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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDrugs

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RelatedDiseases

Fusion gene ID: 32774

FusionGeneSummary for SCAPER_TSPAN3

check button Fusion gene summary
Fusion gene informationFusion gene name: SCAPER_TSPAN3
Fusion gene ID: 32774
HgeneTgene
Gene symbol

SCAPER

TSPAN3

Gene ID

49855

10099

Gene nameS-phase cyclin A associated protein in the ERtetraspanin 3
SynonymsMSTP063|ZNF291|Zfp291TM4-A|TM4SF8|TSPAN-3
Cytomap

15q24.3

15q24.3

Type of geneprotein-codingprotein-coding
DescriptionS phase cyclin A-associated protein in the endoplasmic reticulumzinc finger protein 291tetraspanin-3tetraspan 3tetraspan TM4SFtetraspanin TM4-Atransmembrane 4 superfamily member 8
Modification date2018051920180523
UniProtAcc

Q9BY12

O60637

Ensembl transtripts involved in fusion geneENST00000538941, ENST00000563290, 
ENST00000324767, ENST00000562890, 
ENST00000267970, ENST00000346495, 
ENST00000424443, ENST00000561277, 
ENST00000559494, ENST00000558745, 
ENST00000558394, 
Fusion gene scores* DoF score7 X 6 X 7=2946 X 5 X 4=120
# samples 77
** MAII scorelog2(7/294*10)=-2.0703893278914
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(7/120*10)=-0.777607578663552
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: SCAPER [Title/Abstract] AND TSPAN3 [Title/Abstract] AND fusion [Title/Abstract]

Functional or gene categories assigned by FusionGDB annotation
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID

check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVSKCMTCGA-EE-A29D-06ASCAPERchr15

77134075

-TSPAN3chr15

77348597

-
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
5UTR-3CDSENST00000538941ENST00000267970SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5UTR-3CDSENST00000538941ENST00000346495SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5UTR-intronENST00000538941ENST00000424443SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5UTR-5UTRENST00000538941ENST00000561277SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5UTR-intronENST00000538941ENST00000559494SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5UTR-5UTRENST00000538941ENST00000558745SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5UTR-5UTRENST00000538941ENST00000558394SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
Frame-shiftENST00000563290ENST00000267970SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
Frame-shiftENST00000563290ENST00000346495SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-intronENST00000563290ENST00000424443SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-5UTRENST00000563290ENST00000561277SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-intronENST00000563290ENST00000559494SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-5UTRENST00000563290ENST00000558745SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-5UTRENST00000563290ENST00000558394SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
In-frameENST00000324767ENST00000267970SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
In-frameENST00000324767ENST00000346495SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-intronENST00000324767ENST00000424443SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-5UTRENST00000324767ENST00000561277SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-intronENST00000324767ENST00000559494SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-5UTRENST00000324767ENST00000558745SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
5CDS-5UTRENST00000324767ENST00000558394SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-3CDSENST00000562890ENST00000267970SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-3CDSENST00000562890ENST00000346495SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-intronENST00000562890ENST00000424443SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-5UTRENST00000562890ENST00000561277SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-intronENST00000562890ENST00000559494SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-5UTRENST00000562890ENST00000558745SCAPERchr15

77134075

-TSPAN3chr15

77348597

-
intron-5UTRENST00000562890ENST00000558394SCAPERchr15

77134075

-TSPAN3chr15

77348597

-

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FusionProtFeatures for SCAPER_TSPAN3


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
SCAPER

Q9BY12

TSPAN3

O60637

CCNA2/CDK2 regulatory protein that transiently maintainsCCNA2 in the cytoplasm. {ECO:0000269|PubMed:17698606}. Regulates the proliferation and migration ofoligodendrocytes, a process essential for normal myelination andrepair. {ECO:0000250}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note

- In-frame and not-retained protein feature among the 13 regional features.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note


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FusionGeneSequence for SCAPER_TSPAN3


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.
>In-frame_SCAPER_ENST00000324767_chr15_77134075_-_TSPAN3_ENST00000267970_chr15_77348597_-_364aa
MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKPKCQTGGKSKRTIQGTHKTTKQSTAVDCKITSSTTGDKHFDKSPTKT
RHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLI
GCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTD
WFKETKNQSVPLSCCRETASNCNGSLAHPSDLYAEGCEALVVKKLQEIMMHVIWAALAFAAIQLLGMLCACIVLCRRSRDPAYELLITGG

>In-frame_SCAPER_ENST00000324767_chr15_77134075_-_TSPAN3_ENST00000346495_chr15_77348597_-_339aa
MMASFQRSNSHDKVRRIVAEEGRTARNLIAWSVPLESKDDDGKPKCQTGGKSKRTIQGTHKTTKQSTAVDCKITSSTTGDKHFDKSPTKT
RHPRKIDLRARYWAFLFDNLRRAVDEIYVTCESDQSVVECKGAAGILCYVGAYVFITYDDYDHFFEDVYTLIPAVVIIAVGALLFIIGLI
GCCATIRESRCGLATVENEVDRSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKETKNQSVPLSCCRETASNCNGS


* Fusion transcript sequences (only coding sequence (CDS) region).
>In-frame_SCAPER_ENST00000324767_chr15_77134075_-_TSPAN3_ENST00000267970_chr15_77348597_-_1092nt
ATGATGGCTTCATTCCAGCGCTCCAATAGTCATGACAAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCT
TGGAGTGTTCCACTAGAAAGCAAAGATGATGATGGAAAACCTAAATGTCAAACTGGTGGAAAATCTAAGAGGACCATTCAAGGCACTCAT
AAAACTACTAAACAGAGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGGAGATAAACACTTTGATAAAAGTCCCACTAAAACA
AGGCACCCTCGGAAAATTGATCTAAGAGCTCGATACTGGGCATTTCTTTTTGATAATCTTCGCCGAGCAGTAGATGAAATCTATGTAACT
TGCGAATCAGATCAGAGTGTGGTCGAATGTAAGGGGGCAGCTGGCATTTTATGCTATGTGGGAGCCTATGTCTTCATCACTTATGATGAC
TATGACCACTTCTTTGAAGATGTGTACACGCTCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCATTGGGCTAATT
GGCTGCTGTGCCACAATCCGGGAAAGTCGCTGTGGACTTGCCACGTTTGTCATCATCCTGCTCTTGGTTTTTGTCACAGAAGTTGTTGTA
GTGGTTTTGGGATATGTTTACAGAGCAAAGGTGGAAAATGAGGTTGATCGCAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAAC
CCTGATGCTGCTAGCCGGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTGGAATTCACAACTACTCAGACTGGGAAAATACAGAT
TGGTTCAAAGAAACCAAAAACCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTGTAATGGCAGCCTGGCCCACCCTTCC
GACCTCTATGCTGAGGGGTGTGAGGCTCTAGTAGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCCGCACTGGCATTTGCA
GCTATTCAGCTGCTGGGCATGCTGTGTGCTTGCATCGTGTTGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTGGCGGA

>In-frame_SCAPER_ENST00000324767_chr15_77134075_-_TSPAN3_ENST00000346495_chr15_77348597_-_1017nt
ATGATGGCTTCATTCCAGCGCTCCAATAGTCATGACAAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCT
TGGAGTGTTCCACTAGAAAGCAAAGATGATGATGGAAAACCTAAATGTCAAACTGGTGGAAAATCTAAGAGGACCATTCAAGGCACTCAT
AAAACTACTAAACAGAGTACTGCAGTGGACTGTAAAATAACATCGTCTACGACTGGAGATAAACACTTTGATAAAAGTCCCACTAAAACA
AGGCACCCTCGGAAAATTGATCTAAGAGCTCGATACTGGGCATTTCTTTTTGATAATCTTCGCCGAGCAGTAGATGAAATCTATGTAACT
TGCGAATCAGATCAGAGTGTGGTCGAATGTAAGGGGGCAGCTGGCATTTTATGCTATGTGGGAGCCTATGTCTTCATCACTTATGATGAC
TATGACCACTTCTTTGAAGATGTGTACACGCTCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCATTGGGCTAATT
GGCTGCTGTGCCACAATCCGGGAAAGTCGCTGTGGACTTGCCACGGTGGAAAATGAGGTTGATCGCAGCATTCAGAAAGTGTATAAGACC
TACAATGGAACCAACCCTGATGCTGCTAGCCGGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTGGAATTCACAACTACTCAGAC
TGGGAAAATACAGATTGGTTCAAAGAAACCAAAAACCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTGTAATGGCAGC
CTGGCCCACCCTTCCGACCTCTATGCTGAGGGGTGTGAGGCTCTAGTAGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCC
GCACTGGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCTTGCATCGTGTTGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTC


* Fusion transcript sequences (Full-length transcript).
>In-frame_SCAPER_ENST00000324767_chr15_77134075_-_TSPAN3_ENST00000267970_chr15_77348597_-_3969nt
GAGTCATACTCCATGGGTTTATGTGATAAATGATCTTGGCATAGAAGAGAATTTAAAGAATGATGGCTTCATTCCAGCGCTCCAATAGTC
ATGACAAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCTTGGAGTGTTCCACTAGAAAGCAAAGATGATG
ATGGAAAACCTAAATGTCAAACTGGTGGAAAATCTAAGAGGACCATTCAAGGCACTCATAAAACTACTAAACAGAGTACTGCAGTGGACT
GTAAAATAACATCGTCTACGACTGGAGATAAACACTTTGATAAAAGTCCCACTAAAACAAGGCACCCTCGGAAAATTGATCTAAGAGCTC
GATACTGGGCATTTCTTTTTGATAATCTTCGCCGAGCAGTAGATGAAATCTATGTAACTTGCGAATCAGATCAGAGTGTGGTCGAATGTA
AGGGGGCAGCTGGCATTTTATGCTATGTGGGAGCCTATGTCTTCATCACTTATGATGACTATGACCACTTCTTTGAAGATGTGTACACGC
TCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCATTGGGCTAATTGGCTGCTGTGCCACAATCCGGGAAAGTCGCT
GTGGACTTGCCACGTTTGTCATCATCCTGCTCTTGGTTTTTGTCACAGAAGTTGTTGTAGTGGTTTTGGGATATGTTTACAGAGCAAAGG
TGGAAAATGAGGTTGATCGCAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAACCCTGATGCTGCTAGCCGGGCTATTGATTATG
TACAGAGACAGCTGCATTGTTGTGGAATTCACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAAGAAACCAAAAACCAGAGTGTCC
CTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTGTAATGGCAGCCTGGCCCACCCTTCCGACCTCTATGCTGAGGGGTGTGAGGCTCTAG
TAGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCCGCACTGGCATTTGCAGCTATTCAGCTGCTGGGCATGCTGTGTGCTT
GCATCGTGTTGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTGGCGGAACCTATGCATAGTTGACAACTCAAGCCTGAG
CTTTTTGGTCTTGTTCTGATTTGGAAGGTGAATTGAGCAGGTCTGCTGCTGTTGGCCTCTGGAGTTCATTTAGTTAAAGCACATGTACAC
TGGTGTTGGACAGAGCAGCTTGGCTTTTCATGTGCCCACCTACTTACCTACTACCTGCGACTTTCTTTTTCCTTGTTCTAGCTGACTCTT
CATGCCCCTAAGATTTTAAGTACGATGGTGAACGTTCTAATTTCAGAACCAATTGCGAGTCATGTAGTGTGGTAGAATTAAAGGAGGACA
CGAGCCTGCTTCTGTTACCTCCAAGTGGTAACAGGACTGATGCCGAAATGTCACCAGGTCCTTTCAGTCTTCACAGTGGAGAACTCTTGG
CCAAAGGTTTTTGCGGGGAGGAGGAGGAAACCAGCTTTCTGGTTAAGGTTAACACCAGATGGTGCCCCTCATTGGTGTCCTTTTAAAAAA
TATTTACTGTAGTCCAATAAGATAGCAGCTGTACAAAATGACTAAAATAGATTGTAGGATCATATGGCGTATATCTTGGTTCATCTTCAA
AATCAGAGACTGAGCTTTGAAACTAGTGGTTTTTAATCAAAGTTGGCTTTATAGGAGGAGTATAATGTATGCACTACTGTTTTAAAAGAA
TTAGTGTGAGTGTGTTTTTGTATGAATGAGCCCATTCATGGTAAGTCTTAAGCTTGTTGGAAATAATGTACCCATGTAGACTAGCAAAAT
AGTATGTAGATGTGATCTCAGTTGTAAATAGAAAAATCTAATTCAATAAACTCTGTATCAGCCCCCAACATATTATTTTTCATTATTTGG
GGGATATTTCAGTTCCAGAGCAGCAGTATCATGTTTTCTTTGTTGGTGCTGTCTATAGTTCATCATGGTTTACGTGTGTTTTCGTTATAG
CTGTTGCCAGATTCTAAAGGGCTTGATATTCAAAAAACCACAGATGCTTTCAGTCCAGTATATCCTAGAAATATAGAGCTCTACTTTGTG
CAATGCACTGGGGATACAGTGGCGATACTGTCCTTGTCTTCAAGGAGTTCGGAGTCCTAGTATAGGAGACATACATAGGAGAAGATAATT
TTCACACTGCAGTGGTTGTAGTAATAGAATGGGAGTCCAAAGGGGAGTTCCGGAGAGGTCAGGGGTGACTTCCTGGAGGAGATGCCCAAG
CTTGGAGGCTGGATAGGCTTTGTTGAAAGATGGTACACAAGAGTGTGAAACAAAATTGTGTGTGCAGGGAGCTTAAAATACAAGGCTGGG
GAAAGAAGTTGGAGAAGCAGGAAAGCCCAGGCCCTCTAGTGTCTTACGGAACATCCTGTGGAGGTGAGAGCTGACTTGTAGGTGGAAGCA
GCTCTTTGGAGGTTTGATTTGGAAGGTGAACTGAGAAGAAGGTGGTGATGCAAGCCGGCCGTGCTGAAGCCAGGATGAATTGGTGTGACT
GGGCTTCAGTTAGGCTGGCATAGCAGTTGAGAGAGCTTAGCAGTGGGCAGCAGGGCACTGTTGGGGGCGGTGGTGAGCGGTGGATTCTGG
CTGTTTGGAGGCAGGACAGTGGTGGAATTCGATCATTGATTGGACGTGGGACAGAGAAGGGAGAAGAGAAGACTCATCTAGGATGAGTCC
CAGGTTTCTGGCTCAGTCAACTGGGGAAACAAAGTCACAGAGCTAGGGAGTAGTTAGAGAACACATCTGGGGGTGTGACTCATGGTCAGT
TTTGGGCTCGTCAGTTTTGAGATGCCCAAATATCATGCAGATCTGTCCCACCTGAAAATGGAGAAGACACGGGAAAGGAGAGGAGTAAAA
ACTAACTCCTTTTCACAAAGTGGAAGTTACCAGAATGTGATTTCAGAGGCCCCGGGGGATTTATCATGTGACTACTGACCCATCCCACCT
CTTGCCCCTGCCTGTTGCACAGTGGGCAAGAATGTTTGTGACCTTTCACTACCACCACCTCCCCCGAGCATGGTCCCCCCAGTTTTCAAT
ATGAACCATCCTGTGGGTACCCTGTCACAGGCTGGCCCTGAGGTGAGCAATATTTGGACTGTGATGTTGGTTGTTCTCCACTCTTTCTAC
AGGACAGAACAGGGCCTCTAGAGTGGGAAATGGCTTTGGGAAATATGCCAAGCAGTAGCCTTGTTCTTCAACTTGCCCAAGAGGATAATT
CTCCACACCCTTCCTGTACTCAGTCCTCAGTTTGCCTGGTGAGAGAGCAGCCTCCTCCCGTGTGCTCTGCCAGCTGGACCCAGACTGGCC
ATATTACCAGTGAGACCAAAAAGATGGAGGTGGGGAGGTAGCTCTGAGGTCTGGGAAACCATTCCAGCTCCTGCCAGTTTTAACTTGTGT
TTAATTCCTGGCACAGTTGTCCTGGAAATGCCTTTTTCTCTTGCCTGGGAACCACTAGAAGGGGATGTTGTCTGTGTTGGCCAGGGCCAT
GCAAATTCAACATCTTGTTTCTGCCCTTCCCCCGTGTAGCTGAGGCTAGGTGTTGGCATTACCCAGTGCTTGTTCTTCAGAGAGCAAAAG
CACTGCTCGTCATGTCTGAAATTTAGTGAGTGAGCTCACCCACTAGGCTGGTGTTTCCTGCCCGTGGCTGCACATTGGAAGCACCGGGGC
ACTTTGAGAACTACAGATGCCTGGGTCCCAGAGCATCTAAGGTGCTCTAGGGTGTGTCCAGGACACAGCCCTGGTTGAGGACCACTGCTA
TATTGTATGGCCTCTTTTAAAAAAGTTAATTTTACTTGGAAATGATTTCAAAGCTACAGAAAAGTTGCAAGAATAAAAACTGTACAAATG

>In-frame_SCAPER_ENST00000324767_chr15_77134075_-_TSPAN3_ENST00000346495_chr15_77348597_-_1881nt
GAGTCATACTCCATGGGTTTATGTGATAAATGATCTTGGCATAGAAGAGAATTTAAAGAATGATGGCTTCATTCCAGCGCTCCAATAGTC
ATGACAAAGTAAGGAGAATAGTTGCAGAGGAGGGTCGTACAGCAAGAAACCTAATAGCTTGGAGTGTTCCACTAGAAAGCAAAGATGATG
ATGGAAAACCTAAATGTCAAACTGGTGGAAAATCTAAGAGGACCATTCAAGGCACTCATAAAACTACTAAACAGAGTACTGCAGTGGACT
GTAAAATAACATCGTCTACGACTGGAGATAAACACTTTGATAAAAGTCCCACTAAAACAAGGCACCCTCGGAAAATTGATCTAAGAGCTC
GATACTGGGCATTTCTTTTTGATAATCTTCGCCGAGCAGTAGATGAAATCTATGTAACTTGCGAATCAGATCAGAGTGTGGTCGAATGTA
AGGGGGCAGCTGGCATTTTATGCTATGTGGGAGCCTATGTCTTCATCACTTATGATGACTATGACCACTTCTTTGAAGATGTGTACACGC
TCATCCCTGCTGTAGTGATCATAGCTGTAGGAGCCCTGCTTTTCATCATTGGGCTAATTGGCTGCTGTGCCACAATCCGGGAAAGTCGCT
GTGGACTTGCCACGGTGGAAAATGAGGTTGATCGCAGCATTCAGAAAGTGTATAAGACCTACAATGGAACCAACCCTGATGCTGCTAGCC
GGGCTATTGATTATGTACAGAGACAGCTGCATTGTTGTGGAATTCACAACTACTCAGACTGGGAAAATACAGATTGGTTCAAAGAAACCA
AAAACCAGAGTGTCCCTCTTAGCTGCTGCAGAGAGACTGCCAGCAATTGTAATGGCAGCCTGGCCCACCCTTCCGACCTCTATGCTGAGG
GGTGTGAGGCTCTAGTAGTGAAGAAGCTACAAGAAATCATGATGCATGTGATCTGGGCCGCACTGGCATTTGCAGCTATTCAGCTGCTGG
GCATGCTGTGTGCTTGCATCGTGTTGTGCAGAAGGAGTAGAGATCCTGCTTACGAGCTCCTCATCACTGGCGGAACCTATGCATAGTTGA
CAACTCAAGCCTGAGCTTTTTGGTCTTGTTCTGATTTGGAAGGTGAATTGAGCAGGTCTGCTGCTGTTGGCCTCTGGAGTTCATTTAGTT
AAAGCACATGTACACTGGTGTTGGACAGAGCAGCTTGGCTTTTCATGTGCCCACCTACTTACCTACTACCTGCGACTTTCTTTTTCCTTG
TTCTAGCTGACTCTTCATGCCCCTAAGATTTTAAGTACGATGGTGAACGTTCTAATTTCAGAACCAATTGCGAGTCATGTAGTGTGGTAG
AATTAAAGGAGGACACGAGCCTGCTTCTGTTACCTCCAAGTGGTAACAGGACTGATGCCGAAATGTCACCAGGTCCTTTCAGTCTTCACA
GTGGAGAACTCTTGGCCAAAGGTTTTTGCGGGGAGGAGGAGGAAACCAGCTTTCTGGTTAAGGTTAACACCAGATGGTGCCCCTCATTGG
TGTCCTTTTAAAAAATATTTACTGTAGTCCAATAAGATAGCAGCTGTACAAAATGACTAAAATAGATTGTAGGATCATATGGCGTATATC
TTGGTTCATCTTCAAAATCAGAGACTGAGCTTTGAAACTAGTGGTTTTTAATCAAAGTTGGCTTTATAGGAGGAGTATAATGTATGCACT
ACTGTTTTAAAAGAATTAGTGTGAGTGTGTTTTTGTATGAATGAGCCCATTCATGGTAAGTCTTAAGCTTGTTGGAAATAATGTACCCAT


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FusionGenePPI for SCAPER_TSPAN3


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
SCAPERCALM1, HECW2, CCNA2, APPL1, MZT1TSPAN3EWSR1, FAM189B, NDFIP2, NDFIP1, NOTCH3, CDC6, GABARAP, STX6, AGPAT3, SDCBP, CD320, KDSR, EPHA5, EPHA4, MAP1LC3B2, RNF149, CC2D1A, FGFR1, FGFR2, TNFRSF10B, UGCG, GOLGA7, SNX17, ZDHHC9, CSNK1G3, IFNGR1, ACVR1B, RDH14, PI4K2A, CD63, ARL17A, LRP10, RNF13, LPAR1, LRRC8B, SPPL2B, TSPAN2, LGALS9, GPR141, TRHDE, ABCG8, GPR114, TMEM30B, TMEM171, GPM6A, MANSC1, GPR21, TACR1, LGALS9C, EFNB2, LMAN2L, ADIPOR1


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for SCAPER_TSPAN3


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SCAPER_TSPAN3


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneSCAPERC3714756Intellectual Disability1CTD_human