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Center for Computational Systems Medicine
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FusionGeneSummary

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FusionProtFeature

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FusionGeneSequence

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FusionGenePPI

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RelatedDiseases

Fusion gene ID: 31530

FusionGeneSummary for RNF213_SLC26A11

check button Fusion gene summary
Fusion gene informationFusion gene name: RNF213_SLC26A11
Fusion gene ID: 31530
HgeneTgene
Gene symbol

RNF213

SLC26A11

Gene ID

57674

284129

Gene namering finger protein 213solute carrier family 26 member 11
SynonymsALO17|C17orf27|KIAA1618|MYMY2|MYSTR|NET57-
Cytomap

17q25.3

17q25.3

Type of geneprotein-codingprotein-coding
DescriptionE3 ubiquitin-protein ligase RNF213ALK lymphoma oligomerization partner on chromosome 17RING-type E3 ubiquitin transferase RNF213mysterinsodium-independent sulfate anion transportersolute carrier family 26 (anion exchanger), member 11
Modification date2018052720180523
UniProtAcc

Q63HN8

Q86WA9

Ensembl transtripts involved in fusion geneENST00000508628, ENST00000456466, 
ENST00000582970, ENST00000319921, 
ENST00000336301, ENST00000427003, 
ENST00000361193, ENST00000411502, 
ENST00000546047, ENST00000571602, 
ENST00000572725, 
Fusion gene scores* DoF score22 X 22 X 12=58084 X 5 X 7=140
# samples 308
** MAII scorelog2(30/5808*10)=-4.27500704749987
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
log2(8/140*10)=-0.807354922057604
possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs).
DoF>8 and MAII<0
Context

PubMed: RNF213 [Title/Abstract] AND SLC26A11 [Title/Abstract] AND fusion [Title/Abstract]

Identification of a novel gene fusion RNF213‑SLC26A11 in chronic myeloid leukemia by RNA-Seq. (pmid: 23151810)
Functional or gene categories assigned by FusionGDB annotationOncogene involved fusion gene, in-frame and retained their domain.
* DoF score (Degree of Frequency) = # partners X # break points X # cancer types
** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10)

check button Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
HgeneRNF213

GO:0016567

protein ubiquitination

21799892

HgeneRNF213

GO:0051260

protein homooligomerization

24658080|26126547

HgeneRNF213

GO:0051865

protein autoubiquitination

21799892

TgeneSLC26A11

GO:0008272

sulfate transport

12626430


check button Fusion gene information from three resources
(ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018))
* All genome coordinats were lifted-over on hg19.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
Data typeSourceCancer typeSampleHgeneHchrHbpHstrandTgeneTchrTbpTstrand
TCGARVBRCATCGA-D8-A27R-01ARNF213chr17

78237577

+SLC26A11chr17

78215570

+
TCGARVCOADTCGA-CA-6716-01ARNF213chr17

78324196

+SLC26A11chr17

78225128

+
TCGARVESCATCGA-LN-A7HW-01ARNF213chr17

78322086

+SLC26A11chr17

78225128

+
TCGALDKIRPTCGA-G7-6793-01ARNF213chr17

78332279

+SLC26A11chr17

78221929

+
TCGARVLIHCTCGA-DD-AAD6-01ARNF213chr17

78324196

+SLC26A11chr17

78225128

+
TCGALDLIHCTCGA-DD-AAD6-01ARNF213chr17

78322086

+SLC26A11chr17

78225128

+
* LD: Li Ding group's fusion gene list
  RV: Roel Verhaak group's fusion gene list
  ChiTaRs fusion database

check button Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure.
* Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser.
ORFHenstTenstHgeneHchrHbpHstrandTgeneTchrTbpTstrand
In-frameENST00000508628ENST00000361193RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000508628ENST00000411502RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000508628ENST00000546047RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000508628ENST00000571602RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000508628ENST00000572725RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000456466ENST00000361193RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000456466ENST00000411502RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000456466ENST00000546047RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000456466ENST00000571602RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000456466ENST00000572725RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000582970ENST00000361193RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000582970ENST00000411502RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000582970ENST00000546047RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000582970ENST00000571602RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000582970ENST00000572725RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000319921ENST00000361193RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000319921ENST00000411502RNF213chr17

78237577

+SLC26A11chr17

78215570

+
In-frameENST00000319921ENST00000546047RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000319921ENST00000571602RNF213chr17

78237577

+SLC26A11chr17

78215570

+
5CDS-intronENST00000319921ENST00000572725RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-3CDSENST00000336301ENST00000361193RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-3CDSENST00000336301ENST00000411502RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-3CDSENST00000336301ENST00000546047RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-intronENST00000336301ENST00000571602RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-intronENST00000336301ENST00000572725RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-3CDSENST00000427003ENST00000361193RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-3CDSENST00000427003ENST00000411502RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-3CDSENST00000427003ENST00000546047RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-intronENST00000427003ENST00000571602RNF213chr17

78237577

+SLC26A11chr17

78215570

+
intron-intronENST00000427003ENST00000572725RNF213chr17

78237577

+SLC26A11chr17

78215570

+
Frame-shitENST00000508628ENST00000361193RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000508628ENST00000411502RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000508628ENST00000546047RNF213chr17

78324196

+SLC26A11chr17

78225128

+
5CDS-intronENST00000508628ENST00000571602RNF213chr17

78324196

+SLC26A11chr17

78225128

+
5CDS-intronENST00000508628ENST00000572725RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000456466ENST00000361193RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000456466ENST00000411502RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000456466ENST00000546047RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-intronENST00000456466ENST00000571602RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-intronENST00000456466ENST00000572725RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000582970ENST00000361193RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000582970ENST00000411502RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000582970ENST00000546047RNF213chr17

78324196

+SLC26A11chr17

78225128

+
5CDS-intronENST00000582970ENST00000571602RNF213chr17

78324196

+SLC26A11chr17

78225128

+
5CDS-intronENST00000582970ENST00000572725RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000319921ENST00000361193RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000319921ENST00000411502RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000319921ENST00000546047RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-intronENST00000319921ENST00000571602RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-intronENST00000319921ENST00000572725RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000336301ENST00000361193RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000336301ENST00000411502RNF213chr17

78324196

+SLC26A11chr17

78225128

+
Frame-shitENST00000336301ENST00000546047RNF213chr17

78324196

+SLC26A11chr17

78225128

+
5CDS-intronENST00000336301ENST00000571602RNF213chr17

78324196

+SLC26A11chr17

78225128

+
5CDS-intronENST00000336301ENST00000572725RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000427003ENST00000361193RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000427003ENST00000411502RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-3CDSENST00000427003ENST00000546047RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-intronENST00000427003ENST00000571602RNF213chr17

78324196

+SLC26A11chr17

78225128

+
intron-intronENST00000427003ENST00000572725RNF213chr17

78324196

+SLC26A11chr17

78225128

+
In-frameENST00000508628ENST00000361193RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000508628ENST00000411502RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000508628ENST00000546047RNF213chr17

78322086

+SLC26A11chr17

78225128

+
5CDS-intronENST00000508628ENST00000571602RNF213chr17

78322086

+SLC26A11chr17

78225128

+
5CDS-intronENST00000508628ENST00000572725RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000456466ENST00000361193RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000456466ENST00000411502RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000456466ENST00000546047RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-intronENST00000456466ENST00000571602RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-intronENST00000456466ENST00000572725RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000582970ENST00000361193RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000582970ENST00000411502RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000582970ENST00000546047RNF213chr17

78322086

+SLC26A11chr17

78225128

+
5CDS-intronENST00000582970ENST00000571602RNF213chr17

78322086

+SLC26A11chr17

78225128

+
5CDS-intronENST00000582970ENST00000572725RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000319921ENST00000361193RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000319921ENST00000411502RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000319921ENST00000546047RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-intronENST00000319921ENST00000571602RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-intronENST00000319921ENST00000572725RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000336301ENST00000361193RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000336301ENST00000411502RNF213chr17

78322086

+SLC26A11chr17

78225128

+
In-frameENST00000336301ENST00000546047RNF213chr17

78322086

+SLC26A11chr17

78225128

+
5CDS-intronENST00000336301ENST00000571602RNF213chr17

78322086

+SLC26A11chr17

78225128

+
5CDS-intronENST00000336301ENST00000572725RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000427003ENST00000361193RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000427003ENST00000411502RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-3CDSENST00000427003ENST00000546047RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-intronENST00000427003ENST00000571602RNF213chr17

78322086

+SLC26A11chr17

78225128

+
intron-intronENST00000427003ENST00000572725RNF213chr17

78322086

+SLC26A11chr17

78225128

+
Frame-shitENST00000508628ENST00000361193RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000508628ENST00000411502RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000508628ENST00000546047RNF213chr17

78332279

+SLC26A11chr17

78221929

+
5CDS-intronENST00000508628ENST00000571602RNF213chr17

78332279

+SLC26A11chr17

78221929

+
5CDS-intronENST00000508628ENST00000572725RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000456466ENST00000361193RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000456466ENST00000411502RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000456466ENST00000546047RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-intronENST00000456466ENST00000571602RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-intronENST00000456466ENST00000572725RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000582970ENST00000361193RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000582970ENST00000411502RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000582970ENST00000546047RNF213chr17

78332279

+SLC26A11chr17

78221929

+
5CDS-intronENST00000582970ENST00000571602RNF213chr17

78332279

+SLC26A11chr17

78221929

+
5CDS-intronENST00000582970ENST00000572725RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000319921ENST00000361193RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000319921ENST00000411502RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000319921ENST00000546047RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-intronENST00000319921ENST00000571602RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-intronENST00000319921ENST00000572725RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000336301ENST00000361193RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000336301ENST00000411502RNF213chr17

78332279

+SLC26A11chr17

78221929

+
Frame-shitENST00000336301ENST00000546047RNF213chr17

78332279

+SLC26A11chr17

78221929

+
5CDS-intronENST00000336301ENST00000571602RNF213chr17

78332279

+SLC26A11chr17

78221929

+
5CDS-intronENST00000336301ENST00000572725RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000427003ENST00000361193RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000427003ENST00000411502RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-3CDSENST00000427003ENST00000546047RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-intronENST00000427003ENST00000571602RNF213chr17

78332279

+SLC26A11chr17

78221929

+
intron-intronENST00000427003ENST00000572725RNF213chr17

78332279

+SLC26A11chr17

78221929

+

Top

FusionProtFeatures for RNF213_SLC26A11


check buttonMain function of each fusion partner protein. (from UniProt)
HgeneTgene
RNF213

Q63HN8

SLC26A11

Q86WA9

Exhibits sodium-independent sulfate anion transporteractivity that may cooperate with SLC26A2 to mediate DIDS-sensitivesulfate uptake into high endothelial venules endothelial cells(HEVEC). {ECO:0000269|PubMed:12626430}.

check buttonRetention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

.

* Minus value of BPloci means that the break pointn is located before the CDS.
- In-frame and retained protein feature among the 13 regional features.
>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneRNF213chr17:78322086chr17:78225128ENST00000508628+3069343_37433665257Coiled coilOntology_term=ECO:0000255
HgeneRNF213chr17:78322086chr17:78225128ENST00000582970+2968343_37433175208Coiled coilOntology_term=ECO:0000255
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818470_584328607DomainSTAS
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818470_584328607DomainSTAS
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717470_584328607DomainSTAS
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717470_584328607DomainSTAS
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818329_341328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818363_374328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818396_398328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818420_441328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818463_606328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818329_341328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818363_374328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818396_398328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818420_441328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818463_606328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717329_341328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717363_374328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717396_398328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717420_441328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717463_606328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717329_341328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717363_374328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717396_398328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717420_441328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717463_606328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818342_362328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818375_395328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818399_419328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818442_462328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818342_362328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818375_395328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818399_419328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818442_462328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717342_362328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717375_395328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717399_419328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717442_462328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717342_362328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717375_395328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717399_419328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717442_462328607TransmembraneHelical

- In-frame and not-retained protein feature among the 13 regional features.
>>>>>>>>>>
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenProtein featureProtein feature note
HgeneRNF213chr17:78237577chr17:78215570ENST00000319921+217343_374321064Coiled coilOntology_term=ECO:0000255
HgeneRNF213chr17:78237577chr17:78215570ENST00000508628+269343_374325257Coiled coilOntology_term=ECO:0000255
HgeneRNF213chr17:78237577chr17:78215570ENST00000582970+268343_374325208Coiled coilOntology_term=ECO:0000255
HgeneRNF213chr17:78322086chr17:78225128ENST00000319921+117343_374-471064Coiled coilOntology_term=ECO:0000255
HgeneRNF213chr17:78237577chr17:78215570ENST00000319921+2173997_4036321064Zinc fingerRING-type
HgeneRNF213chr17:78237577chr17:78215570ENST00000508628+2693997_4036325257Zinc fingerRING-type
HgeneRNF213chr17:78237577chr17:78215570ENST00000582970+2683997_4036325208Zinc fingerRING-type
HgeneRNF213chr17:78322086chr17:78225128ENST00000319921+1173997_4036-471064Zinc fingerRING-type
HgeneRNF213chr17:78322086chr17:78225128ENST00000508628+30693997_403633665257Zinc fingerRING-type
HgeneRNF213chr17:78322086chr17:78225128ENST00000582970+29683997_403633175208Zinc fingerRING-type
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518470_584552607DomainSTAS
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518470_584552607DomainSTAS
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417470_584552607DomainSTAS
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417470_584552607DomainSTAS
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818118_119328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818141_147328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818169_197328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+8181_51328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818219_250328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818272_307328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+81873_73328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+81895_100328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818118_119328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818141_147328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818169_197328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+8181_51328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818219_250328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818272_307328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+81873_73328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+81895_100328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717118_119328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717141_147328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717169_197328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+7171_51328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717219_250328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717272_307328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+71773_73328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+71795_100328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717118_119328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717141_147328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717169_197328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+7171_51328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717219_250328607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717272_307328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+71773_73328607Topological domainCytoplasmic
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+71795_100328607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518118_119552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518141_147552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518169_197552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+15181_51552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518219_250552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518272_307552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518329_341552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518363_374552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518396_398552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518420_441552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518463_606552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+151873_73552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+151895_100552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518118_119552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518141_147552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518169_197552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+15181_51552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518219_250552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518272_307552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518329_341552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518363_374552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518396_398552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518420_441552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518463_606552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+151873_73552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+151895_100552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417118_119552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417141_147552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417169_197552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+14171_51552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417219_250552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417272_307552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417329_341552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417363_374552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417396_398552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417420_441552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417463_606552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+141773_73552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+141795_100552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417118_119552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417141_147552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417169_197552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+14171_51552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417219_250552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417272_307552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417329_341552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417363_374552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417396_398552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417420_441552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417463_606552607Topological domainExtracellular
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+141773_73552607Topological domainCytoplasmic
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+141795_100552607Topological domainExtracellular
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818101_117328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818120_140328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818148_168328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818198_218328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818251_271328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+818308_328328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+81852_72328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000361193+81874_94328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818101_117328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818120_140328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818148_168328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818198_218328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818251_271328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+818308_328328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+81852_72328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000411502+81874_94328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717101_117328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717120_140328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717148_168328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717198_218328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717251_271328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+717308_328328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+71752_72328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000546047+71774_94328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717101_117328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717120_140328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717148_168328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717198_218328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717251_271328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+717308_328328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+71752_72328607TransmembraneHelical
TgeneSLC26A11chr17:78237577chr17:78215570ENST00000572725+71774_94328607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518101_117552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518120_140552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518148_168552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518198_218552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518251_271552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518308_328552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518342_362552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518375_395552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518399_419552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+1518442_462552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+151852_72552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000361193+151874_94552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518101_117552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518120_140552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518148_168552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518198_218552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518251_271552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518308_328552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518342_362552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518375_395552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518399_419552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+1518442_462552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+151852_72552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000411502+151874_94552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417101_117552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417120_140552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417148_168552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417198_218552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417251_271552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417308_328552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417342_362552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417375_395552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417399_419552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+1417442_462552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+141752_72552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000546047+141774_94552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417101_117552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417120_140552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417148_168552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417198_218552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417251_271552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417308_328552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417342_362552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417375_395552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417399_419552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+1417442_462552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+141752_72552607TransmembraneHelical
TgeneSLC26A11chr17:78322086chr17:78225128ENST00000572725+141774_94552607TransmembraneHelical


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FusionGeneSequence for RNF213_SLC26A11


check button For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences.
(nt: nucleotides, aa: amino acids)

* Fusion amino acid sequences.

* Fusion transcript sequences (only coding sequence (CDS) region).

* Fusion transcript sequences (Full-length transcript).

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FusionGenePPI for RNF213_SLC26A11


check button Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in

ChiPPI page

.

check button Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160)
HgeneHgene's interactorsTgeneTgene's interactors
RNF213UBC, CBX2, CBX4, CBX6, EGFR, PLAC9, RNF213, TRIM23, GOLGA2, REL, TRIM27, TRIP6, UBXN11, KRT40, CD244, SCN2B, IFI16, PTPN1, MRPL50, RNASEH2B, GAN, MCM2, ATOH1, DLK2, SIGLECL1, SDC2, LAMP3, CYLDSLC26A11


check button - Retained PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenStill interaction with


check button - Lost PPIs in in-frame fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


check button - Retained PPIs, but lost function due to frame-shift fusion.
PartnerGeneHbpTbpENSTStrandBPexonTotalExonProtein feature loci*BPlociTotalLenInteraction lost with


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RelatedDrugs for RNF213_SLC26A11


check button Drugs targeting genes involved in this fusion gene.
(DrugBank Version 5.1.0 2018-04-02)
PartnerGeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for RNF213_SLC26A11


check button Diseases associated with fusion partners.
(DisGeNet 4.0)
PartnerGeneDisease IDDisease name# pubmedsSource
HgeneRNF213C1846689MOYAMOYA DISEASE 23UNIPROT