|
||||||
|
 | |
| |
| |
| |
| |
|
Fusion gene ID: 33804 |
FusionGeneSummary for SHPRH_RCL1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: SHPRH_RCL1 | Fusion gene ID: 33804 | Hgene | Tgene | Gene symbol | SHPRH | RCL1 | Gene ID | 257218 | 10171 |
| Gene name | SNF2 histone linker PHD RING helicase | RNA terminal phosphate cyclase like 1 | |
| Synonyms | bA545I5.2 | RNAC|RPCL1 | |
| Cytomap | 6q24.3 | 9p24.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | E3 ubiquitin-protein ligase SHPRH2610103K11RikRING-type E3 ubiquitin transferase SHPRHSNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligaseSNF2, histone-linker, PHD and RING finger domain-containing helicase | RNA 3'-terminal phosphate cyclase-like proteinRNA cyclase homolog | |
| Modification date | 20180519 | 20180523 | |
| UniProtAcc | Q149N8 | Q9Y2P8 | |
| Ensembl transtripts involved in fusion gene | ENST00000367505, ENST00000367503, ENST00000438092, ENST00000275233, | ENST00000381750, ENST00000381730, ENST00000381728, ENST00000448872, ENST00000381732, ENST00000445485, | |
| Fusion gene scores | * DoF score | 4 X 3 X 3=36 | 6 X 5 X 6=180 |
| # samples | 4 | 6 | |
| ** MAII score | log2(4/36*10)=0.15200309344505 effective Gene in Pan-Cancer Fusion Genes (eGinPCFGs). DoF>8 and MAII>0 | log2(6/180*10)=-1.58496250072116 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: SHPRH [Title/Abstract] AND RCL1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | Tumor suppressor gene involved fusion gene, retained protein feature but frameshift. DDR (DNA damage repair) gene involved fusion gene, in-frame but not retained their domain. DDR (DNA damage repair) gene involved fusion gene, retained protein feature but frameshift. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | SHPRH | GO:0000209 | protein polyubiquitination | 17108083 |
| Hgene | SHPRH | GO:0006974 | cellular response to DNA damage stimulus | 25023518 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | BLCA | TCGA-GC-A4ZW-01A | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000367505 | ENST00000381750 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000367505 | ENST00000381730 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000367505 | ENST00000381728 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000367505 | ENST00000448872 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000367505 | ENST00000381732 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000367505 | ENST00000445485 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| Frame-shift | ENST00000367503 | ENST00000381750 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000367503 | ENST00000381730 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000367503 | ENST00000381728 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000367503 | ENST00000448872 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000367503 | ENST00000381732 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000367503 | ENST00000445485 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| Frame-shift | ENST00000438092 | ENST00000381750 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000438092 | ENST00000381730 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000438092 | ENST00000381728 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000438092 | ENST00000448872 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000438092 | ENST00000381732 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000438092 | ENST00000445485 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| Frame-shift | ENST00000275233 | ENST00000381750 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000275233 | ENST00000381730 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000275233 | ENST00000381728 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| In-frame | ENST00000275233 | ENST00000448872 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000275233 | ENST00000381732 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
| 5CDS-intron | ENST00000275233 | ENST00000445485 | SHPRH | chr6 | 146273485 | - | RCL1 | chr9 | 4860125 | + |
Top |
FusionProtFeatures for SHPRH_RCL1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| SHPRH | RCL1 |
| Does not have cyclase activity. Plays a role in 40S-ribosomal-subunit biogenesis in the early pre-rRNA processingsteps at sites A0, A1 and A2 that are required for propermaturation of the 18S RNA (By similarity). {ECO:0000250}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
Top |
FusionGeneSequence for SHPRH_RCL1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_304aa MSSRRKRAPPVRVDEEKRQQLHWNMHEDRRNEPIIISDDDEQPCPGSDTSSAHYIILSDSLKEEVAHRDKKRCSKVVSFSKPIEKEETVG IFSPLSVKLNIVISPYHFDNSWKAFLGELTLQLLPAQSLIENFSERSITLMSSESSNQFLIYVHSKGEDVEKQKKEPMSICDKGILVESS FSGEMLEDLGWLQKKRRIKLYQKPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFNQLMKKVMEKLHNSIIPGXNFCGIXRAFSRLCL |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_914nt ATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGG AATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGT CTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGT ATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACT CTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTG ATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCC TTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATC AAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTC ATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTA AAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCA |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_1376nt GTGCTCTGACGAGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGTTTCTGGGTCTCCCGGGGGACCC CTACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTGATCTGCTGGGTCTGTAG AGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAG CAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGA ACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAA GGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTT TTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCA GCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTA TGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAG TGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGT TGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAA GAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATT GAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACC CTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACAAAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGG ATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAAATATCAATATACAAATAAAAGACATCCCTGTAGCATATGGTTTC >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_1196nt GTGCTCTGACGAGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGTTTCTGGGTCTCCCGGGGGACCC CTACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTGATCTGCTGGGTCTGTAG AGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAG CAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGA ACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAA GGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTT TTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCA GCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTA TGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAG TGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGT TGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAA GAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATT GAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACC >In-frame_SHPRH_ENST00000367505_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_1340nt GTGCTCTGACGAGCGCGTTCGCCTTGACCCCACGCTACAGCGCGCGCCCGGCAGCTAGGCGCTGTGGTTTCTGGGTCTCCCGGGGGACCC CTACACGTTCCGGCAAAAAGCGCTCGTGCCCACCTCAAGCCCATGTTCGGTGGGTGGCGAATGCGTGCCCGTGATCTGCTGGGTCTGTAG AGGAGCGCAGGCCTGGTGCAAACAGACTCAAGAGGCTCGGAGAACCAGCTTGGAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAG CAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAGAGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGA ACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCAGATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAA GGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTGAGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTT TTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCATTTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCA GCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGTATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTA TGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCGATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAG TGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGAATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGT TGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTGAGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAA GAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAATTTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATT GAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGCTGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACC CTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACAAAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGG >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_1510nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC TGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACCCTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACA AAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGGATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAA >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_1330nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC >In-frame_SHPRH_ENST00000367503_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_1474nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC TGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACCCTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACA AAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGGATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAA >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_1510nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC TGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACCCTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACA AAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGGATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAA >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_1330nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC >In-frame_SHPRH_ENST00000438092_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_1474nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC TGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACCCTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACA AAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGGATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAA >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000381730_chr9_4860125_+_1510nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC TGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACCCTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACA AAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGGATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAA >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000381728_chr9_4860125_+_1330nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC >In-frame_SHPRH_ENST00000275233_chr6_146273485_-_RCL1_ENST00000448872_chr9_4860125_+_1474nt GTCTTTGGCCTCCGGGACCAGGGAGGGAGGACGCTGGTTGTCCTGGAGCCCGGGAAGCTCAAGGGCTGAGAGGGAGCCGCTGCGCGAGTC TTCCCCACCTCTTCCCGATCCCGGACTAGCGAACTTCGGACCACCACGTCCCTCCGGGGATAAAGTGGGGTCGTGGGAAAGGAGGCTGTG CTTCTCCTCATGCACTGGGGCCTGCGGTGTTTGTCTCGAGCGTCCAACACACTAGGATCCGGGAGTCCGTCGTCACGCTCCTTGGCCTCG CGGTCGCTTGTTTGCTCGGCCTGCTGGGAGCGATCCGGCGCTGACAGCCCCGCTCAGACTCCGGGAGCCGCTTGTGGGTCTTTCGGAAGA TAACTGAAGTTCACAGTTACCAGCCAAGAAAACTTGAAAATGAGCAGCCGACGGAAACGTGCTCCTCCAGTGAGGGTAGATGAGGAAAAG AGGCAGCAGCTTCATTGGAATATGCATGAGGACAGAAGGAATGAACCTATCATCATAAGTGATGATGACGAGCAGCCCTGCCCAGGTTCA GATACCTCTTCTGCTCATTATATCATTCTAAGTGATAGTCTAAAGGAAGAAGTGGCTCACAGAGATAAGAAGAGGTGTTCAAAAGTGGTG AGCTTCTCAAAACCAATTGAAAAAGAAGAGACTGTTGGTATTTTTTCCCCTTTGTCTGTAAAGTTAAATATTGTGATTTCTCCCTATCAT TTTGATAATTCCTGGAAAGCATTTCTAGGAGAATTAACTCTTCAGCTTCTTCCTGCACAGAGTTTAATTGAAAATTTTTCCGAAAGGAGT ATTACATTGATGAGTTCAGAGTCAAGCAATCAGTTCCTGATTTATGTTCATTCAAAAGGTGAAGATGTAGAGAAACAAAAAAAAGAACCG ATGAGTATTTGTGACAAGGGTATTCTGGTGGAGTCATCCTTCAGTGGTGAAATGTTAGAAGATTTGGGGTGGCTACAAAAGAAGAGAAGA ATAAAACTCTATCAGAAACCAGAAGGAAATCACATTATCAAGGTTGGAATTTATCTTTTGGAAGCTGGCCTAGCAAAACTAGACTTCTTG AGTGATGCAAATTCAAGAATGAAAAAGTTCAATCAGCTCATGAAGAAAGTAATGGAAAAGTTACACAATTCTATTATTCCAGGATAGAAT TTTTGCGGCATTTGAAGAGCTTTTTCCAGATTATGTTTAAAATTGAAACCAAGCCATGTGGTGAAGAACTCAAGGGTGGGGATAAAGTGC TGATGACCTGTGTTGGCATTGGTTTCTCCAACCTTAGCAAGACCCTCAAGTGATAACCATCACAAGATAAGGCCCCAATGCCTACAGACA AAGCAGAAGCTGCCACGGACACCAATGGGACCAAGTCCAAATGGATTAATCCAGGACAGAATAGCCACTTGCTTAATTTTCTGTGAAGAA |
Top |
FusionGenePPI for SHPRH_RCL1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| SHPRH | FDFT1, FBXW7, USP36, USP49, RAD18, HLTF, UBE2V2, UBE2N, UBE2A, PCNA, DTL, C17orf59, EDARADD, RBBP7, HIST1H3A, HIST1H4A, POLR1A, UBTF | RCL1 | HDGF, SIRT7, HECW2, MOV10, NXF1, BRCA1, SUZ12, EED, RNF2, IFI16, XPO1, HIST1H3E, TFG, PAPD5, GEMIN7, USF1, PTPN2, NCL, TRIM25 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
Top |
RelatedDrugs for SHPRH_RCL1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
Top |
RelatedDiseases for SHPRH_RCL1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
Copyright 2018-Present -The University of Texas Health Science Center at Houston (UTHealth)
|