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Fusion gene ID: 34272 |
FusionGeneSummary for SLC26A6_CYP2C8 |
Fusion gene summary |
Fusion gene information | Fusion gene name: SLC26A6_CYP2C8 | Fusion gene ID: 34272 | Hgene | Tgene | Gene symbol | SLC26A6 | CYP2C8 | Gene ID | 65010 | 1558 |
Gene name | solute carrier family 26 member 6 | cytochrome P450 family 2 subfamily C member 8 | |
Synonyms | - | CPC8|CYPIIC8|MP-12/MP-20 | |
Cytomap | 3p21.31 | 10q23.33 | |
Type of gene | protein-coding | protein-coding | |
Description | solute carrier family 26 member 6anion exchange transporteranion transporter 1pendrin L1solute carrier family 26 (anion exchanger), member 6sulfate anion transporter | cytochrome P450 2C8P450 form 1cytochrome P450 IIC2cytochrome P450 MP-12cytochrome P450 MP-20cytochrome P450 form 1cytochrome P450, family 2, subfamily C, polypeptide 8cytochrome P450, subfamily IIC (mephenytoin 4-hydroxylase), polypeptide 8flavopr | |
Modification date | 20180523 | 20180523 | |
UniProtAcc | Q9BXS9 | P10632 | |
Ensembl transtripts involved in fusion gene | ENST00000420764, ENST00000358747, ENST00000395550, ENST00000383733, ENST00000337000, ENST00000455886, ENST00000482282, | ENST00000371270, ENST00000535898, ENST00000539050, | |
Fusion gene scores | * DoF score | 1 X 1 X 1=1 | 2 X 2 X 2=8 |
# samples | 1 | 2 | |
** MAII score | log2(1/1*10)=3.32192809488736 | log2(2/8*10)=1.32192809488736 | |
Context | PubMed: SLC26A6 [Title/Abstract] AND CYP2C8 [Title/Abstract] AND fusion [Title/Abstract] | ||
Functional or gene categories assigned by FusionGDB annotation |
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Partner | Gene | GO ID | GO term | PubMed ID |
Hgene | SLC26A6 | GO:0071346 | cellular response to interferon-gamma | 18655181 |
Tgene | CYP2C8 | GO:0002933 | lipid hydroxylation | 14559847 |
Tgene | CYP2C8 | GO:0006082 | organic acid metabolic process | 19651758 |
Tgene | CYP2C8 | GO:0008202 | steroid metabolic process | 14559847 |
Tgene | CYP2C8 | GO:0017144 | drug metabolic process | 19651758 |
Tgene | CYP2C8 | GO:0042738 | exogenous drug catabolic process | 18619574 |
Tgene | CYP2C8 | GO:0055114 | oxidation-reduction process | 19651758 |
Tgene | CYP2C8 | GO:0070989 | oxidative demethylation | 18619574 |
Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
TCGA | RV | UCEC | TCGA-AJ-A3IA-01A | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
* LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
In-frame | ENST00000420764 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000420764 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
5CDS-intron | ENST00000420764 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
intron-3CDS | ENST00000358747 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
intron-3CDS | ENST00000358747 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
intron-intron | ENST00000358747 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000395550 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000395550 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
5CDS-intron | ENST00000395550 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000383733 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000383733 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
5CDS-intron | ENST00000383733 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000337000 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000337000 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
5CDS-intron | ENST00000337000 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000455886 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
In-frame | ENST00000455886 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
5CDS-intron | ENST00000455886 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
intron-3CDS | ENST00000482282 | ENST00000371270 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
intron-3CDS | ENST00000482282 | ENST00000535898 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
intron-intron | ENST00000482282 | ENST00000539050 | SLC26A6 | chr3 | 48672804 | - | CYP2C8 | chr10 | 96798795 | - |
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FusionProtFeatures for SLC26A6_CYP2C8 |
Main function of each fusion partner protein. (from UniProt) |
Hgene | Tgene |
SLC26A6 | CYP2C8 |
Apical membrane anion-exchanger with wide epithelialdistribution that plays a role as a component of the pH bufferingsystem for maintaining acid-base homeostasis. Acts as a versatileDIDS-sensitive inorganic and organic anion transporter thatmediates the uptake of monovalent anions like chloride,bicarbonate, formate and hydroxyl ion and divalent anions likesulfate and oxalate. Function in multiple exchange modes involvingpairs of these anions, which include chloride-bicarbonate,chloride-oxalate, oxalate-formate, oxalate-sulfate and chloride-formate exchange. Apical membrane chloride-bicarbonate exchangerthat mediates luminal chloride absorption and bicarbonatesecretion by the small intestinal brush border membrane andcontributes to intracellular pH regulation in the duodenal uppervillous epithelium during proton-coupled peptide absorption,possibly by providing a bicarbonate import pathway. Mediates alsointestinal chloride absorption and oxalate secretion, therebypreventing hyperoxaluria and calcium oxalate urolithiasis.Transepithelial oxalate secretion, chloride-formate, chloride-oxalate and chloride-bicarbonate transport activities in theduodenum are inhibited by PKC activation in a calcium-independentmanner. The apical membrane chloride-bicarbonate exchangerprovides also a major route for fluid and bicarbonate secretioninto the proximal tubules of the kidney as well as into theproximal part of the interlobular pancreatic ductal tree, where itmediates electrogenic chloride-bicarbonate exchange with achloride-bicarbonate stoichiometry of 1:2, and hence will diluteand alkalinize protein-rich acinar secretion. Mediates also thetranscellular sulfate absorption and oxalate secretion across theapical membrane in the duodenum and the formate ion efflux at theapical brush border of cells in the proximal tubules of kidney.Plays a role in sperm capacitation by increasing intracellular pH. Isoform 4: Apical membrane chloride-bicarbonateexchanger. Its association with carbonic anhydrase CA2 forms abicarbonate transport metabolon; hence maximizes the localconcentration of bicarbonate at the transporter site. | Cytochromes P450 are a group of heme-thiolatemonooxygenases. In liver microsomes, this enzyme is involved in anNADPH-dependent electron transport pathway. It oxidizes a varietyof structurally unrelated compounds, including steroids, fattyacids, and xenobiotics. In the epoxidation of arachidonic acid itgenerates only 14,15- and 11,12-cis-epoxyeicosatrienoic acids. Itis the principal enzyme responsible for the metabolism the anti-cancer drug paclitaxel (taxol). {ECO:0000269|PubMed:26427316,ECO:0000269|PubMed:7574697}. |
Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
- In-frame and retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
- In-frame and not-retained protein feature among the 13 regional features. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 530_742 | -84 | 739 | Domain | STAS |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 530_742 | 7 | 741 | Domain | STAS |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 530_742 | 7 | 760 | Domain | STAS |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 530_742 | 7 | 759 | Domain | STAS |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 137_186 | -84 | 739 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 1_115 | -84 | 739 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 208_263 | -84 | 739 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 285_293 | -84 | 739 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 315_347 | -84 | 739 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 369_379 | -84 | 739 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 401_416 | -84 | 739 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 438_484 | -84 | 739 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 506_759 | -84 | 739 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 137_186 | 7 | 741 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 1_115 | 7 | 741 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 208_263 | 7 | 741 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 285_293 | 7 | 741 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 315_347 | 7 | 741 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 369_379 | 7 | 741 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 401_416 | 7 | 741 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 438_484 | 7 | 741 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 506_759 | 7 | 741 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 137_186 | 7 | 760 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 1_115 | 7 | 760 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 208_263 | 7 | 760 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 285_293 | 7 | 760 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 315_347 | 7 | 760 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 369_379 | 7 | 760 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 401_416 | 7 | 760 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 438_484 | 7 | 760 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 506_759 | 7 | 760 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 137_186 | 7 | 759 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 1_115 | 7 | 759 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 208_263 | 7 | 759 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 285_293 | 7 | 759 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 315_347 | 7 | 759 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 369_379 | 7 | 759 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 401_416 | 7 | 759 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 438_484 | 7 | 759 | Topological domain | Extracellular |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 506_759 | 7 | 759 | Topological domain | Cytoplasmic |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 116_136 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 187_207 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 264_284 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 294_314 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 348_368 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 380_400 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 417_437 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000358747 | - | 1 | 20 | 485_505 | -84 | 739 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 116_136 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 187_207 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 264_284 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 294_314 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 348_368 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 380_400 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 417_437 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000383733 | - | 1 | 20 | 485_505 | 7 | 741 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 116_136 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 187_207 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 264_284 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 294_314 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 348_368 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 380_400 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 417_437 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000395550 | - | 1 | 21 | 485_505 | 7 | 760 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 116_136 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 187_207 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 264_284 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 294_314 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 348_368 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 380_400 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 417_437 | 7 | 759 | Transmembrane | Helical |
Hgene | >SLC26A6 | chr3:48672804 | chr10:96798795 | ENST00000420764 | - | 1 | 21 | 485_505 | 7 | 759 | Transmembrane | Helical |
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FusionGeneSequence for SLC26A6_CYP2C8 |
For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
* Fusion amino acid sequences. |
>In-frame_SLC26A6_ENST00000420764_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000420764_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000395550_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000395550_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000383733_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000383733_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000337000_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000337000_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000455886_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR >In-frame_SLC26A6_ENST00000455886_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_115aa MGLADASGAQPXWHYXLPCYMMTKNFLIQISLTLATFXIRMATLRKVTTSCLSQQENEFVQEKDLPAWSYFYFXPQFYRTLTXNLLMIXR |
* Fusion transcript sequences (only coding sequence (CDS) region). |
>In-frame_SLC26A6_ENST00000420764_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000420764_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000395550_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000395550_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000383733_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000383733_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000337000_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000337000_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000455886_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA >In-frame_SLC26A6_ENST00000455886_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_347nt ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA |
* Fusion transcript sequences (Full-length transcript). |
>In-frame_SLC26A6_ENST00000420764_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_792nt GGCCTCACCCGGTCCCGGCGCCGCCTTCCGGAGCGTAGCGGCCTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCC ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA ACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCC ATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTATCAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTCATCAAATCTT CCCATTCACTCAATATCCCATAAGCATCCAAACTCCATTAAGGAGAGTTGTTCAGGTCACTGCACAAATATATCTGCAATTATTCATACT CTGTAACACTTGTATTAATTGCTGCATATGCTAATACTTTTCTAATGCTGACTTTTTAATATGTTATCACTGTAAAACACAGAAAAGTGA >In-frame_SLC26A6_ENST00000420764_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_581nt GGCCTCACCCGGTCCCGGCGCCGCCTTCCGGAGCGTAGCGGCCTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCC ATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATA TCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTG CAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGA ACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCC ATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTATCAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTCATCAAATCTT >In-frame_SLC26A6_ENST00000395550_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_750nt CTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCAT TACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTA AGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAA CCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGC CACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTAT CAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTCATCAAATCTTCCCATTCACTCAATATCCCATAAGCATCCAAACTCCATTAAG GAGAGTTGTTCAGGTCACTGCACAAATATATCTGCAATTATTCATACTCTGTAACACTTGTATTAATTGCTGCATATGCTAATACTTTTC TAATGCTGACTTTTTAATATGTTATCACTGTAAAACACAGAAAAGTGATTAATGAATGATAATTTAGATCCATTTCTTTTGTGAATGTGC >In-frame_SLC26A6_ENST00000395550_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_539nt CTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCAT TACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTA AGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAA CCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGC CACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTAT >In-frame_SLC26A6_ENST00000383733_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_763nt GGAGCGTAGCGGCCTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACA ACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAG AATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTA TTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGG ATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCA ACTCTTTTTTTATCAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTCATCAAATCTTCCCATTCACTCAATATCCCATAAGCATCC AAACTCCATTAAGGAGAGTTGTTCAGGTCACTGCACAAATATATCTGCAATTATTCATACTCTGTAACACTTGTATTAATTGCTGCATAT GCTAATACTTTTCTAATGCTGACTTTTTAATATGTTATCACTGTAAAACACAGAAAAGTGATTAATGAATGATAATTTAGATCCATTTCT >In-frame_SLC26A6_ENST00000383733_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_552nt GGAGCGTAGCGGCCTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACA ACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAG AATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTA TTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGG ATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCA ACTCTTTTTTTATCAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTCATCAAATCTTCCCATTCACTCAATATCCCATAAGCATCC >In-frame_SLC26A6_ENST00000337000_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_802nt GAGCGCAGCTGGCCTCACCCGGTCCCGGCGCCGCCTTCCGGAGCGTAGCGGCCTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAA CTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCT AATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAA CGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGAT GATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGA ATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTATCAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTC ATCAAATCTTCCCATTCACTCAATATCCCATAAGCATCCAAACTCCATTAAGGAGAGTTGTTCAGGTCACTGCACAAATATATCTGCAAT TATTCATACTCTGTAACACTTGTATTAATTGCTGCATATGCTAATACTTTTCTAATGCTGACTTTTTAATATGTTATCACTGTAAAACAC >In-frame_SLC26A6_ENST00000337000_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_591nt GAGCGCAGCTGGCCTCACCCGGTCCCGGCGCCGCCTTCCGGAGCGTAGCGGCCTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAA CTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCATTACTGACTTCCGTGCTACATGATGACAAAGAATTTCCT AATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTAAGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAA CGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAACCACAATTTTACAGAACTTTAACCTGAAATCTGTTGAT GATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGCCACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGA ATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTATCAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTC >In-frame_SLC26A6_ENST00000455886_chr3_48672804_-_CYP2C8_ENST00000371270_chr10_96798795_-_750nt CTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCAT TACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTA AGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAA CCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGC CACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTAT CAAGGACATTCCCACTATTATGTCTTCTCTGACCTCTCATCAAATCTTCCCATTCACTCAATATCCCATAAGCATCCAAACTCCATTAAG GAGAGTTGTTCAGGTCACTGCACAAATATATCTGCAATTATTCATACTCTGTAACACTTGTATTAATTGCTGCATATGCTAATACTTTTC TAATGCTGACTTTTTAATATGTTATCACTGTAAAACACAGAAAAGTGATTAATGAATGATAATTTAGATCCATTTCTTTTGTGAATGTGC >In-frame_SLC26A6_ENST00000455886_chr3_48672804_-_CYP2C8_ENST00000535898_chr10_96798795_-_539nt CTCTAGCTCGAGCAGCAGGAGCAGCCCGCACCGGACAACTTGCGAGCCATGGGGCTGGCGGATGCGTCGGGGGCACAACCATAATGGCAT TACTGACTTCCGTGCTACATGATGACAAAGAATTTCCTAATCCAAATATCTTTGACCCTGGCCACTTTCTAGATAAGAATGGCAACTTTA AGAAAAGTGACTACTTCATGCCTTTCTCAGCAGGAAAACGAATTTGTGCAGGAGAAGGACTTGCCCGCATGGAGCTATTTTTATTTCTAA CCACAATTTTACAGAACTTTAACCTGAAATCTGTTGATGATTTAAAGAACCTCAATACTACTGCAGTTACCAAAGGGATTGTTTCTCTGC CACCCTCATACCAGATCTGCTTCATCCCTGTCTGAAGAATGCTAGCCCATCTGGCTGCCGATCTGCTATCACCTGCAACTCTTTTTTTAT |
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FusionGenePPI for SLC26A6_CYP2C8 |
Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
Hgene | Hgene's interactors | Tgene | Tgene's interactors |
SLC26A6 | LGALS9C, NT5E, FLOT2, ENPP6, FAF2, IRGC, VAC14, PPP6R2, ATP2B2, SLC15A1, P2RX2, PMEL, LRP1, TMCO3, CD79A, PDCD1, TNFSF8 | CYP2C8 | A2M, BLMH, APOE, DNAJB1, LONP1, MAST1, EXOC6, IFIT3, ECSIT, PSEN1, RNF32, PGRMC1, RIN3, CYP2C8 |
- Retained PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
- Lost PPIs in in-frame fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
- Retained PPIs, but lost function due to frame-shift fusion. |
Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for SLC26A6_CYP2C8 |
Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Tgene | CYP2C8 | P10632 | DB00951 | Isoniazid | Cytochrome P450 2C8 | small molecule | approved|investigational |
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RelatedDiseases for SLC26A6_CYP2C8 |
Diseases associated with fusion partners. (DisGeNet 4.0) |
Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Tgene | CYP2C8 | C0022658 | Kidney Diseases | 1 | CTD_human |
Tgene | CYP2C8 | C0027765 | nervous system disorder | 1 | CTD_human |
Tgene | CYP2C8 | C0035410 | Rhabdomyolysis | 1 | CTD_human |
Tgene | CYP2C8 | C1961102 | Precursor Cell Lymphoblastic Leukemia Lymphoma | 1 | CTD_human |