGGAGGGGTTCAAGACAGAGCCCA CCTGATCAAGATCATCAGCTACCTTCAAATTATTGACCTGGACAGGGTCCAAGTCTGATAGTAACCTTTTACAAGAAAGAACAGGGATGG GAATGGAAAGAGATAGCCTTGATCCACAGTATTGTACCTGCATTTTCTACCACCCTAAAATTGTGTGAGACTTCTCCCATTGTTAACAGA TTGCATGGACAATCTTCCCTGGCTTCTTTCTTTCCCTCTCTCTTTCTTCTTTCTCCTGCCATCCTAGCACAGGAGGATTTTTGGTATTGA TATAGTTAAAGCTGTTCTGGCACTCAAAGAAGGCCGTGTTTCCAACATCCTCTCATCCCAGGACATTTGGGGCAAGTGAGTTAGGGGCCC AGGGGCAATTTTCCCTCTGAATAACGTGTCTGAGGCAGGGATGCTACCCTCAGGCTCGCTTTTGGCCAGCTTTTTGCTTGGGAAAATCTA ACTTCTTTCACAAGGAGGCAGGCTTCCTATGGATGTTGGAGTACCTGTTTTTCCTCCACACATAGCCCTTTTCATGGATAGACCTTGAAC AACAAAAAGGGTATAAGGGAATAAGGATGAACTCTGCTGTGAAGAGCAAGCCACTGTAGTGAGGAATGTGGAGACTGGGAGTCTGTCCTA AACCCCATGGGAGAAGACTTCATCATGACAGGACTTCAGCTTACCAAGCAGCAGCCATAGCTGTGTGGAGGCTTCAGCATAGCTAGCATG TTTACTGCTCTATGCCTCCTGATCCAGACCAGGCATTGCCCAGCCTGGGAATCTTTTCTTTGTGGGAATCAAATTACAAGCTATTTAAGT TTATATTCCATCACAACCAAGTCAGACTTGTATTATAAGTCAAGGATGAGCCTGATCTGGGGAGAGGGCCGGGGCTCGGGACTGGCCACC ACTGTTCAGCACATGACCTAACTACGTAAGCCTCTTTGGCAAGGGTCCTGGTGCCCAGCACCCAGGCTAAAATATCCTGTCTGGCAGAGT GTTTTGGTAGCTATGCAGGCCTCCCTTCAGTGTACCTCTTTTTCCAACTTCTCACTCCTCCTTACTAGGCTTGGCCTTGACATGCTTCTT CGAGGGTTGGCAGCACACCGGGAGGGGATGCTTGGACAAGTTTCTGGGCCTACATTTCTTGACTAGGCCCTCTCATTTCCTCCCTCCTTG GGGCTTCTGCCCAGGGCTCCAGGATCAGGGATATTACTTCTCAACCCGCACTTCTCCTCTACTGAACCCACTGGCATCACCTGATGCCAC TAATTTGTGAACAACAAGAAATCATTTCCCCATTGGTTGGAGTATTCCCTCAGCCTATAGCATCAAAGCAGACCAGTGGCCAACAGCCCC AAGGGGAGCCCAATTAAATACCTGGGTTCAGTATCCTAACCTGTTATGTCCTGACAGCAATGGTAACCCCAGTAATTCTGTAATGTTGTA ATTTCCGCATGGCCCTGAGCTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGAC CTGCTGTGGGGAGTCCTAAGACAGACATCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAAC AGCAACAAGAGAGTTCTAACAATTCTAGTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATG GGCAACAGTGACTTTGATTACCCTTGCTGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTG TCAAAGTTGTGTGTTAAAAAATGTTTAACAAAAAAAATGTTGTAATGACACAAAGCCTTATGAAAATATTTATGGAGTTCAATAAAAGAA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000253401_chrX_62875617_-_3791nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAA GCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGA CGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTT CAAAAAATGATACCTACAGGGAGGCAGATAATTTTAAAATAAAGTAAATAAAATTATATTTATAGATGGACCTTTTTTCGGAGAAGCACT GTTGAAATTTATACACACACACACACACAGAGACCCTTGAGTACACATACACACACACACACACAGACACACACACACACACACACACAC ACACACACACAGAGAGATAAGGAACAAAAGTGTTTTCTGTTGTTTTGGGGAAGTGAAATATGTGGTTGGTAGGAAGAGGTACCAATGACT TCCAAACATGTGATTCCGTCTTAAAAGTTTTCCATTTTTACCCTGTCCCCCTTCCCTTTGCTTTCAGAAGTTGACATTTCTATTCATTGC TTTTCTTGTTAAGATAATCTCTTTACTCCCCTGTGAGTGATTCACTGCCTTGTCATTATTACGATAGATGTGTTTGTATTGTTTTTTTTC TGATGATACTGATGTTGATGAATTTTTAATTTTATTTGATGTGGTAGAGTTGGGAGGTTTCAGGGTTTTTTCCCCTCTTTTACTTTCCAT TGAGGAAGGGAATGAGCTCCTTTCTCCTCTCCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCCCCAAATAACCTTTT TTCAGCATCCTCTGTCCTCAGTCATGCCAGTCTGGACATGCTCTGTTGTGCCCTGTGACAAAACTGCTCAGTATTCCTATTGCTTTTACT GTGTTTTAGGTACTGTGAAGGGATCAAAAAACCAAACAGAAGCAAGGGAGTATCAGACTATGATGATGCTGGAGTGGACTTCTGTTCAGG GAACATTTTGCATTCAGGCTGTTTCTTCTATCACTGGGGTTTCCCATGTTGCAGCACTTCTGGGTCGTTGCAATTTTGCATCTAGGAGTT AGTTTGATCGAGTTATTCTCTTTTTTCAAGTCACTTTTGTTATAGGTCTCCCCCTAGGCCTGTCTCTCCCTTAGCCCAAAAGATCTGAAC TGGAAGCAGAGGTTGAGATTCTGCCTCCCAGGAGAGGGATTTACCTGCCCCCTAGTACCAGATAGGTTTAGGGCAGTGATCTCTACAGCA ATCAGTTCAGTGTCCTGGTTGTCCCTGCTCCCATTTACAGATGTTTGGGCAGCATTGATAGAAGTATGGAGGGGTTCAAGACAGAGCCCA CCTGATCAAGATCATCAGCTACCTTCAAATTATTGACCTGGACAGGGTCCAAGTCTGATAGTAACCTTTTACAAGAAAGAACAGGGATGG GAATGGAAAGAGATAGCCTTGATCCACAGTATTGTACCTGCATTTTCTACCACCCTAAAATTGTGTGAGACTTCTCCCATTGTTAACAGA TTGCATGGACAATCTTCCCTGGCTTCTTTCTTTCCCTCTCTCTTTCTTCTTTCTCCTGCCATCCTAGCACAGGAGGATTTTTGGTATTGA TATAGTTAAAGCTGTTCTGGCACTCAAAGAAGGCCGTGTTTCCAACATCCTCTCATCCCAGGACATTTGGGGCAAGTGAGTTAGGGGCCC AGGGGCAATTTTCCCTCTGAATAACGTGTCTGAGGCAGGGATGCTACCCTCAGGCTCGCTTTTGGCCAGCTTTTTGCTTGGGAAAATCTA ACTTCTTTCACAAGGAGGCAGGCTTCCTATGGATGTTGGAGTACCTGTTTTTCCTCCACACATAGCCCTTTTCATGGATAGACCTTGAAC AACAAAAAGGGTATAAGGGAATAAGGATGAACTCTGCTGTGAAGAGCAAGCCACTGTAGTGAGGAATGTGGAGACTGGGAGTCTGTCCTA AACCCCATGGGAGAAGACTTCATCATGACAGGACTTCAGCTTACCAAGCAGCAGCCATAGCTGTGTGGAGGCTTCAGCATAGCTAGCATG TTTACTGCTCTATGCCTCCTGATCCAGACCAGGCATTGCCCAGCCTGGGAATCTTTTCTTTGTGGGAATCAAATTACAAGCTATTTAAGT TTATATTCCATCACAACCAAGTCAGACTTGTATTATAAGTCAAGGATGAGCCTGATCTGGGGAGAGGGCCGGGGCTCGGGACTGGCCACC ACTGTTCAGCACATGACCTAACTACGTAAGCCTCTTTGGCAAGGGTCCTGGTGCCCAGCACCCAGGCTAAAATATCCTGTCTGGCAGAGT GTTTTGGTAGCTATGCAGGCCTCCCTTCAGTGTACCTCTTTTTCCAACTTCTCACTCCTCCTTACTAGGCTTGGCCTTGACATGCTTCTT CGAGGGTTGGCAGCACACCGGGAGGGGATGCTTGGACAAGTTTCTGGGCCTACATTTCTTGACTAGGCCCTCTCATTTCCTCCCTCCTTG GGGCTTCTGCCCAGGGCTCCAGGATCAGGGATATTACTTCTCAACCCGCACTTCTCCTCTACTGAACCCACTGGCATCACCTGATGCCAC TAATTTGTGAACAACAAGAAATCATTTCCCCATTGGTTGGAGTATTCCCTCAGCCTATAGCATCAAAGCAGACCAGTGGCCAACAGCCCC AAGGGGAGCCCAATTAAATACCTGGGTTCAGTATCCTAACCTGTTATGTCCTGACAGCAATGGTAACCCCAGTAATTCTGTAATGTTGTA ATTTCCGCATGGCCCTGAGCTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGAC CTGCTGTGGGGAGTCCTAAGACAGACATCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAAC AGCAACAAGAGAGTTCTAACAATTCTAGTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATG GGCAACAGTGACTTTGATTACCCTTGCTGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTG TCAAAGTTGTGTGTTAAAAAATGTTTAACAAAAAAAATGTTGTAATGACACAAAGCCTTATGAAAATATTTATGGAGTTCAATAAAAGAA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000374878_chrX_62875617_-_974nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAACTCCCTTT TCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGACCTGCTGTGGGGAGTCCTAAGACAGACA TCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAACAGCAACAAGAGAGTTCTAACAATTCTA GTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATGGGCAACAGTGACTTTGATTACCCTTGC TGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTGTCAAAGTTGTGTGTTAAAAAATGTTTA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000374870_chrX_62875617_-_3782nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAA GCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGA CGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTT CAAAAAATGATACCTACAGGGAGGCAGATAATTTTAAAATAAAGTAAATAAAATTATATTTATAGATGGACCTTTTTTCGGAGAAGCACT GTTGAAATTTATACACACACACACACACAGAGACCCTTGAGTACACATACACACACACACACACAGACACACACACACACACACACACAC ACACACACACAGAGAGATAAGGAACAAAAGTGTTTTCTGTTGTTTTGGGGAAGTGAAATATGTGGTTGGTAGGAAGAGGTACCAATGACT TCCAAACATGTGATTCCGTCTTAAAAGTTTTCCATTTTTACCCTGTCCCCCTTCCCTTTGCTTTCAGAAGTTGACATTTCTATTCATTGC TTTTCTTGTTAAGATAATCTCTTTACTCCCCTGTGAGTGATTCACTGCCTTGTCATTATTACGATAGATGTGTTTGTATTGTTTTTTTTC TGATGATACTGATGTTGATGAATTTTTAATTTTATTTGATGTGGTAGAGTTGGGAGGTTTCAGGGTTTTTTCCCCTCTTTTACTTTCCAT TGAGGAAGGGAATGAGCTCCTTTCTCCTCTCCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCCCCAAATAACCTTTT TTCAGCATCCTCTGTCCTCAGTCATGCCAGTCTGGACATGCTCTGTTGTGCCCTGTGACAAAACTGCTCAGTATTCCTATTGCTTTTACT GTGTTTTAGGTACTGTGAAGGGATCAAAAAACCAAACAGAAGCAAGGGAGTATCAGACTATGATGATGCTGGAGTGGACTTCTGTTCAGG GAACATTTTGCATTCAGGCTGTTTCTTCTATCACTGGGGTTTCCCATGTTGCAGCACTTCTGGGTCGTTGCAATTTTGCATCTAGGAGTT AGTTTGATCGAGTTATTCTCTTTTTTCAAGTCACTTTTGTTATAGGTCTCCCCCTAGGCCTGTCTCTCCCTTAGCCCAAAAGATCTGAAC TGGAAGCAGAGGTTGAGATTCTGCCTCCCAGGAGAGGGATTTACCTGCCCCCTAGTACCAGATAGGTTTAGGGCAGTGATCTCTACAGCA ATCAGTTCAGTGTCCTGGTTGTCCCTGCTCCCATTTACAGATGTTTGGGCAGCATTGATAGAAGTATGGAGGGGTTCAAGACAGAGCCCA CCTGATCAAGATCATCAGCTACCTTCAAATTATTGACCTGGACAGGGTCCAAGTCTGATAGTAACCTTTTACAAGAAAGAACAGGGATGG GAATGGAAAGAGATAGCCTTGATCCACAGTATTGTACCTGCATTTTCTACCACCCTAAAATTGTGTGAGACTTCTCCCATTGTTAACAGA TTGCATGGACAATCTTCCCTGGCTTCTTTCTTTCCCTCTCTCTTTCTTCTTTCTCCTGCCATCCTAGCACAGGAGGATTTTTGGTATTGA TATAGTTAAAGCTGTTCTGGCACTCAAAGAAGGCCGTGTTTCCAACATCCTCTCATCCCAGGACATTTGGGGCAAGTGAGTTAGGGGCCC AGGGGCAATTTTCCCTCTGAATAACGTGTCTGAGGCAGGGATGCTACCCTCAGGCTCGCTTTTGGCCAGCTTTTTGCTTGGGAAAATCTA ACTTCTTTCACAAGGAGGCAGGCTTCCTATGGATGTTGGAGTACCTGTTTTTCCTCCACACATAGCCCTTTTCATGGATAGACCTTGAAC AACAAAAAGGGTATAAGGGAATAAGGATGAACTCTGCTGTGAAGAGCAAGCCACTGTAGTGAGGAATGTGGAGACTGGGAGTCTGTCCTA AACCCCATGGGAGAAGACTTCATCATGACAGGACTTCAGCTTACCAAGCAGCAGCCATAGCTGTGTGGAGGCTTCAGCATAGCTAGCATG TTTACTGCTCTATGCCTCCTGATCCAGACCAGGCATTGCCCAGCCTGGGAATCTTTTCTTTGTGGGAATCAAATTACAAGCTATTTAAGT TTATATTCCATCACAACCAAGTCAGACTTGTATTATAAGTCAAGGATGAGCCTGATCTGGGGAGAGGGCCGGGGCTCGGGACTGGCCACC ACTGTTCAGCACATGACCTAACTACGTAAGCCTCTTTGGCAAGGGTCCTGGTGCCCAGCACCCAGGCTAAAATATCCTGTCTGGCAGAGT GTTTTGGTAGCTATGCAGGCCTCCCTTCAGTGTACCTCTTTTTCCAACTTCTCACTCCTCCTTACTAGGCTTGGCCTTGACATGCTTCTT CGAGGGTTGGCAGCACACCGGGAGGGGATGCTTGGACAAGTTTCTGGGCCTACATTTCTTGACTAGGCCCTCTCATTTCCTCCCTCCTTG GGGCTTCTGCCCAGGGCTCCAGGATCAGGGATATTACTTCTCAACCCGCACTTCTCCTCTACTGAACCCACTGGCATCACCTGATGCCAC TAATTTGTGAACAACAAGAAATCATTTCCCCATTGGTTGGAGTATTCCCTCAGCCTATAGCATCAAAGCAGACCAGTGGCCAACAGCCCC AAGGGGAGCCCAATTAAATACCTGGGTTCAGTATCCTAACCTGTTATGTCCTGACAGCAATGGTAACCCCAGTAATTCTGTAATGTTGTA ATTTCCGCATGGCCCTGAGCTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGAC CTGCTGTGGGGAGTCCTAAGACAGACATCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAAC AGCAACAAGAGAGTTCTAACAATTCTAGTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATG GGCAACAGTGACTTTGATTACCCTTGCTGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTG TCAAAGTTGTGTGTTAAAAAATGTTTAACAAAAAAAATGTTGTAATGACACAAAGCCTTATGAAAATATTTATGGAGTTCAATAAAAGAA >In-frame_ATRX_ENST00000395603_chrX_77041468_-_ARHGEF9_ENST00000437457_chrX_62875617_-_3782nt CTCGGCCCAACAAAATGGCGGCGGCAGCGGTGTCGCTTTGTTTCCGCGGCTCCTGCGGCGGTGGCAGTGGTAGCGGCCTTTGAGCTGTGG GGAGGTTCCAGCAGCAGCTACAGTGACGACTAAGACTCCAGTGCATTTCTATCGTAACCGGGCGCGGGGGAGCGCAGATCGGCGCCCAGC AATCACAGAAGCCGACAAGGCGTTCAAGCGAAAACATGACCGCTGAGCCCATGAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGG CCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCT TCACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAG GAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAA GCAAAAAGGTGTCAACTCTGCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGA CGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTT CAAAAAATGATACCTACAGGGAGGCAGATAATTTTAAAATAAAGTAAATAAAATTATATTTATAGATGGACCTTTTTTCGGAGAAGCACT GTTGAAATTTATACACACACACACACACAGAGACCCTTGAGTACACATACACACACACACACACAGACACACACACACACACACACACAC ACACACACACAGAGAGATAAGGAACAAAAGTGTTTTCTGTTGTTTTGGGGAAGTGAAATATGTGGTTGGTAGGAAGAGGTACCAATGACT TCCAAACATGTGATTCCGTCTTAAAAGTTTTCCATTTTTACCCTGTCCCCCTTCCCTTTGCTTTCAGAAGTTGACATTTCTATTCATTGC TTTTCTTGTTAAGATAATCTCTTTACTCCCCTGTGAGTGATTCACTGCCTTGTCATTATTACGATAGATGTGTTTGTATTGTTTTTTTTC TGATGATACTGATGTTGATGAATTTTTAATTTTATTTGATGTGGTAGAGTTGGGAGGTTTCAGGGTTTTTTCCCCTCTTTTACTTTCCAT TGAGGAAGGGAATGAGCTCCTTTCTCCTCTCCTTCAGCCAATCATTATCAAATGTTCCTTCAGCCCTGCAGTTGCCCCAAATAACCTTTT TTCAGCATCCTCTGTCCTCAGTCATGCCAGTCTGGACATGCTCTGTTGTGCCCTGTGACAAAACTGCTCAGTATTCCTATTGCTTTTACT GTGTTTTAGGTACTGTGAAGGGATCAAAAAACCAAACAGAAGCAAGGGAGTATCAGACTATGATGATGCTGGAGTGGACTTCTGTTCAGG GAACATTTTGCATTCAGGCTGTTTCTTCTATCACTGGGGTTTCCCATGTTGCAGCACTTCTGGGTCGTTGCAATTTTGCATCTAGGAGTT AGTTTGATCGAGTTATTCTCTTTTTTCAAGTCACTTTTGTTATAGGTCTCCCCCTAGGCCTGTCTCTCCCTTAGCCCAAAAGATCTGAAC TGGAAGCAGAGGTTGAGATTCTGCCTCCCAGGAGAGGGATTTACCTGCCCCCTAGTACCAGATAGGTTTAGGGCAGTGATCTCTACAGCA ATCAGTTCAGTGTCCTGGTTGTCCCTGCTCCCATTTACAGATGTTTGGGCAGCATTGATAGAAGTATGGAGGGGTTCAAGACAGAGCCCA CCTGATCAAGATCATCAGCTACCTTCAAATTATTGACCTGGACAGGGTCCAAGTCTGATAGTAACCTTTTACAAGAAAGAACAGGGATGG GAATGGAAAGAGATAGCCTTGATCCACAGTATTGTACCTGCATTTTCTACCACCCTAAAATTGTGTGAGACTTCTCCCATTGTTAACAGA TTGCATGGACAATCTTCCCTGGCTTCTTTCTTTCCCTCTCTCTTTCTTCTTTCTCCTGCCATCCTAGCACAGGAGGATTTTTGGTATTGA TATAGTTAAAGCTGTTCTGGCACTCAAAGAAGGCCGTGTTTCCAACATCCTCTCATCCCAGGACATTTGGGGCAAGTGAGTTAGGGGCCC AGGGGCAATTTTCCCTCTGAATAACGTGTCTGAGGCAGGGATGCTACCCTCAGGCTCGCTTTTGGCCAGCTTTTTGCTTGGGAAAATCTA ACTTCTTTCACAAGGAGGCAGGCTTCCTATGGATGTTGGAGTACCTGTTTTTCCTCCACACATAGCCCTTTTCATGGATAGACCTTGAAC AACAAAAAGGGTATAAGGGAATAAGGATGAACTCTGCTGTGAAGAGCAAGCCACTGTAGTGAGGAATGTGGAGACTGGGAGTCTGTCCTA AACCCCATGGGAGAAGACTTCATCATGACAGGACTTCAGCTTACCAAGCAGCAGCCATAGCTGTGTGGAGGCTTCAGCATAGCTAGCATG TTTACTGCTCTATGCCTCCTGATCCAGACCAGGCATTGCCCAGCCTGGGAATCTTTTCTTTGTGGGAATCAAATTACAAGCTATTTAAGT TTATATTCCATCACAACCAAGTCAGACTTGTATTATAAGTCAAGGATGAGCCTGATCTGGGGAGAGGGCCGGGGCTCGGGACTGGCCACC ACTGTTCAGCACATGACCTAACTACGTAAGCCTCTTTGGCAAGGGTCCTGGTGCCCAGCACCCAGGCTAAAATATCCTGTCTGGCAGAGT GTTTTGGTAGCTATGCAGGCCTCCCTTCAGTGTACCTCTTTTTCCAACTTCTCACTCCTCCTTACTAGGCTTGGCCTTGACATGCTTCTT CGAGGGTTGGCAGCACACCGGGAGGGGATGCTTGGACAAGTTTCTGGGCCTACATTTCTTGACTAGGCCCTCTCATTTCCTCCCTCCTTG GGGCTTCTGCCCAGGGCTCCAGGATCAGGGATATTACTTCTCAACCCGCACTTCTCCTCTACTGAACCCACTGGCATCACCTGATGCCAC TAATTTGTGAACAACAAGAAATCATTTCCCCATTGGTTGGAGTATTCCCTCAGCCTATAGCATCAAAGCAGACCAGTGGCCAACAGCCCC AAGGGGAGCCCAATTAAATACCTGGGTTCAGTATCCTAACCTGTTATGTCCTGACAGCAATGGTAACCCCAGTAATTCTGTAATGTTGTA ATTTCCGCATGGCCCTGAGCTCCCTTTTCCTCAACTCAGTGAGGCCAGGATTTGCTCTCCAAAAGGCTTTGCTAGTGTGTTCAATGGGAC CTGCTGTGGGGAGTCCTAAGACAGACATCTAATTATTCTCTCTTTTTCCCCCCCTCTCTATGTGTATATTTCTAATGGATCTATAAGAAC AGCAACAAGAGAGTTCTAACAATTCTAGTGTGAAGCCAAATAGTGATCTTTTAGTGCTTTGGGGATGGGGTGGGCTGGGGTGGATGGATG GGCAACAGTGACTTTGATTACCCTTGCTGCTCTGCATTTGCCAGTTTATTCTTTTGTTTCTTTTATCTGACTGACTCTGTCAAACAAGTG TCAAAGTTGTGTGTTAAAAAATGTTTAACAAAAAAAATGTTGTAATGACACAAAGCCTTATGAAAATATTTATGGAGTTCAATAAAAGAA |
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FusionGenePPI for ATRX_ARHGEF9 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
ATRX | EIF4A2, EZH2, CCSER2, KIAA1377, LUC7L2, PTN, PTPN4, RAD51, SMC1A, CBX5, H3F3A, H3F3B, DAXX, HDAC4, HIST1H3A, WRN, CALM1, SVIL, ZBED1, HIST2H3C, BLM, NEK1, ZNF512B, PRKDC, RAD50, XRCC5, MRE11A, XRCC6, SUPT16H, NBN, SSRP1, HIST1H4J, HIST2H2BE, RPA1, TP53, HIST1H1C, RAD9A, HIST1H2BL, HIST1H2AB, RAD1, PML, NSD1, SUMO2, TMPO, CNOT1, LRRK2, H2AFY, SNW1, ZNF274, TRIM28, SETDB1, BMI1, AURKA, HIST1H4A, WDR1, EAF1, DDX20, NAF1, EIF2AK1, AP3B1, POLD1, RBM14, MFAP1 | ARHGEF9 | GPHN, SMURF1, PLEKHA5, KHDRBS1 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Hgene | ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 1189_1326 | 6 | 2493 | DAXX |
Hgene | ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 1189_1326 | 6 | 2455 | DAXX |
Hgene | ATRX | chrX:77041468 | chrX:62875617 | ENST00000373344 | - | 1 | 35 | 2010_2280 | 6 | 2493 | MECP2 |
Hgene | ATRX | chrX:77041468 | chrX:62875617 | ENST00000395603 | - | 1 | 34 | 2010_2280 | 6 | 2455 | MECP2 |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000253401 | - | 6 | 10 | 100_110 | 352 | 517 | GPHN |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000374870 | - | 5 | 9 | 100_110 | 250 | 415 | GPHN |
Tgene | ARHGEF9 | chrX:77041468 | chrX:62875617 | ENST00000437457 | - | 5 | 9 | 100_110 | 299 | 464 | GPHN |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for ATRX_ARHGEF9 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ATRX_ARHGEF9 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Hgene | ATRX | C1845055 | ALPHA-THALASSEMIA/MENTAL RETARDATION SYNDROME, NONDELETION TYPE, X-LINKED | 11 | CTD_human;ORPHANET;UNIPROT |
Hgene | ATRX | C0796003 | Juberg-Marsidi syndrome | 5 | CTD_human;ORPHANET;UNIPROT |
Hgene | ATRX | C0017638 | Glioma | 2 | CTD_human |
Hgene | ATRX | C0027819 | Neuroblastoma | 2 | CTD_human |
Hgene | ATRX | C0010417 | Cryptorchidism | 1 | CTD_human;HPO |
Hgene | ATRX | C0010606 | Adenoid Cystic Carcinoma | 1 | CTD_human |
Hgene | ATRX | C0018273 | Growth Disorders | 1 | CTD_human |
Hgene | ATRX | C0030297 | Pancreatic Neoplasm | 1 | CTD_human |
Hgene | ATRX | C0030846 | Penile Diseases | 1 | CTD_human |
Hgene | ATRX | C0039978 | Thoracic Diseases | 1 | CTD_human |
Hgene | ATRX | C0206754 | Neuroendocrine Tumors | 1 | CTD_human |
Hgene | ATRX | C0376634 | Craniofacial Abnormalities | 1 | CTD_human |
Hgene | ATRX | C1136249 | Mental Retardation, X-Linked | 1 | CTD_human |
Hgene | ATRX | C3463824 | MYELODYSPLASTIC SYNDROME | 1 | CTD_human;HPO |
Tgene | ARHGEF9 | C1845102 | Hyperekplexia and Epilepsy | 2 | CTD_human;ORPHANET;UNIPROT |
Tgene | ARHGEF9 | C1136249 | Mental Retardation, X-Linked | 1 | CTD_human |