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Fusion gene ID: 28952 |
FusionGeneSummary for PRR5L_ITPA |
 Fusion gene summary |
| Fusion gene information | Fusion gene name: PRR5L_ITPA | Fusion gene ID: 28952 | Hgene | Tgene | Gene symbol | PRR5L | ITPA | Gene ID | 79899 | 3704 |
| Gene name | proline rich 5 like | inosine triphosphatase | |
| Synonyms | PROTOR2 | C20orf37|HLC14-06-P|ITPase|My049|NTPase|dJ794I6.3 | |
| Cytomap | 11p13-p12 | 20p13 | |
| Type of gene | protein-coding | protein-coding | |
| Description | proline-rich protein 5-likeProtein observed with Rictor-2protor-2 | inosine triphosphate pyrophosphataseinosine triphosphatase (nucleoside triphosphate pyrophosphatase)inosine triphosphate pyrophosphohydrolasenon-canonical purine NTP pyrophosphatasenon-standard purine NTP pyrophosphatasenucleoside-triphosphate diphos | |
| Modification date | 20180523 | 20180523 | |
| UniProtAcc | Q6MZQ0 | Q9BY32 | |
| Ensembl transtripts involved in fusion gene | ENST00000530639, ENST00000311599, ENST00000378867, ENST00000389693, ENST00000527487, | ENST00000483354, ENST00000380113, ENST00000455664, ENST00000399838, | |
| Fusion gene scores | * DoF score | 2 X 1 X 2=4 | 4 X 3 X 4=48 |
| # samples | 2 | 4 | |
| ** MAII score | log2(2/4*10)=2.32192809488736 | log2(4/48*10)=-0.263034405833794 possibly effective Gene in Pan-Cancer Fusion Genes (peGinPCFGs). DoF>8 and MAII<0 | |
| Context | PubMed: PRR5L [Title/Abstract] AND ITPA [Title/Abstract] AND fusion [Title/Abstract] | ||
| Functional or gene categories assigned by FusionGDB annotation | |||
| * DoF score (Degree of Frequency) = # partners X # break points X # cancer types ** MAII score (Major Active Isofusion Index) = log2(# samples/DoF score*10) |
| Gene ontology of each fusion partner gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Partner | Gene | GO ID | GO term | PubMed ID |
| Hgene | PRR5L | GO:0038203 | TORC2 signaling | 22609986 |
| Fusion gene information from three resources (ChiTars (NAR, 2018), tumorfusions (NAR, 2018), Gao et al. (Cell, 2018)) * All genome coordinats were lifted-over on hg19. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| Data type | Source | Cancer type | Sample | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| TCGA | RV | UCEC | TCGA-AJ-A3NF-01A | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| * LD: Li Ding group's fusion gene list RV: Roel Verhaak group's fusion gene list ChiTaRs fusion database |
| Open reading frame (ORF) analsis of fusion genes based on Ensembl gene isoform structure. * Click on the break point to see the gene structure around the break point region using the UCSC Genome Browser. |
| ORF | Henst | Tenst | Hgene | Hchr | Hbp | Hstrand | Tgene | Tchr | Tbp | Tstrand |
| 5CDS-3UTR | ENST00000530639 | ENST00000483354 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000530639 | ENST00000380113 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000530639 | ENST00000455664 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000530639 | ENST00000399838 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000311599 | ENST00000483354 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000311599 | ENST00000380113 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000311599 | ENST00000455664 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000311599 | ENST00000399838 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000378867 | ENST00000483354 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000378867 | ENST00000380113 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000378867 | ENST00000455664 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000378867 | ENST00000399838 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| intron-3UTR | ENST00000389693 | ENST00000483354 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| intron-3UTR | ENST00000389693 | ENST00000380113 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| intron-3UTR | ENST00000389693 | ENST00000455664 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| intron-3UTR | ENST00000389693 | ENST00000399838 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000527487 | ENST00000483354 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000527487 | ENST00000380113 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000527487 | ENST00000455664 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
| 5CDS-3UTR | ENST00000527487 | ENST00000399838 | PRR5L | chr11 | 36424928 | + | ITPA | chr20 | 3202487 | + |
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FusionProtFeatures for PRR5L_ITPA |
| Main function of each fusion partner protein. (from UniProt) |
| Hgene | Tgene |
| PRR5L | ITPA |
| Associates with the mTORC2 complex that regulatescellular processes including survival and organization of thecytoskeleton (PubMed:17461779). Regulates the activity of themTORC2 complex in a substrate-specific manner preventing forinstance the specific phosphorylation of PKCs and therebycontrolling cell migration (PubMed:22609986). Plays a role in thestimulation of ZFP36-mediated mRNA decay of several ZFP36-associated mRNAs, such as TNF-alpha and GM-CSF, in response tostress (PubMed:21964062). Required for ZFP36 localization tocytoplasmic stress granule (SG) and P-body (PB) in response tostress (PubMed:21964062). {ECO:0000269|PubMed:17461779,ECO:0000269|PubMed:21964062, ECO:0000269|PubMed:22609986}. |
| Retention analysis result of each fusion partner protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at . * Minus value of BPloci means that the break pointn is located before the CDS. |
| - In-frame and retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
| - In-frame and not-retained protein feature among the 13 regional features. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Protein feature | Protein feature note |
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FusionGeneSequence for PRR5L_ITPA |
| For in-frame fusion transcripts, we provide the fusion transcript sequences and fusion amino acid sequences. (nt: nucleotides, aa: amino acids) |
| * Fusion amino acid sequences. |
| * Fusion transcript sequences (only coding sequence (CDS) region). |
| * Fusion transcript sequences (Full-length transcript). |
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FusionGenePPI for PRR5L_ITPA |
| Go to ChiPPI (Chimeric Protein-Protein interactions) to see the chimeric PPI interaction in . |
| Protein-protein interactors with each fusion partner protein in wild-type (BIOGRID-3.4.160) |
| Hgene | Hgene's interactors | Tgene | Tgene's interactors |
| PRR5L | RICTOR, MTOR, MAPKAP1, ZFP36 | ITPA | ENO1, GLO1, ITPA, SHMT2, MOV10, NXF1, EGFR, TSHR, SERPINB11, WNT4, VPS4B, ECHS1, C9orf64, FKBP1B, FKBP2, GALE, GGCT, GRPEL1, HNRNPA1, HNRNPA2B1, HNRNPA3, HSPA9, HSPB1, IMPA2, NSFL1C, PARK7, PDCD6, PPA1, PPIH, SERPINB1, SERPINB2, SERPINB5, SERPINB6, SERPINB8, SHMT1, TKT, UMPS, WDR1, PDXK, PSMG4, SSNA1, STIP1, TES, UBE2V1, TMEM189-UBE2V1, FAM3B, P2RX5, HTR2C, CCL22, FGB, TOR1AIP2, FERMT1, ADAMTS4 |
| - Retained PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Still interaction with |
| - Lost PPIs in in-frame fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
| - Retained PPIs, but lost function due to frame-shift fusion. |
| Partner | Gene | Hbp | Tbp | ENST | Strand | BPexon | TotalExon | Protein feature loci | *BPloci | TotalLen | Interaction lost with |
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RelatedDrugs for PRR5L_ITPA |
| Drugs targeting genes involved in this fusion gene. (DrugBank Version 5.1.0 2018-04-02) |
| Partner | Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
| Tgene | ITPA | Q9BY32 | DB04272 | Citric Acid | Inosine triphosphate pyrophosphatase {ECO:0000255|HAMAP-Rule:MF_03148} | small molecule | approved|nutraceutical|vet_approved |
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RelatedDiseases for PRR5L_ITPA |
| Diseases associated with fusion partners. (DisGeNet 4.0) |
| Partner | Gene | Disease ID | Disease name | # pubmeds | Source |
| Tgene | ITPA | C0025521 | Inborn Errors of Metabolism | 2 | CTD_human |
| Tgene | ITPA | C0002878 | Anemia, Hemolytic | 1 | CTD_human |
| Tgene | ITPA | C0040034 | Thrombocytopenia | 1 | CTD_human |
| Tgene | ITPA | C0342800 | Inosine Triphosphatase Deficiency | 1 | UNIPROT |
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