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Fusion gene ID: 30188 |
FusionGeneSummary for RAD51D_SLCO6A1 |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: RAD51D_SLCO6A1 | Fusion gene ID: 30188 | Hgene | Tgene | Gene symbol | RAD51D | SLCO6A1 | Gene ID | 5892 | 133482 |
| Gene name | RAD51 paralog D | solute carrier organic anion transporter family member 6A1 | |
| Synonyms | BROVCA4|R51H3|RAD51L3|TRAD | CT48|GST|OATP-I|OATP6A1|OATPY | |
| Cytomap | 17q12 | 5q21.1 | |
| Type of gene | protein-coding | protein-coding | |
| Description | DNA repair protein RAD51 homolog 4RAD51 homolog DRAD51-like protein 3recombination repair protein | solute carrier organic anion transporter family member 6A1cancer/testis antigen 48gonad-specific transporterorganic anion-transporting polypeptide Isolute carrier family 21 member 19testicular tissue protein Li 174testis-specific organic anion trans | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | O75771 | Q86UG4 | |
| Ensembl transtripts involved in fusion gene | ENST00000345365, ENST00000394589, ENST00000360276, ENST00000335858, ENST00000590016, ENST00000460118, ENST00000590380, ENST00000357906, | ENST00000506729, ENST00000379807, ENST00000389019, ENST00000513675, ENST00000379810, ENST00000514551, | |
| Fusion gene scores | * DoF score | 2 X 2 X 2=8 | 5 X 2 X 4=40 |
| # samples | 2 | 4 | |
| ** MAII score | log2(2/8*10)=1.32192809488736 | log2(4/40*10)=0 | |
| Context | PubMed: RAD51D [Title/Abstract] AND SLCO6A1 [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | DDR (DNA damage repair) gene involved fusion gene, retained protein feature but frameshift. | ||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | RAD51D | GO:0042148 | strand invasion | 11834724 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | LD | LUSC | TCGA-66-2754-01A | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| Frame-shift | ENST00000345365 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000345365 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000345365 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000345365 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000345365 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5CDS-intron | ENST00000345365 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| In-frame | ENST00000394589 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| In-frame | ENST00000394589 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| In-frame | ENST00000394589 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| In-frame | ENST00000394589 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| In-frame | ENST00000394589 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5CDS-intron | ENST00000394589 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000360276 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000360276 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000360276 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000360276 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000360276 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5CDS-intron | ENST00000360276 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000335858 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000335858 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000335858 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000335858 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000335858 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5CDS-intron | ENST00000335858 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000590016 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000590016 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000590016 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000590016 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000590016 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5CDS-intron | ENST00000590016 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000460118 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000460118 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000460118 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000460118 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| Frame-shift | ENST00000460118 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5CDS-intron | ENST00000460118 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5UTR-3CDS | ENST00000590380 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5UTR-3CDS | ENST00000590380 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5UTR-3CDS | ENST00000590380 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5UTR-3CDS | ENST00000590380 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5UTR-3CDS | ENST00000590380 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| 5UTR-intron | ENST00000590380 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| intron-3CDS | ENST00000357906 | ENST00000506729 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| intron-3CDS | ENST00000357906 | ENST00000379807 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| intron-3CDS | ENST00000357906 | ENST00000389019 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| intron-3CDS | ENST00000357906 | ENST00000513675 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| intron-3CDS | ENST00000357906 | ENST00000379810 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
| intron-intron | ENST00000357906 | ENST00000514551 | RAD51D | chr17 | 33433405 | - | SLCO6A1 | chr5 | 101748847 | - |
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FusionProtFeatures for RAD51D_SLCO6A1 |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| RAD51D | SLCO6A1 |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for RAD51D_SLCO6A1 |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000506729_chr5_101748847_-_421aa MGVLRVGLCPGLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLD KLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLD VLQELRGTVAQQNREVGKPHGSLQXKMXMLIFNLFFYMWKRXYXIFFSLLCRVYIFXSTKPKKDVLQLFLHXRRINNCRCRRXFYXCQTR EMXCKVLXVTFVHCFYLFYTYIFWFFWCTNRLGHDAGCTXQTAFSGLGCKLCDFENIWDYSWTINLXNVRRNFLYFTGCXXMWTHRTLLD >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000379807_chr5_101748847_-_421aa MGVLRVGLCPGLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLD KLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLD VLQELRGTVAQQNREVGKPHGSLQXKMXMLIFNLFFYMWKRXYXIFFSLLCRVYIFXSTKPKKDVLQLFLHXRRINNCRCRRXFYXCQTR EMXCKVLXVTFVHCFYLFYTYIFWFFWCTNRLGHDAGCTXQTAFSGLGCKLCDFENIWDYSWTINLXNVRRNFLYFTGCXXMWTHRTLLD >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000389019_chr5_101748847_-_421aa MGVLRVGLCPGLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLD KLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLD VLQELRGTVAQQNREVGKPHGSLQXKMXMLIFNLFFYMWKRXYXIFFSLLCRVYIFXSTKPKKDVLQLFLHXRRINNCRCRRXFYXCQTR EMXCKVLXVTFVHCFYLFYTYIFWFFWCTNRLGHDAGCTXQTAFSGLGCKLCDFENIWDYSWTINLXNVRRNFLYFTGCXXMWTHRTLLD >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000513675_chr5_101748847_-_421aa MGVLRVGLCPGLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLD KLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLD VLQELRGTVAQQNREVGKPHGSLQXKMXMLIFNLFFYMWKRXYXIFFSLLCRVYIFXSTKPKKDVLQLFLHXRRINNCRCRRXFYXCQTR EMXCKVLXVTFVHCFYLFYTYIFWFFWCTNRLGHDAGCTXQTAFSGLGCKLCDFENIWDYSWTINLXNVRRNFLYFTGCXXMWTHRTLLD >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000379810_chr5_101748847_-_421aa MGVLRVGLCPGLTEEMIQLLRSHRIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPVNGADLYEELKTSTAILSTGIGSLD KLLDAGLYTGEVTEIVGGPGSGKTQVCLCMAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQMLD VLQELRGTVAQQNREVGKPHGSLQXKMXMLIFNLFFYMWKRXYXIFFSLLCRVYIFXSTKPKKDVLQLFLHXRRINNCRCRRXFYXCQTR EMXCKVLXVTFVHCFYLFYTYIFWFFWCTNRLGHDAGCTXQTAFSGLGCKLCDFENIWDYSWTINLXNVRRNFLYFTGCXXMWTHRTLLD |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000506729_chr5_101748847_-_1264nt ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGAC CTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAG TTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGAACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGAT AAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATG GCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTT CAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGAT GTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAGGGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTC ATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTGAATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAA CCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGG GAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTGCTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAAT CGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTTCTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTAT TCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTTGTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGAT ATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATATGTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTT CATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAGATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTT >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000379807_chr5_101748847_-_1264nt ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGAC CTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAG TTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGAACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGAT AAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATG GCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTT CAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGAT GTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAGGGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTC ATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTGAATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAA CCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGG GAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTGCTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAAT CGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTTCTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTAT TCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTTGTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGAT ATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATATGTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTT CATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAGATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTT >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000389019_chr5_101748847_-_1264nt ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGAC CTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAG TTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGAACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGAT AAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATG GCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTT CAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGAT GTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAGGGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTC ATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTGAATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAA CCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGG GAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTGCTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAAT CGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTTCTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTAT TCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTTGTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGAT ATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATATGTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTT CATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAGATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTT >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000513675_chr5_101748847_-_1264nt ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGAC CTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAG TTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGAACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGAT AAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATG GCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTT CAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGAT GTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAGGGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTC ATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTGAATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAA CCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGG GAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTGCTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAAT CGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTTCTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTAT TCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTTGTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGAT ATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATATGTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTT CATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAGATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTT >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000379810_chr5_101748847_-_1264nt ATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGAGGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGAC CTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGGCTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAG TTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGAACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGAT AAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGAAATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATG GCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATATGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTT CAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCTCCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGAT GTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAGGGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTC ATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTGAATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAA CCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGG GAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTGCTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAAT CGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTTCTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTAT TCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTTGTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGAT ATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATATGTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTT CATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAGATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTT |
| * Fusion transcript sequences (Full-length transcript). |
| >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000506729_chr5_101748847_-_1760nt CGGTGTGTGTGTTGCGGCAGAAGCCAGCGCGCCTGTGTCCTCTCTAGGAAGGGGTAGGGGAGGGGCGTCTGGAGAGGACCCCCCGCGAAT GCCCACGTGACGTGCAGTCCCCCTGGGGCTGTTCCGGCCTGCGGGGAACATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGA GGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGG CTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAGTTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGA ACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGA AATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATA TGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCT CCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAG GGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTCATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTG AATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAACCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAG GATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGGGAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTG CTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAATCGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTT CTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTATTCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTT GTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGATATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATAT GTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTTCATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAG ATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTTGTAACTGGATCATCATTGTGATTGCAGATCATTTGAGGATC AGAGTGTGAAAACGAGTTTCTCTTTTACAGATTCTCCAAGATTTGTTTCTGTGCCCAACTTTCAGAAGAGGAAAATCACACATTATGTTT ACATAAGTAGCAAAAATATATTTATGGTGATCTGCATTTTCATAATAAAGTGTCCTATTGTGAAACATTTCTGATAATGTTTTTAATGTA TGTAGAATTTTTAGGATTTACTGGGAGAATTAAAGTTTAATAATTTTAGATTATTTACATTTCTTCTTAATATTCTGCTGTCTAGAAATA >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000379807_chr5_101748847_-_1545nt CGGTGTGTGTGTTGCGGCAGAAGCCAGCGCGCCTGTGTCCTCTCTAGGAAGGGGTAGGGGAGGGGCGTCTGGAGAGGACCCCCCGCGAAT GCCCACGTGACGTGCAGTCCCCCTGGGGCTGTTCCGGCCTGCGGGGAACATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGA GGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGG CTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAGTTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGA ACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGA AATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATA TGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCT CCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAG GGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTCATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTG AATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAACCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAG GATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGGGAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTG CTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAATCGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTT CTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTATTCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTT GTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGATATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATAT GTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTTCATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAG ATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTTGTAACTGGATCATCATTGTATTCTCCAAGATTTGTTTCTGT GCCCAACTTTCAGAAGAGGAAAATCACACATTATGTTTACATAAGTAGCAAAAATATATTTATGGTGATCTGCATTTTCATAATAAAGTG >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000389019_chr5_101748847_-_1597nt CGGTGTGTGTGTTGCGGCAGAAGCCAGCGCGCCTGTGTCCTCTCTAGGAAGGGGTAGGGGAGGGGCGTCTGGAGAGGACCCCCCGCGAAT GCCCACGTGACGTGCAGTCCCCCTGGGGCTGTTCCGGCCTGCGGGGAACATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGA GGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGG CTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAGTTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGA ACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGA AATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATA TGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCT CCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAG GGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTCATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTG AATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAACCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAG GATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGGGAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTG CTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAATCGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTT CTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTATTCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTT GTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGATATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATAT GTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTTCATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAG ATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTTGTAACTGGATCATCATTGTGATTGCAGATCATTTGAGGATC AGAGTGTGAAAACGAGTTTCTCTTTTACAGATTCTCCAAGATTTGTTTCTGTGCCCAACTTTCAGAAGAGGAAAATCACACATTATGTTT >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000513675_chr5_101748847_-_1544nt CGGTGTGTGTGTTGCGGCAGAAGCCAGCGCGCCTGTGTCCTCTCTAGGAAGGGGTAGGGGAGGGGCGTCTGGAGAGGACCCCCCGCGAAT GCCCACGTGACGTGCAGTCCCCCTGGGGCTGTTCCGGCCTGCGGGGAACATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGA GGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGG CTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAGTTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGA ACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGA AATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATA TGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCT CCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAG GGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTCATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTG AATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAACCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAG GATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGGGAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTG CTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAATCGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTT CTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTATTCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTT GTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGATATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATAT GTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTTCATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAG ATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTTGTAACTGGATCATCATTGTATTCTCCAAGATTTGTTTCTGT GCCCAACTTTCAGAAGAGGAAAATCACACATTATGTTTACATAAGTAGCAAAAATATATTTATGGTGATCTGCATTTTCATAATAAAGTG >In-frame_RAD51D_ENST00000394589_chr17_33433405_-_SLCO6A1_ENST00000379810_chr5_101748847_-_1592nt CGGTGTGTGTGTTGCGGCAGAAGCCAGCGCGCCTGTGTCCTCTCTAGGAAGGGGTAGGGGAGGGGCGTCTGGAGAGGACCCCCCGCGAAT GCCCACGTGACGTGCAGTCCCCCTGGGGCTGTTCCGGCCTGCGGGGAACATGGGCGTGCTCAGGGTCGGACTGTGCCCTGGCCTTACCGA GGAGATGATCCAGCTTCTCAGGAGCCACAGGATCAAGACAGTGGTGGACCTGGTTTCTGCAGACCTGGAAGAGGTAGCTCAGAAATGTGG CTTGTCTTACAAGGCCCTGGTTGCCCTGAGGCGGGTGCTGCTGGCTCAGTTCTCGGCTTTCCCCGTGAATGGCGCTGATCTCTACGAGGA ACTGAAGACCTCCACTGCCATCCTGTCCACTGGCATTGGCAGTCTTGATAAACTGCTTGATGCTGGTCTCTATACTGGAGAAGTGACTGA AATTGTAGGAGGCCCAGGTAGCGGCAAAACTCAGGTATGTCTCTGTATGGCAGCAAATGTGGCCCATGGCCTGCAGCAAAACGTCCTATA TGTAGATTCCAATGGAGGGCTGACAGCTTCCCGCCTCCTCCAGCTGCTTCAGGCTAAAACCCAGGATGAGGAGGAACAGGCAGAAGCTCT CCGGAGGATCCAGGTGGTGCATGCATTTGACATCTTCCAGATGCTGGATGTGCTGCAGGAGCTCCGAGGCACTGTGGCCCAGCAGAACAG GGAAGTTGGGAAACCTCACGGCTCCTTGCAATGAAAAATGTAGATGCTCATCTTCAATTTATTCTTCTATATGTGGAAGAGATGATATTG AATATTTTTCTCCCTGCTTTGCAGGGTGTACATATTCTAAAGCACAAAACCAAAAAAAGATGTACTACAATTGTTCTTGCATTAAAGAAG GATTAATAACTGCAGATGCAGAAGGTGATTTTATTGATGCCAGACCCGGGAAATGTGATGCAAAGTGCTATAAGTTACCTTTGTTCATTG CTTTTATCTTTTCTACACTTATATTTTCTGGTTTTTCTGGTGTACCAATCGTCTTGGCCATGACGCGGGTTGTACCTGACAAACTGCGTT CTCTGGCCTTGGGTGTAAGCTATGTGATTTTGAGAATATTTGGGACTATTCCTGGACCATCAATCTTTAAAATGTCAGGAGAAACTTCTT GTATTTTACGGGATGTTAATAAATGTGGACACACAGGACGTTGTTGGATATATAACAAGACAAAAATGGCTTTCTTATTGGTAGGAATAT GTTTTCTTTGCAAACTATGCACTATCATCTTCACTACTATTGCATTTTTCATATACAAACGTCGTCTAAATGAGAACACTGACTTCCCAG ATGTAACTGTGAAGAATCCAAAAGTTAAGAAAAAAGAAGAAACTGACTTGTAACTGGATCATCATTGTGATTGCAGATCATTTGAGGATC AGAGTGTGAAAACGAGTTTCTCTTTTACAGATTCTCCAAGATTTGTTTCTGTGCCCAACTTTCAGAAGAGGAAAATCACACATTATGTTT |
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FusionGenePPI for RAD51D_SLCO6A1 |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| RAD51D | XRCC2, RADIL, DCD, BLM, RAD51, RAD51B, RAD51C, SWSAP1, ZSWIM7, KIFC3, KRT15, IKZF1, IKZF3, AMOTL2, PRDM14, LZTS2, LNX1, C1orf94, CEP57L1, MOV10, NXF1, NDUFAF5, HUWE1, IPO8, RHOU, RNF138, DKKL1, CCL22, ICMT, ARL4C, TOMM22, WDR19, BRIP1, MKS1, HELQ, FANCA | SLCO6A1 | LAPTM4B, RNASE7, SLC9A1, CTSH, HAL, CPA4, PTPN1, ASAH1, EDA, TTYH3, PSMD11, TGM1 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for RAD51D_SLCO6A1 |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for RAD51D_SLCO6A1 |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Hgene | RAD51D | C0919267 | ovarian neoplasm | 1 | CTD_human |
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